RNA–Protein interactions for RNA: ENST00000571346.1

PRPF8-202, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 865 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-202ENST00000571346 SCGB3A1Q96QR1 104 aa8.36□□□□□ -1.07
PRPF8-202ENST00000571346 ALKBH7Q9BT30 221 aaPredicted RBP8.36□□□□□ -1.07
PRPF8-202ENST00000571346 SEC11CQ9BY50 192 aa8.36□□□□□ -1.07
PRPF8-202ENST00000571346 CDKN2A-AS1Q9UH64 79 aa8.36□□□□□ -1.07
PRPF8-202ENST00000571346 C6orf226Q5I0X4 101 aa8.35□□□□□ -1.07
PRPF8-202ENST00000571346 C9orf129Q5T035 196 aaKnown RBP8.35□□□□□ -1.07
PRPF8-202ENST00000571346 Q8IZM0 81 aa8.35□□□□□ -1.07
PRPF8-202ENST00000571346 LINC00469Q8N7U9 141 aa8.35□□□□□ -1.07
PRPF8-202ENST00000571346 IGLV7-43P04211 117 aa8.34□□□□□ -1.07
PRPF8-202ENST00000571346 FAM19A3Q7Z5A8 133 aa8.34□□□□□ -1.07
PRPF8-202ENST00000571346 KRTAP11-1Q8IUC1 163 aa8.34□□□□□ -1.07
PRPF8-202ENST00000571346 GNB1LQ9BYB4 327 aa8.34□□□□□ -1.07
PRPF8-202ENST00000571346 KRTAP10-8P60410 259 aa8.33□□□□□ -1.08
PRPF8-202ENST00000571346 ERASQ7Z444 233 aa8.33□□□□□ -1.08
PRPF8-202ENST00000571346 KRTAP7-1Q8IUC3 87 aa8.33□□□□□ -1.08
PRPF8-202ENST00000571346 DIRC1Q969H9 104 aa8.33□□□□□ -1.08
PRPF8-202ENST00000571346 SMCO4Q9NRQ5 59 aa8.33□□□□□ -1.08
PRPF8-202ENST00000571346 FA2HQ7L5A8 372 aa8.32□□□□□ -1.08
PRPF8-202ENST00000571346 MRPL18Q9H0U6 180 aaKnown RBP8.32□□□□□ -1.08
PRPF8-202ENST00000571346 XAGE1AQ9HD64 81 aa8.32□□□□□ -1.08
PRPF8-202ENST00000571346 RNF213Q63HN8 5207 aa8.32□□□□□ -1.08
PRPF8-202ENST00000571346 F8VRH5 84 aa8.31□□□□□ -1.08
PRPF8-202ENST00000571346 FABP9Q0Z7S8 132 aa8.31□□□□□ -1.08
PRPF8-202ENST00000571346 RPS10P5Q9NQ39 176 aa8.31□□□□□ -1.08
PRPF8-202ENST00000571346 SMIM1B2RUZ4 78 aa8.3□□□□□ -1.08
PRPF8-202ENST00000571346 H0Y9J4 135 aa8.3□□□□□ -1.08
PRPF8-202ENST00000571346 CXCL5P42830 114 aa8.3□□□□□ -1.08
PRPF8-202ENST00000571346 RHEBQ15382 184 aa8.3□□□□□ -1.08
PRPF8-202ENST00000571346 COX19Q49B96 90 aa8.3□□□□□ -1.08
PRPF8-202ENST00000571346 TINCRA0A1B0GVN0 87 aa8.29□□□□□ -1.08
PRPF8-202ENST00000571346 TMA7Q9Y2S6 64 aaKnown RBP8.29□□□□□ -1.08
PRPF8-202ENST00000571346 LINC01549A6NIU2 74 aa8.28□□□□□ -1.08
PRPF8-202ENST00000571346 SPINK8P0C7L1 97 aa8.28□□□□□ -1.08
PRPF8-202ENST00000571346 PRR26Q8N8Z3 221 aa8.28□□□□□ -1.08
PRPF8-202ENST00000571346 COX7B2Q8TF08 81 aa8.28□□□□□ -1.08
PRPF8-202ENST00000571346 CST9LQ9H4G1 147 aa8.28□□□□□ -1.08
PRPF8-202ENST00000571346 LINC01546A6NGU7 62 aa8.27□□□□□ -1.09
PRPF8-202ENST00000571346 PMVKQ15126 192 aa8.27□□□□□ -1.09
PRPF8-202ENST00000571346 PDZD11Q5EBL8 140 aa8.27□□□□□ -1.09
PRPF8-202ENST00000571346 CARHSP1Q9Y2V2 147 aaKnown RBP8.27□□□□□ -1.09
PRPF8-202ENST00000571346 C22orf24Q9Y442 160 aa8.27□□□□□ -1.09
PRPF8-202ENST00000571346 IGLV5-45A0A087WSX0 123 aa8.26□□□□□ -1.09
PRPF8-202ENST00000571346 NDUFA6P56556 154 aa8.26□□□□□ -1.09
PRPF8-202ENST00000571346 H3BRM9 83 aa8.25□□□□□ -1.09
PRPF8-202ENST00000571346 LBHQ53QV2 105 aaPredicted RBP8.25□□□□□ -1.09
PRPF8-202ENST00000571346 C10orf91Q5T1B1 145 aa8.25□□□□□ -1.09
PRPF8-202ENST00000571346 RAB5BP61020 215 aa8.24□□□□□ -1.09
PRPF8-202ENST00000571346 MRPL55Q7Z7F7 128 aaKnown RBP8.24□□□□□ -1.09
PRPF8-202ENST00000571346 TRAPPC1Q9Y5R8 145 aa8.24□□□□□ -1.09
PRPF8-202ENST00000571346 NUPR1O60356 82 aa8.23□□□□□ -1.09
PRPF8-202ENST00000571346 APOC3P02656 99 aa8.23□□□□□ -1.09
PRPF8-202ENST00000571346 PMCHL1Q16048 86 aa8.23□□□□□ -1.09
PRPF8-202ENST00000571346 LPAP08519 4548 aa8.22□□□□□ -1.09
PRPF8-202ENST00000571346 ATP5LO75964 103 aa8.22□□□□□ -1.09
PRPF8-202ENST00000571346 HBDP02042 147 aa8.22□□□□□ -1.09
PRPF8-202ENST00000571346 KRTAP1-4P0C5Y4 121 aa8.22□□□□□ -1.09
PRPF8-202ENST00000571346 C18orf32Q8TCD1 76 aa8.22□□□□□ -1.09
PRPF8-202ENST00000571346 TP73-AS1Q9UF72 201 aa8.22□□□□□ -1.09
PRPF8-202ENST00000571346 IGLV1-50A0A075B6I6 118 aa8.21□□□□□ -1.1
PRPF8-202ENST00000571346 A0A096LNJ9 63 aa8.21□□□□□ -1.1
PRPF8-202ENST00000571346 GAGE10A6NGK3 116 aa8.21□□□□□ -1.1
PRPF8-202ENST00000571346 ZNF861PO60384 105 aa8.21□□□□□ -1.1
PRPF8-202ENST00000571346 IGLC3P0DOY3 106 aa8.21□□□□□ -1.1
PRPF8-202ENST00000571346 RPL37AP8A6NKH3 93 aa8.2□□□□□ -1.1
PRPF8-202ENST00000571346 LINC00614P0C842 121 aa8.2□□□□□ -1.1
PRPF8-202ENST00000571346 NKAPP1Q8N9T2 125 aa8.2□□□□□ -1.1
PRPF8-202ENST00000571346 URB1-AS1Q96HZ7 61 aa8.2□□□□□ -1.1
PRPF8-202ENST00000571346 SNAPINO95295 136 aa8.19□□□□□ -1.1
PRPF8-202ENST00000571346 ZNF22P17026 224 aaPredicted RBP8.19□□□□□ -1.1
PRPF8-202ENST00000571346 PFN2P35080 140 aa8.19□□□□□ -1.1
PRPF8-202ENST00000571346 RPL13AP40429 203 aaKnown RBP8.19□□□□□ -1.1
PRPF8-202ENST00000571346 SVBPQ8N300 66 aa8.19□□□□□ -1.1
PRPF8-202ENST00000571346 BCE1O60756 84 aa8.18□□□□□ -1.1
PRPF8-202ENST00000571346 LINC00167Q96N53 147 aa8.18□□□□□ -1.1
PRPF8-202ENST00000571346 IGLV5-39A0A0G2JS06 123 aa8.17□□□□□ -1.1
PRPF8-202ENST00000571346 RPL28P46779 137 aaKnown RBP8.17□□□□□ -1.1
PRPF8-202ENST00000571346 TMEM170BQ5T4T1 132 aa8.17□□□□□ -1.1
PRPF8-202ENST00000571346 C11orf86A6NJI1 115 aa8.16□□□□□ -1.1
PRPF8-202ENST00000571346 BAGE3Q86Y29 109 aa8.16□□□□□ -1.1
PRPF8-202ENST00000571346 ERG28Q9UKR5 140 aa8.16□□□□□ -1.1
PRPF8-202ENST00000571346 IGKV2-28A0A075B6P5 120 aa8.15□□□□□ -1.1
PRPF8-202ENST00000571346 SCO1O75880 301 aa8.15□□□□□ -1.1
PRPF8-202ENST00000571346 IGKV2D-28P01615 120 aa8.15□□□□□ -1.1
PRPF8-202ENST00000571346 UBE2AP49459 152 aa8.15□□□□□ -1.1
PRPF8-202ENST00000571346 ZNF625Q96I27 306 aaPredicted RBP8.15□□□□□ -1.1
PRPF8-202ENST00000571346 IGLV5-37A0A075B6J1 123 aa8.14□□□□□ -1.11
PRPF8-202ENST00000571346 SND1-IT1Q9HBX3 110 aa8.13□□□□□ -1.11
PRPF8-202ENST00000571346 CHTOPQ9Y3Y2 248 aaKnown RBP8.13□□□□□ -1.11
PRPF8-202ENST00000571346 A0A087X002 238 aa8.11□□□□□ -1.11
PRPF8-202ENST00000571346 VPREB1P12018 145 aa8.1□□□□□ -1.11
PRPF8-202ENST00000571346 COX17Q14061 63 aa8.1□□□□□ -1.11
PRPF8-202ENST00000571346 PRR4Q16378 134 aa8.1□□□□□ -1.11
PRPF8-202ENST00000571346 SFTA2Q6UW10 78 aa8.1□□□□□ -1.11
PRPF8-202ENST00000571346 CHCHD1Q96BP2 118 aaKnown RBP8.1□□□□□ -1.11
PRPF8-202ENST00000571346 PRLHP81277 87 aa8.09□□□□□ -1.11
PRPF8-202ENST00000571346 RPL24P83731 157 aaKnown RBP8.09□□□□□ -1.11
PRPF8-202ENST00000571346 CBLN2Q8IUK8 224 aa8.09□□□□□ -1.11
PRPF8-202ENST00000571346 IFI27L1Q96BM0 104 aa8.09□□□□□ -1.11
PRPF8-202ENST00000571346 YPEL4Q96NS1 127 aa8.09□□□□□ -1.11
PRPF8-202ENST00000571346 A0A0U1RRA0 63 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms