RNA–Protein interactions for RNA: ENST00000571190.1

CIITA-206, Transcript of class II major histocompatibility complex transactivator, humanhuman

Gene CIITA, Length 479 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-206ENST00000571190 A0A087X002 238 aa10.37□□□□□ -0.75
CIITA-206ENST00000571190 F8VRH5 84 aa10.36□□□□□ -0.75
CIITA-206ENST00000571190 K7EMI3 77 aa10.36□□□□□ -0.75
CIITA-206ENST00000571190 HERVK_113P63121 156 aa10.36□□□□□ -0.75
CIITA-206ENST00000571190 IFITM2Q01629 132 aa10.36□□□□□ -0.75
CIITA-206ENST00000571190 LBHQ53QV2 105 aaPredicted RBP10.36□□□□□ -0.75
CIITA-206ENST00000571190 TP73-AS1Q9UF72 201 aa10.36□□□□□ -0.75
CIITA-206ENST00000571190 TSPAN13O95857 204 aa10.35□□□□□ -0.75
CIITA-206ENST00000571190 MRPL55Q7Z7F7 128 aaKnown RBP10.35□□□□□ -0.75
CIITA-206ENST00000571190 ANAPC16Q96DE5 110 aa10.35□□□□□ -0.75
CIITA-206ENST00000571190 NXT2Q9NPJ8 142 aaKnown RBP10.35□□□□□ -0.75
CIITA-206ENST00000571190 BCE1O60756 84 aa10.34□□□□□ -0.75
CIITA-206ENST00000571190 MT-ND4LP03901 98 aa10.34□□□□□ -0.75
CIITA-206ENST00000571190 PNRC1Q12796 327 aaPredicted RBP10.34□□□□□ -0.75
CIITA-206ENST00000571190 TIMM17AQ99595 171 aa10.34□□□□□ -0.75
CIITA-206ENST00000571190 SEC11AP67812 179 aa10.33□□□□□ -0.76
CIITA-206ENST00000571190 TOMM6Q96B49 74 aa10.33□□□□□ -0.76
CIITA-206ENST00000571190 SMIM1B2RUZ4 78 aa10.32□□□□□ -0.76
CIITA-206ENST00000571190 PAPPA-AS1Q5QFB9 102 aa10.32□□□□□ -0.76
CIITA-206ENST00000571190 LINC00167Q96N53 147 aa10.32□□□□□ -0.76
CIITA-206ENST00000571190 GEMIN7Q9H840 131 aaKnown RBP10.32□□□□□ -0.76
CIITA-206ENST00000571190 RPL37AP8A6NKH3 93 aa10.31□□□□□ -0.76
CIITA-206ENST00000571190 RPL28P46779 137 aaKnown RBP10.31□□□□□ -0.76
CIITA-206ENST00000571190 ADCYAP1P18509 176 aa10.3□□□□□ -0.76
CIITA-206ENST00000571190 CXCL5P42830 114 aa10.3□□□□□ -0.76
CIITA-206ENST00000571190 ANAPC11Q9NYG5 84 aa10.3□□□□□ -0.76
CIITA-206ENST00000571190 KIAA1644Q3SXP7 199 aa10.29□□□□□ -0.76
CIITA-206ENST00000571190 ERASQ7Z444 233 aa10.29□□□□□ -0.76
CIITA-206ENST00000571190 KRTAP13-1Q8IUC0 172 aa10.29□□□□□ -0.76
CIITA-206ENST00000571190 IGLV5-45A0A087WSX0 123 aa10.28□□□□□ -0.76
CIITA-206ENST00000571190 CRYGAP11844 174 aa10.28□□□□□ -0.76
CIITA-206ENST00000571190 KRTAP13-2Q52LG2 175 aa10.28□□□□□ -0.76
CIITA-206ENST00000571190 PDZD11Q5EBL8 140 aa10.28□□□□□ -0.76
CIITA-206ENST00000571190 TYMSOSQ8TAI1 123 aa10.28□□□□□ -0.76
CIITA-206ENST00000571190 IGLV5-37A0A075B6J1 123 aa10.27□□□□□ -0.77
CIITA-206ENST00000571190 TINCRA0A1B0GVN0 87 aa10.27□□□□□ -0.77
CIITA-206ENST00000571190 GAGE10A6NGK3 116 aa10.27□□□□□ -0.77
CIITA-206ENST00000571190 G0S2P27469 103 aa10.27□□□□□ -0.77
CIITA-206ENST00000571190 COX7B2Q8TF08 81 aa10.27□□□□□ -0.77
CIITA-206ENST00000571190 SCGB3A1Q96QR1 104 aa10.27□□□□□ -0.77
CIITA-206ENST00000571190 CST9LQ9H4G1 147 aa10.25□□□□□ -0.77
CIITA-206ENST00000571190 LINC01546A6NGU7 62 aa10.24□□□□□ -0.77
CIITA-206ENST00000571190 RAB5BP61020 215 aa10.24□□□□□ -0.77
CIITA-206ENST00000571190 SCO1O75880 301 aa10.23□□□□□ -0.77
CIITA-206ENST00000571190 SPINK8P0C7L1 97 aa10.23□□□□□ -0.77
CIITA-206ENST00000571190 RAB14P61106 215 aa10.22□□□□□ -0.77
CIITA-206ENST00000571190 CLLU1Q5K131 121 aa10.21□□□□□ -0.77
CIITA-206ENST00000571190 LCE2AQ5TA79 106 aaPredicted RBP10.2□□□□□ -0.78
CIITA-206ENST00000571190 RETNLBQ9BQ08 111 aa10.2□□□□□ -0.78
CIITA-206ENST00000571190 A0A0U1RQV1 116 aa10.19□□□□□ -0.78
CIITA-206ENST00000571190 UBE2AP49459 152 aa10.19□□□□□ -0.78
CIITA-206ENST00000571190 NKAPP1Q8N9T2 125 aa10.19□□□□□ -0.78
CIITA-206ENST00000571190 IGKV2-28A0A075B6P5 120 aa10.18□□□□□ -0.78
CIITA-206ENST00000571190 TRAV9-1A0A075B6T8 112 aa10.18□□□□□ -0.78
CIITA-206ENST00000571190 IGKV2D-28P01615 120 aa10.18□□□□□ -0.78
CIITA-206ENST00000571190 PMVKQ15126 192 aa10.18□□□□□ -0.78
CIITA-206ENST00000571190 FAM229BQ4G0N7 80 aa10.18□□□□□ -0.78
CIITA-206ENST00000571190 LINC01549A6NIU2 74 aa10.17□□□□□ -0.78
CIITA-206ENST00000571190 KRTAP9-2Q9BYQ4 174 aa10.17□□□□□ -0.78
CIITA-206ENST00000571190 MRPL18Q9H0U6 180 aaKnown RBP10.17□□□□□ -0.78
CIITA-206ENST00000571190 IGLV5-39A0A0G2JS06 123 aa10.16□□□□□ -0.78
CIITA-206ENST00000571190 VPREB1P12018 145 aa10.16□□□□□ -0.78
CIITA-206ENST00000571190 LINC00304Q8N9R0 145 aa10.16□□□□□ -0.78
CIITA-206ENST00000571190 GNB1LQ9BYB4 327 aa10.16□□□□□ -0.78
CIITA-206ENST00000571190 FAT4Q6V0I7 4981 aa10.16□□□□□ -0.78
CIITA-206ENST00000571190 ATP5LO75964 103 aa10.15□□□□□ -0.78
CIITA-206ENST00000571190 PFN2P35080 140 aa10.15□□□□□ -0.78
CIITA-206ENST00000571190 PRLHP81277 87 aa10.15□□□□□ -0.78
CIITA-206ENST00000571190 Q8NDZ9 215 aa10.15□□□□□ -0.78
CIITA-206ENST00000571190 TMEM238C9JI98 176 aa10.14□□□□□ -0.79
CIITA-206ENST00000571190 IGLC3P0DOY3 106 aa10.14□□□□□ -0.79
CIITA-206ENST00000571190 SND1-IT1Q9HBX3 110 aa10.14□□□□□ -0.79
CIITA-206ENST00000571190 MUC17Q685J3 4493 aa10.13□□□□□ -0.79
CIITA-206ENST00000571190 A0A096LNJ9 63 aa10.13□□□□□ -0.79
CIITA-206ENST00000571190 TMEM218A2RU14 115 aa10.13□□□□□ -0.79
CIITA-206ENST00000571190 H3BRM9 83 aa10.13□□□□□ -0.79
CIITA-206ENST00000571190 COMMD7Q86VX2 200 aa10.13□□□□□ -0.79
CIITA-206ENST00000571190 TMEM126AQ9H061 195 aa10.13□□□□□ -0.79
CIITA-206ENST00000571190 M0R378 163 aa10.12□□□□□ -0.79
CIITA-206ENST00000571190 ZNF22P17026 224 aaPredicted RBP10.12□□□□□ -0.79
CIITA-206ENST00000571190 FA2HQ7L5A8 372 aa10.12□□□□□ -0.79
CIITA-206ENST00000571190 IGKV2D-26A0A0A0MRZ7 120 aa10.11□□□□□ -0.79
CIITA-206ENST00000571190 TPRXLQ17RH7 258 aa10.11□□□□□ -0.79
CIITA-206ENST00000571190 FAM19A1Q7Z5A9 133 aa10.11□□□□□ -0.79
CIITA-206ENST00000571190 ERG28Q9UKR5 140 aa10.11□□□□□ -0.79
CIITA-206ENST00000571190 PLEKHB2Q96CS7 222 aa10.1□□□□□ -0.79
CIITA-206ENST00000571190 URB1-AS1Q96HZ7 61 aa10.1□□□□□ -0.79
CIITA-206ENST00000571190 IGLV7-46A0A075B6I9 117 aa10.09□□□□□ -0.79
CIITA-206ENST00000571190 UQCC3Q6UW78 93 aa10.09□□□□□ -0.79
CIITA-206ENST00000571190 SLC7A5P1Q8MH63 180 aa10.09□□□□□ -0.79
CIITA-206ENST00000571190 C3orf22Q8N5N4 141 aa10.09□□□□□ -0.79
CIITA-206ENST00000571190 S100PP25815 95 aa10.08□□□□□ -0.8
CIITA-206ENST00000571190 FABP9Q0Z7S8 132 aa10.08□□□□□ -0.8
CIITA-206ENST00000571190 ZNF625Q96I27 306 aaPredicted RBP10.08□□□□□ -0.8
CIITA-206ENST00000571190 SMCO4Q9NRQ5 59 aa10.08□□□□□ -0.8
CIITA-206ENST00000571190 CTAG1AP78358 180 aa10.07□□□□□ -0.8
CIITA-206ENST00000571190 COX17Q14061 63 aa10.07□□□□□ -0.8
CIITA-206ENST00000571190 SEC11CQ9BY50 192 aa10.07□□□□□ -0.8
CIITA-206ENST00000571190 CDIP1Q9H305 208 aa10.07□□□□□ -0.8
CIITA-206ENST00000571190 NDUFA6P56556 154 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms