RNA–Protein interactions for RNA: ENST00000573519.5

NPLOC4-213, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 1 (best)

Gene NPLOC4, Length 654 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-213ENST00000573519 YPEL4Q96NS1 127 aa7.86□□□□□ -1.15
NPLOC4-213ENST00000573519 GEMIN7Q9H840 131 aaKnown RBP7.86□□□□□ -1.15
NPLOC4-213ENST00000573519 FAM168BA1KXE4 195 aa7.85□□□□□ -1.15
NPLOC4-213ENST00000573519 TLX1NBP0CAT3 122 aa7.85□□□□□ -1.15
NPLOC4-213ENST00000573519 C1orf137Q5JT78 98 aa7.85□□□□□ -1.15
NPLOC4-213ENST00000573519 CBLN2Q8IUK8 224 aa7.85□□□□□ -1.15
NPLOC4-213ENST00000573519 LINC01561Q8N1V8 128 aa7.85□□□□□ -1.15
NPLOC4-213ENST00000573519 CDKN2A-AS1Q9UH64 79 aa7.85□□□□□ -1.15
NPLOC4-213ENST00000573519 PSORS1C2Q9UIG4 136 aa7.85□□□□□ -1.15
NPLOC4-213ENST00000573519 TRBV30A0A0K0K1B3 111 aa7.84□□□□□ -1.15
NPLOC4-213ENST00000573519 HERVK_113P63121 156 aa7.84□□□□□ -1.15
NPLOC4-213ENST00000573519 SEC11AP67812 179 aa7.84□□□□□ -1.15
NPLOC4-213ENST00000573519 PMCHL1Q16048 86 aa7.84□□□□□ -1.15
NPLOC4-213ENST00000573519 LINC00469Q8N7U9 141 aa7.84□□□□□ -1.15
NPLOC4-213ENST00000573519 LINC01600Q96MT4 127 aa7.84□□□□□ -1.15
NPLOC4-213ENST00000573519 CST9LQ9H4G1 147 aa7.84□□□□□ -1.15
NPLOC4-213ENST00000573519 HMCN2Q8NDA2 5059 aa7.84□□□□□ -1.15
NPLOC4-213ENST00000573519 A0A096LNJ9 63 aa7.83□□□□□ -1.16
NPLOC4-213ENST00000573519 LINC00614P0C842 121 aa7.83□□□□□ -1.16
NPLOC4-213ENST00000573519 CKS1BP61024 79 aa7.83□□□□□ -1.16
NPLOC4-213ENST00000573519 SRSF9Q13242 221 aaKnown RBP eCLIP7.83□□□□□ -1.16
NPLOC4-213ENST00000573519 C6orf226Q5I0X4 101 aa7.83□□□□□ -1.16
NPLOC4-213ENST00000573519 LINC01549A6NIU2 74 aa7.82□□□□□ -1.16
NPLOC4-213ENST00000573519 PMVKQ15126 192 aa7.82□□□□□ -1.16
NPLOC4-213ENST00000573519 TINCRA0A1B0GVN0 87 aa7.81□□□□□ -1.16
NPLOC4-213ENST00000573519 NDUFC2-KCTD14E9PQ53 114 aa7.81□□□□□ -1.16
NPLOC4-213ENST00000573519 NDUFA6P56556 154 aa7.81□□□□□ -1.16
NPLOC4-213ENST00000573519 Q8IZM0 81 aa7.81□□□□□ -1.16
NPLOC4-213ENST00000573519 SMIM1B2RUZ4 78 aa7.8□□□□□ -1.16
NPLOC4-213ENST00000573519 M0QXV9 152 aa7.8□□□□□ -1.16
NPLOC4-213ENST00000573519 HBDP02042 147 aa7.8□□□□□ -1.16
NPLOC4-213ENST00000573519 UBE2BP63146 152 aa7.8□□□□□ -1.16
NPLOC4-213ENST00000573519 IGLV5-45A0A087WSX0 123 aa7.79□□□□□ -1.16
NPLOC4-213ENST00000573519 SPINK8P0C7L1 97 aa7.79□□□□□ -1.16
NPLOC4-213ENST00000573519 RAB5BP61020 215 aa7.79□□□□□ -1.16
NPLOC4-213ENST00000573519 ODF1Q14990 250 aa7.79□□□□□ -1.16
NPLOC4-213ENST00000573519 PDZD11Q5EBL8 140 aa7.79□□□□□ -1.16
NPLOC4-213ENST00000573519 C9orf129Q5T035 196 aaKnown RBP7.79□□□□□ -1.16
NPLOC4-213ENST00000573519 IGLV7-43P04211 117 aa7.78□□□□□ -1.16
NPLOC4-213ENST00000573519 KRTAP11-1Q8IUC1 163 aa7.78□□□□□ -1.16
NPLOC4-213ENST00000573519 F8VRH5 84 aa7.77□□□□□ -1.17
NPLOC4-213ENST00000573519 KRTAP7-1Q8IUC3 87 aa7.77□□□□□ -1.17
NPLOC4-213ENST00000573519 COX7B2Q8TF08 81 aa7.77□□□□□ -1.17
NPLOC4-213ENST00000573519 TRGC2P03986 189 aa7.76□□□□□ -1.17
NPLOC4-213ENST00000573519 IGLC3P0DOY3 106 aa7.76□□□□□ -1.17
NPLOC4-213ENST00000573519 KRTAP10-8P60410 259 aa7.76□□□□□ -1.17
NPLOC4-213ENST00000573519 XAGE1AQ9HD64 81 aa7.76□□□□□ -1.17
NPLOC4-213ENST00000573519 TNXBP22105 4242 aa7.76□□□□□ -1.17
NPLOC4-213ENST00000573519 ATP5LO75964 103 aa7.75□□□□□ -1.17
NPLOC4-213ENST00000573519 CXCL5P42830 114 aa7.75□□□□□ -1.17
NPLOC4-213ENST00000573519 BAGE3Q86Y29 109 aa7.75□□□□□ -1.17
NPLOC4-213ENST00000573519 DIRC1Q969H9 104 aa7.75□□□□□ -1.17
NPLOC4-213ENST00000573519 H3BRM9 83 aa7.74□□□□□ -1.17
NPLOC4-213ENST00000573519 ZNF22P17026 224 aaPredicted RBP7.74□□□□□ -1.17
NPLOC4-213ENST00000573519 CHCHD1Q96BP2 118 aaKnown RBP7.74□□□□□ -1.17
NPLOC4-213ENST00000573519 C11orf86A6NJI1 115 aa7.73□□□□□ -1.17
NPLOC4-213ENST00000573519 FAM19A2Q8N3H0 131 aa7.73□□□□□ -1.17
NPLOC4-213ENST00000573519 C22orf24Q9Y442 160 aa7.73□□□□□ -1.17
NPLOC4-213ENST00000573519 COLCA2A8K830 154 aa7.72□□□□□ -1.17
NPLOC4-213ENST00000573519 H0Y9J4 135 aa7.72□□□□□ -1.17
NPLOC4-213ENST00000573519 UBR4Q5T4S7 5183 aa7.71□□□□□ -1.17
NPLOC4-213ENST00000573519 IGLV5-39A0A0G2JS06 123 aa7.71□□□□□ -1.18
NPLOC4-213ENST00000573519 LBHQ53QV2 105 aaPredicted RBP7.71□□□□□ -1.18
NPLOC4-213ENST00000573519 TMEM170BQ5T4T1 132 aa7.71□□□□□ -1.18
NPLOC4-213ENST00000573519 IFI27L1Q96BM0 104 aa7.71□□□□□ -1.18
NPLOC4-213ENST00000573519 CHTOPQ9Y3Y2 248 aaKnown RBP7.71□□□□□ -1.18
NPLOC4-213ENST00000573519 HSBP1O75506 76 aa7.7□□□□□ -1.18
NPLOC4-213ENST00000573519 SCO1O75880 301 aa7.7□□□□□ -1.18
NPLOC4-213ENST00000573519 PRR26Q8N8Z3 221 aa7.7□□□□□ -1.18
NPLOC4-213ENST00000573519 SERF1AO75920 110 aa7.69□□□□□ -1.18
NPLOC4-213ENST00000573519 LINC00310P59036 64 aa7.69□□□□□ -1.18
NPLOC4-213ENST00000573519 TRAV12-1A0A0B4J245 112 aa7.68□□□□□ -1.18
NPLOC4-213ENST00000573519 H0Y8G0 127 aa7.68□□□□□ -1.18
NPLOC4-213ENST00000573519 NUPR1O60356 82 aa7.68□□□□□ -1.18
NPLOC4-213ENST00000573519 MRPL55Q7Z7F7 128 aaKnown RBP7.68□□□□□ -1.18
NPLOC4-213ENST00000573519 PFN2P35080 140 aa7.67□□□□□ -1.18
NPLOC4-213ENST00000573519 ZNF625Q96I27 306 aaPredicted RBP7.67□□□□□ -1.18
NPLOC4-213ENST00000573519 GAGE10A6NGK3 116 aa7.66□□□□□ -1.18
NPLOC4-213ENST00000573519 RPL37AP8A6NKH3 93 aa7.66□□□□□ -1.18
NPLOC4-213ENST00000573519 TP73-AS1Q9UF72 201 aa7.66□□□□□ -1.18
NPLOC4-213ENST00000573519 TMEM223A0PJW6 202 aa7.65□□□□□ -1.18
NPLOC4-213ENST00000573519 ZNF861PO60384 105 aa7.65□□□□□ -1.18
NPLOC4-213ENST00000573519 LEPROTL1O95214 131 aa7.65□□□□□ -1.18
NPLOC4-213ENST00000573519 FABP4P15090 132 aa7.65□□□□□ -1.18
NPLOC4-213ENST00000573519 NKAPP1Q8N9T2 125 aa7.65□□□□□ -1.18
NPLOC4-213ENST00000573519 LINC00167Q96N53 147 aa7.65□□□□□ -1.18
NPLOC4-213ENST00000573519 KRTAP1-4P0C5Y4 121 aa7.64□□□□□ -1.19
NPLOC4-213ENST00000573519 ERG28Q9UKR5 140 aa7.64□□□□□ -1.19
NPLOC4-213ENST00000573519 IGLV1-50A0A075B6I6 118 aa7.63□□□□□ -1.19
NPLOC4-213ENST00000573519 BCE1O60756 84 aa7.63□□□□□ -1.19
NPLOC4-213ENST00000573519 RPL28P46779 137 aaKnown RBP7.62□□□□□ -1.19
NPLOC4-213ENST00000573519 A0A0U1RRA0 63 aa7.61□□□□□ -1.19
NPLOC4-213ENST00000573519 PMCHL2Q9BQD1 86 aa7.61□□□□□ -1.19
NPLOC4-213ENST00000573519 SND1-IT1Q9HBX3 110 aa7.61□□□□□ -1.19
NPLOC4-213ENST00000573519 HSPB8Q9UJY1 196 aa7.61□□□□□ -1.19
NPLOC4-213ENST00000573519 IGLV5-37A0A075B6J1 123 aa7.6□□□□□ -1.19
NPLOC4-213ENST00000573519 IGKV2-28A0A075B6P5 120 aa7.6□□□□□ -1.19
NPLOC4-213ENST00000573519 IGKV2D-28P01615 120 aa7.6□□□□□ -1.19
NPLOC4-213ENST00000573519 RPL13AP40429 203 aaKnown RBP7.6□□□□□ -1.19
NPLOC4-213ENST00000573519 HIST1H2BKO60814 126 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms