RNA–Protein interactions for RNA: ENST00000574408.5

USP43-205, Transcript of ubiquitin specific peptidase 43, humanhuman

TSL 1 (best)

Gene USP43, Length 3,425 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-205ENST00000574408 ATP5G1P05496 136 aa7.29□□□□□ -1.24
USP43-205ENST00000574408 FAM236AA0A1B0GUQ0 79 aa7.28□□□□□ -1.24
USP43-205ENST00000574408 FAM236BA0A1B0GV22 79 aa7.28□□□□□ -1.24
USP43-205ENST00000574408 SPART-AS1P0CW21 52 aa7.28□□□□□ -1.24
USP43-205ENST00000574408 FBN1P35555 2871 aaKnown RBP7.28□□□□□ -1.24
USP43-205ENST00000574408 Q9HAA7 133 aa7.27□□□□□ -1.24
USP43-205ENST00000574408 COL6A5A8TX70 2615 aa7.27□□□□□ -1.25
USP43-205ENST00000574408 CYSRT1A8MQ03 144 aa7.27□□□□□ -1.25
USP43-205ENST00000574408 MIAQ16674 131 aa7.27□□□□□ -1.25
USP43-205ENST00000574408 SPANXDQ9BXN6 97 aa7.27□□□□□ -1.25
USP43-205ENST00000574408 SPANXCQ9NY87 97 aa7.27□□□□□ -1.25
USP43-205ENST00000574408 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.27□□□□□ -1.25
USP43-205ENST00000574408 EIF4EBP3O60516 100 aaPredicted RBP7.27□□□□□ -1.25
USP43-205ENST00000574408 PRIMA1Q86XR5 153 aa7.26□□□□□ -1.25
USP43-205ENST00000574408 C9orf153Q5TBE3 101 aa7.26□□□□□ -1.25
USP43-205ENST00000574408 RETNQ9HD89 108 aa7.26□□□□□ -1.25
USP43-205ENST00000574408 CIRBPQ14011 172 aaKnown RBP7.26□□□□□ -1.25
USP43-205ENST00000574408 CLPSL2Q6UWE3 100 aa7.26□□□□□ -1.25
USP43-205ENST00000574408 ICOSQ9Y6W8 199 aa7.26□□□□□ -1.25
USP43-205ENST00000574408 A0A0B4J2C4 111 aa7.25□□□□□ -1.25
USP43-205ENST00000574408 TIMM17BO60830 172 aa7.25□□□□□ -1.25
USP43-205ENST00000574408 KLK5Q9Y337 293 aaPredicted RBP7.25□□□□□ -1.25
USP43-205ENST00000574408 NOTCH1P46531 2555 aa7.25□□□□□ -1.25
USP43-205ENST00000574408 IGKV3D-7A0A0C4DH55 119 aa7.24□□□□□ -1.25
USP43-205ENST00000574408 LINC00959A0A1B0GUT2 108 aa7.24□□□□□ -1.25
USP43-205ENST00000574408 C5orf38Q86SI9 138 aa7.24□□□□□ -1.25
USP43-205ENST00000574408 PKD1L1Q8TDX9 2849 aa7.24□□□□□ -1.25
USP43-205ENST00000574408 IGHV3OR16-9A0A0B4J2B5 98 aa7.24□□□□□ -1.25
USP43-205ENST00000574408 A0A1B0GUV1 79 aa7.24□□□□□ -1.25
USP43-205ENST00000574408 PFN2P35080 140 aa7.24□□□□□ -1.25
USP43-205ENST00000574408 EGFEM1PQ0D2K5 195 aa7.24□□□□□ -1.25
USP43-205ENST00000574408 COX7B2Q8TF08 81 aa7.23□□□□□ -1.25
USP43-205ENST00000574408 XCL1P47992 114 aa7.23□□□□□ -1.25
USP43-205ENST00000574408 HIST1H4AP62805 103 aaKnown RBP7.23□□□□□ -1.25
USP43-205ENST00000574408 DNAL4O96015 105 aa7.23□□□□□ -1.25
USP43-205ENST00000574408 Q8N3U1 123 aa7.22□□□□□ -1.25
USP43-205ENST00000574408 A0A087WZ39 114 aa7.22□□□□□ -1.25
USP43-205ENST00000574408 TRBV10-2A0A0K0K1G8 114 aa7.22□□□□□ -1.25
USP43-205ENST00000574408 SS18Q15532 418 aa7.22□□□□□ -1.25
USP43-205ENST00000574408 LINC00158P58513 81 aa7.21□□□□□ -1.25
USP43-205ENST00000574408 LINC00269Q8N2A0 174 aa7.21□□□□□ -1.26
USP43-205ENST00000574408 LINC00308Q8TCZ7 52 aa7.21□□□□□ -1.26
USP43-205ENST00000574408 M0QXV9 152 aa7.21□□□□□ -1.26
USP43-205ENST00000574408 PPDPFQ9H3Y8 114 aa7.21□□□□□ -1.26
USP43-205ENST00000574408 ANGP03950 147 aaKnown RBP7.2□□□□□ -1.26
USP43-205ENST00000574408 BAALC-AS2P0C853 105 aa7.2□□□□□ -1.26
USP43-205ENST00000574408 LOC107984640A0A0U1RRK4 108 aa7.2□□□□□ -1.26
USP43-205ENST00000574408 NHLRC4P0CG21 123 aaPredicted RBP7.2□□□□□ -1.26
USP43-205ENST00000574408 SOSTDC1Q6X4U4 206 aa7.19□□□□□ -1.26
USP43-205ENST00000574408 IGLV10-54A0A075B6I4 117 aa7.19□□□□□ -1.26
USP43-205ENST00000574408 TENM3Q9P273 2699 aa7.19□□□□□ -1.26
USP43-205ENST00000574408 LELP1Q5T871 98 aa7.18□□□□□ -1.26
USP43-205ENST00000574408 SDIM1Q6ZPB5 146 aa7.18□□□□□ -1.26
USP43-205ENST00000574408 CMYA5Q8N3K9 4069 aa7.18□□□□□ -1.26
USP43-205ENST00000574408 SLPIP03973 132 aa7.18□□□□□ -1.26
USP43-205ENST00000574408 REG3AQ06141 175 aa7.18□□□□□ -1.26
USP43-205ENST00000574408 COPS9Q8WXC6 57 aa7.18□□□□□ -1.26
USP43-205ENST00000574408 C6orf226Q5I0X4 101 aa7.17□□□□□ -1.26
USP43-205ENST00000574408 Q6ZTC4 211 aa7.17□□□□□ -1.26
USP43-205ENST00000574408 MIR7-3HGQ8N6C7 128 aa7.17□□□□□ -1.26
USP43-205ENST00000574408 CHCHD10Q8WYQ3 142 aaPredicted RBP7.17□□□□□ -1.26
USP43-205ENST00000574408 PRB2P02812 416 aaPredicted RBP7.16□□□□□ -1.26
USP43-205ENST00000574408 ANK2Q01484 3957 aa7.16□□□□□ -1.26
USP43-205ENST00000574408 TRBV30A0A0K0K1B3 111 aa7.16□□□□□ -1.26
USP43-205ENST00000574408 CD164L2Q6UWJ8 174 aa7.16□□□□□ -1.26
USP43-205ENST00000574408 C14orf132Q9NPU4 83 aa7.16□□□□□ -1.26
USP43-205ENST00000574408 A0A0J9YWU9 116 aa7.15□□□□□ -1.26
USP43-205ENST00000574408 KPRPQ5T749 579 aaPredicted RBP7.15□□□□□ -1.26
USP43-205ENST00000574408 MGAM2Q2M2H8 2515 aa7.15□□□□□ -1.26
USP43-205ENST00000574408 COX7A2LO14548 114 aa7.15□□□□□ -1.26
USP43-205ENST00000574408 LYPD5Q6UWN5 251 aa7.15□□□□□ -1.26
USP43-205ENST00000574408 NBEAL1Q6ZS30 2694 aa7.15□□□□□ -1.26
USP43-205ENST00000574408 KLK12Q9UKR0 248 aa7.15□□□□□ -1.27
USP43-205ENST00000574408 A0A087WVE0 104 aa7.14□□□□□ -1.27
USP43-205ENST00000574408 hADV29S1A0JD25 119 aa7.14□□□□□ -1.27
USP43-205ENST00000574408 IBA57-AS1B1ANH7 110 aa7.14□□□□□ -1.27
USP43-205ENST00000574408 Q8IZM0 81 aa7.14□□□□□ -1.27
USP43-205ENST00000574408 MALP21145 153 aa7.14□□□□□ -1.27
USP43-205ENST00000574408 NANOS2P60321 138 aaKnown RBP7.14□□□□□ -1.27
USP43-205ENST00000574408 CRPP02741 224 aa7.13□□□□□ -1.27
USP43-205ENST00000574408 LINC01561Q8N1V8 128 aa7.13□□□□□ -1.27
USP43-205ENST00000574408 SND1-IT1Q9HBX3 110 aa7.12□□□□□ -1.27
USP43-205ENST00000574408 A0A1B0GX51 115 aa7.12□□□□□ -1.27
USP43-205ENST00000574408 H3BNG1 76 aa7.12□□□□□ -1.27
USP43-205ENST00000574408 C11orf45Q8TAV5 145 aa7.12□□□□□ -1.27
USP43-205ENST00000574408 CCL18P55774 89 aa7.11□□□□□ -1.27
USP43-205ENST00000574408 DNAH3Q8TD57 4116 aa7.11□□□□□ -1.27
USP43-205ENST00000574408 WFDC10BQ8IUB3 73 aa7.11□□□□□ -1.27
USP43-205ENST00000574408 DEFB131BA0A096LNP1 70 aa7.11□□□□□ -1.27
USP43-205ENST00000574408 KIAA0087Q14695 138 aa7.11□□□□□ -1.27
USP43-205ENST00000574408 NCR3O14931 201 aa7.1□□□□□ -1.27
USP43-205ENST00000574408 LECT2O14960 151 aa7.1□□□□□ -1.27
USP43-205ENST00000574408 PRR34Q9NV39 138 aa7.1□□□□□ -1.27
USP43-205ENST00000574408 LST1O00453 97 aa7.1□□□□□ -1.27
USP43-205ENST00000574408 ENHOQ6UWT2 76 aa7.1□□□□□ -1.27
USP43-205ENST00000574408 MRAPQ8TCY5 172 aa7.1□□□□□ -1.27
USP43-205ENST00000574408 H3BT86 120 aa7.09□□□□□ -1.27
USP43-205ENST00000574408 DEFB121Q5J5C9 76 aa7.09□□□□□ -1.27
USP43-205ENST00000574408 LINC00337Q8N6G1 96 aa7.09□□□□□ -1.27
USP43-205ENST00000574408 IGKV2-28A0A075B6P5 120 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms