RNA–Protein interactions for RNA: ENST00000572503.1

NDE1-204, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 2

Gene NDE1, Length 285 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-204ENST00000572503 MUSTN1Q8IVN3 82 aa3.14□□□□□ -1.91
NDE1-204ENST00000572503 LINC00269Q8N2A0 174 aa3.14□□□□□ -1.91
NDE1-204ENST00000572503 C11orf45Q8TAV5 145 aa3.14□□□□□ -1.91
NDE1-204ENST00000572503 COX7B2Q8TF08 81 aa3.14□□□□□ -1.91
NDE1-204ENST00000572503 Q9H8V8 135 aa3.14□□□□□ -1.91
NDE1-204ENST00000572503 DNAH17Q9UFH2 4485 aa3.13□□□□□ -1.91
NDE1-204ENST00000572503 TRAV10A0A0B4J240 114 aa3.13□□□□□ -1.91
NDE1-204ENST00000572503 TMEM238LA0A1B0GVL6 79 aa3.13□□□□□ -1.91
NDE1-204ENST00000572503 A6NJY4 79 aa3.13□□□□□ -1.91
NDE1-204ENST00000572503 TMEM262E9PQX1 116 aa3.13□□□□□ -1.91
NDE1-204ENST00000572503 H3BUT2 72 aa3.13□□□□□ -1.91
NDE1-204ENST00000572503 K7EP34 96 aa3.13□□□□□ -1.91
NDE1-204ENST00000572503 TSPAN13O95857 204 aa3.13□□□□□ -1.91
NDE1-204ENST00000572503 IGHV3-33P01772 117 aa3.13□□□□□ -1.91
NDE1-204ENST00000572503 HERV-K104P63124 156 aa3.13□□□□□ -1.91
NDE1-204ENST00000572503 REG3AQ06141 175 aa3.13□□□□□ -1.91
NDE1-204ENST00000572503 SRSF9Q13242 221 aaKnown RBP eCLIP3.13□□□□□ -1.91
NDE1-204ENST00000572503 SS18Q15532 418 aa3.13□□□□□ -1.91
NDE1-204ENST00000572503 LINC01556Q5JQF7 62 aa3.13□□□□□ -1.91
NDE1-204ENST00000572503 CLPSL2Q6UWE3 100 aa3.13□□□□□ -1.91
NDE1-204ENST00000572503 C5orf38Q86SI9 138 aa3.13□□□□□ -1.91
NDE1-204ENST00000572503 Q8IZM0 81 aa3.13□□□□□ -1.91
NDE1-204ENST00000572503 CHCHD10Q8WYQ3 142 aaPredicted RBP3.13□□□□□ -1.91
NDE1-204ENST00000572503 RAB37Q96AX2 223 aa3.13□□□□□ -1.91
NDE1-204ENST00000572503 B9D2Q9BPU9 175 aa3.13□□□□□ -1.91
NDE1-204ENST00000572503 NAA38Q9BRA0 125 aaKnown RBP3.13□□□□□ -1.91
NDE1-204ENST00000572503 LYSTQ99698 3801 aa3.13□□□□□ -1.91
NDE1-204ENST00000572503 DNAH2Q9P225 4427 aa3.13□□□□□ -1.91
NDE1-204ENST00000572503 TENM2Q9NT68 2774 aa3.12□□□□□ -1.91
NDE1-204ENST00000572503 IGKV3OR2-268A0A0C4DH90 116 aa3.12□□□□□ -1.91
NDE1-204ENST00000572503 LOC107984156A0A0G2JMH3 177 aa3.12□□□□□ -1.91
NDE1-204ENST00000572503 ANGP03950 147 aaKnown RBP3.12□□□□□ -1.91
NDE1-204ENST00000572503 DNAH10OSP0CZ25 163 aa3.12□□□□□ -1.91
NDE1-204ENST00000572503 XCL1P47992 114 aa3.12□□□□□ -1.91
NDE1-204ENST00000572503 RPL24P83731 157 aaKnown RBP3.12□□□□□ -1.91
NDE1-204ENST00000572503 KRTAP21-3Q3LHN1 58 aa3.12□□□□□ -1.91
NDE1-204ENST00000572503 ARL17AQ8IVW1 177 aa3.12□□□□□ -1.91
NDE1-204ENST00000572503 C15orf53Q8NAA6 179 aa3.12□□□□□ -1.91
NDE1-204ENST00000572503 LINC00308Q8TCZ7 52 aa3.12□□□□□ -1.91
NDE1-204ENST00000572503 KLK5Q9Y337 293 aaPredicted RBP3.12□□□□□ -1.91
NDE1-204ENST00000572503 ALMS1Q8TCU4 4167 aa3.12□□□□□ -1.91
NDE1-204ENST00000572503 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.11□□□□□ -1.91
NDE1-204ENST00000572503 TRAV8-4A0A0B4J246 113 aa3.11□□□□□ -1.91
NDE1-204ENST00000572503 GAGE12HA6NDE8 117 aa3.11□□□□□ -1.91
NDE1-204ENST00000572503 IBA57-AS1B1ANH7 110 aa3.11□□□□□ -1.91
NDE1-204ENST00000572503 COX7A2LO14548 114 aa3.11□□□□□ -1.91
NDE1-204ENST00000572503 APOMO95445 188 aa3.11□□□□□ -1.91
NDE1-204ENST00000572503 VAMP3Q15836 100 aa3.11□□□□□ -1.91
NDE1-204ENST00000572503 SFTA2Q6UW10 78 aa3.11□□□□□ -1.91
NDE1-204ENST00000572503 DAND5Q8N907 189 aa3.11□□□□□ -1.91
NDE1-204ENST00000572503 MRAPQ8TCY5 172 aa3.11□□□□□ -1.91
NDE1-204ENST00000572503 UPK3BQ9BT76 320 aa3.11□□□□□ -1.91
NDE1-204ENST00000572503 PGPEP1Q9NXJ5 209 aa3.11□□□□□ -1.91
NDE1-204ENST00000572503 PRO1854Q9UHT4 67 aa3.11□□□□□ -1.91
NDE1-204ENST00000572503 PRO0461Q9UI25 63 aa3.11□□□□□ -1.91
NDE1-204ENST00000572503 KLK12Q9UKR0 248 aa3.11□□□□□ -1.91
NDE1-204ENST00000572503 FBN3Q75N90 2809 aa3.11□□□□□ -1.91
NDE1-204ENST00000572503 IGLV10-54A0A075B6I4 117 aa3.1□□□□□ -1.91
NDE1-204ENST00000572503 GVQW2A0A096LPI5 108 aaPredicted RBP3.1□□□□□ -1.91
NDE1-204ENST00000572503 FABP2P12104 132 aa3.1□□□□□ -1.91
NDE1-204ENST00000572503 CXCL5P42830 114 aa3.1□□□□□ -1.91
NDE1-204ENST00000572503 CCL18P55774 89 aa3.1□□□□□ -1.91
NDE1-204ENST00000572503 DEFB121Q5J5C9 76 aa3.1□□□□□ -1.91
NDE1-204ENST00000572503 C15orf56Q8N910 161 aa3.1□□□□□ -1.91
NDE1-204ENST00000572503 LINC00588Q9Y4M8 146 aa3.1□□□□□ -1.91
NDE1-204ENST00000572503 SPCS1Q9Y6A9 102 aa3.1□□□□□ -1.91
NDE1-204ENST00000572503 HECTD4Q9Y4D8 3996 aa3.1□□□□□ -1.91
NDE1-204ENST00000572503 IGKV2-28A0A075B6P5 120 aa3.09□□□□□ -1.91
NDE1-204ENST00000572503 TRBV30A0A0K0K1B3 111 aa3.09□□□□□ -1.91
NDE1-204ENST00000572503 GAGE10A6NGK3 116 aa3.09□□□□□ -1.91
NDE1-204ENST00000572503 IGKV2D-28P01615 120 aa3.09□□□□□ -1.91
NDE1-204ENST00000572503 CIRBPQ14011 172 aaKnown RBP3.09□□□□□ -1.91
NDE1-204ENST00000572503 C10orf25Q5T742 122 aa3.09□□□□□ -1.91
NDE1-204ENST00000572503 C2orf82Q6UX34 121 aa3.09□□□□□ -1.91
NDE1-204ENST00000572503 GTF2H5Q6ZYL4 71 aa3.09□□□□□ -1.91
NDE1-204ENST00000572503 MIR7-3HGQ8N6C7 128 aa3.09□□□□□ -1.91
NDE1-204ENST00000572503 NTN5Q8WTR8 489 aaPredicted RBP3.09□□□□□ -1.91
NDE1-204ENST00000572503 UBE2WQ96B02 151 aa3.09□□□□□ -1.91
NDE1-204ENST00000572503 LINC01600Q96MT4 127 aa3.09□□□□□ -1.91
NDE1-204ENST00000572503 TOMM7Q9P0U1 55 aa3.09□□□□□ -1.91
NDE1-204ENST00000572503 ERG28Q9UKR5 140 aa3.09□□□□□ -1.91
NDE1-204ENST00000572503 APLNQ9ULZ1 77 aa3.09□□□□□ -1.91
NDE1-204ENST00000572503 A0A0U1RRA0 63 aa3.08□□□□□ -1.92
NDE1-204ENST00000572503 TRIAP1O43715 76 aa3.08□□□□□ -1.92
NDE1-204ENST00000572503 TCL1BO95988 128 aa3.08□□□□□ -1.92
NDE1-204ENST00000572503 PRSS2P07478 247 aa3.08□□□□□ -1.92
NDE1-204ENST00000572503 NHLRC4P0CG21 123 aaPredicted RBP3.08□□□□□ -1.92
NDE1-204ENST00000572503 NPC2P61916 151 aa3.08□□□□□ -1.92
NDE1-204ENST00000572503 SPAG11BQ08648 103 aa3.08□□□□□ -1.92
NDE1-204ENST00000572503 COX17Q14061 63 aa3.08□□□□□ -1.92
NDE1-204ENST00000572503 C6orf226Q5I0X4 101 aa3.08□□□□□ -1.92
NDE1-204ENST00000572503 MEIG1Q5JSS6 88 aa3.08□□□□□ -1.92
NDE1-204ENST00000572503 C6orf223Q8N319 242 aa3.08□□□□□ -1.92
NDE1-204ENST00000572503 LINC00337Q8N6G1 96 aa3.08□□□□□ -1.92
NDE1-204ENST00000572503 Q8NDZ9 215 aa3.08□□□□□ -1.92
NDE1-204ENST00000572503 MUC7Q8TAX7 377 aa3.08□□□□□ -1.92
NDE1-204ENST00000572503 COPS9Q8WXC6 57 aa3.08□□□□□ -1.92
NDE1-204ENST00000572503 DNAH11Q96DT5 4516 aa3.07□□□□□ -1.92
NDE1-204ENST00000572503 CRPP02741 224 aa3.07□□□□□ -1.92
NDE1-204ENST00000572503 RPL13AP40429 203 aaKnown RBP3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms