RNA–Protein interactions for RNA: ENST00000571186.5

CIITA-205, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5

Gene CIITA, Length 1,041 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-205ENST00000571186 PTTG1IPP53801 180 aa8.81□□□□□ -1
CIITA-205ENST00000571186 CST9LQ9H4G1 147 aa8.81□□□□□ -1
CIITA-205ENST00000571186 C6orf48Q9UBA6 75 aa8.81□□□□□ -1
CIITA-205ENST00000571186 NDUFA1O15239 70 aa8.8□□□□□ -1
CIITA-205ENST00000571186 HERVK_113P63121 156 aa8.8□□□□□ -1
CIITA-205ENST00000571186 RPL18AQ02543 176 aaKnown RBP8.8□□□□□ -1
CIITA-205ENST00000571186 LINC01561Q8N1V8 128 aa8.8□□□□□ -1
CIITA-205ENST00000571186 GEMIN7Q9H840 131 aaKnown RBP8.8□□□□□ -1
CIITA-205ENST00000571186 MRPL35Q9NZE8 188 aaKnown RBP8.8□□□□□ -1
CIITA-205ENST00000571186 TOMM7Q9P0U1 55 aa8.8□□□□□ -1
CIITA-205ENST00000571186 LINC01549A6NIU2 74 aa8.79□□□□□ -1
CIITA-205ENST00000571186 PMVKQ15126 192 aa8.79□□□□□ -1
CIITA-205ENST00000571186 RNF151Q2KHN1 245 aa8.79□□□□□ -1
CIITA-205ENST00000571186 TINCRA0A1B0GVN0 87 aa8.78□□□□□ -1
CIITA-205ENST00000571186 A0A1W2PNN7 141 aa8.78□□□□□ -1
CIITA-205ENST00000571186 HBDP02042 147 aa8.78□□□□□ -1
CIITA-205ENST00000571186 TRGC2P03986 189 aa8.78□□□□□ -1
CIITA-205ENST00000571186 NDUFA6P56556 154 aa8.78□□□□□ -1
CIITA-205ENST00000571186 RAB5BP61020 215 aa8.78□□□□□ -1
CIITA-205ENST00000571186 SEC11AP67812 179 aa8.78□□□□□ -1
CIITA-205ENST00000571186 PDZD11Q5EBL8 140 aa8.78□□□□□ -1
CIITA-205ENST00000571186 LINC00469Q8N7U9 141 aa8.78□□□□□ -1
CIITA-205ENST00000571186 F8WDY8 70 aa8.77□□□□□ -1.01
CIITA-205ENST00000571186 C9orf116Q5BN46 136 aaPredicted RBP8.77□□□□□ -1.01
CIITA-205ENST00000571186 PACRGQ96M98 296 aaPredicted RBP8.77□□□□□ -1.01
CIITA-205ENST00000571186 COLCA2A8K830 154 aa8.76□□□□□ -1.01
CIITA-205ENST00000571186 SCO1O75880 301 aa8.76□□□□□ -1.01
CIITA-205ENST00000571186 PRSS2P07478 247 aa8.76□□□□□ -1.01
CIITA-205ENST00000571186 PSORS1C2Q9UIG4 136 aa8.76□□□□□ -1.01
CIITA-205ENST00000571186 SMIM1B2RUZ4 78 aa8.75□□□□□ -1.01
CIITA-205ENST00000571186 SPINK8P0C7L1 97 aa8.75□□□□□ -1.01
CIITA-205ENST00000571186 C6orf226Q5I0X4 101 aa8.75□□□□□ -1.01
CIITA-205ENST00000571186 Q8IZM0 81 aa8.75□□□□□ -1.01
CIITA-205ENST00000571186 IGLV5-45A0A087WSX0 123 aa8.74□□□□□ -1.01
CIITA-205ENST00000571186 FAM168BA1KXE4 195 aa8.74□□□□□ -1.01
CIITA-205ENST00000571186 GAGE2EQ4V326 116 aa8.74□□□□□ -1.01
CIITA-205ENST00000571186 C1orf137Q5JT78 98 aa8.74□□□□□ -1.01
CIITA-205ENST00000571186 CHCHD1Q96BP2 118 aaKnown RBP8.74□□□□□ -1.01
CIITA-205ENST00000571186 GAGE2DQ9UEU5 116 aa8.74□□□□□ -1.01
CIITA-205ENST00000571186 TRBV30A0A0K0K1B3 111 aa8.73□□□□□ -1.01
CIITA-205ENST00000571186 TLX1NBP0CAT3 122 aa8.73□□□□□ -1.01
CIITA-205ENST00000571186 IGLC3P0DOY3 106 aa8.73□□□□□ -1.01
CIITA-205ENST00000571186 CKS1BP61024 79 aa8.73□□□□□ -1.01
CIITA-205ENST00000571186 BAGE3Q86Y29 109 aa8.73□□□□□ -1.01
CIITA-205ENST00000571186 FAM19A2Q8N3H0 131 aa8.73□□□□□ -1.01
CIITA-205ENST00000571186 ATP5LO75964 103 aa8.72□□□□□ -1.01
CIITA-205ENST00000571186 LINC00310P59036 64 aa8.72□□□□□ -1.01
CIITA-205ENST00000571186 PHF5AQ7RTV0 110 aaKnown RBP8.72□□□□□ -1.01
CIITA-205ENST00000571186 PRR26Q8N8Z3 221 aa8.72□□□□□ -1.01
CIITA-205ENST00000571186 ZNF22P17026 224 aaPredicted RBP8.71□□□□□ -1.02
CIITA-205ENST00000571186 COX7B2Q8TF08 81 aa8.71□□□□□ -1.02
CIITA-205ENST00000571186 NDUFC2-KCTD14E9PQ53 114 aa8.7□□□□□ -1.02
CIITA-205ENST00000571186 NUPR1O60356 82 aa8.7□□□□□ -1.02
CIITA-205ENST00000571186 KRTAP7-1Q8IUC3 87 aa8.7□□□□□ -1.02
CIITA-205ENST00000571186 DIRC1Q969H9 104 aa8.7□□□□□ -1.02
CIITA-205ENST00000571186 C11orf86A6NJI1 115 aa8.69□□□□□ -1.02
CIITA-205ENST00000571186 F8VRH5 84 aa8.69□□□□□ -1.02
CIITA-205ENST00000571186 HSBP1O75506 76 aa8.69□□□□□ -1.02
CIITA-205ENST00000571186 SERF1AO75920 110 aa8.69□□□□□ -1.02
CIITA-205ENST00000571186 C9orf129Q5T035 196 aaKnown RBP8.69□□□□□ -1.02
CIITA-205ENST00000571186 FAM19A5Q7Z5A7 132 aaPredicted RBP8.69□□□□□ -1.02
CIITA-205ENST00000571186 IFI27L1Q96BM0 104 aa8.69□□□□□ -1.02
CIITA-205ENST00000571186 H3BRM9 83 aa8.68□□□□□ -1.02
CIITA-205ENST00000571186 CHTOPQ9Y3Y2 248 aaKnown RBP8.68□□□□□ -1.02
CIITA-205ENST00000571186 IGLV7-43P04211 117 aa8.67□□□□□ -1.02
CIITA-205ENST00000571186 IGLV5-39A0A0G2JS06 123 aa8.66□□□□□ -1.02
CIITA-205ENST00000571186 CXCL5P42830 114 aa8.66□□□□□ -1.02
CIITA-205ENST00000571186 TMEM170BQ5T4T1 132 aa8.66□□□□□ -1.02
CIITA-205ENST00000571186 KRTAP11-1Q8IUC1 163 aa8.66□□□□□ -1.02
CIITA-205ENST00000571186 XAGE1AQ9HD64 81 aa8.66□□□□□ -1.02
CIITA-205ENST00000571186 TRAV12-1A0A0B4J245 112 aa8.65□□□□□ -1.02
CIITA-205ENST00000571186 H0Y8G0 127 aa8.65□□□□□ -1.02
CIITA-205ENST00000571186 PRR4Q16378 134 aa8.65□□□□□ -1.02
CIITA-205ENST00000571186 H0Y9J4 135 aa8.64□□□□□ -1.03
CIITA-205ENST00000571186 FABP4P15090 132 aa8.63□□□□□ -1.03
CIITA-205ENST00000571186 IGLV1-50A0A075B6I6 118 aa8.62□□□□□ -1.03
CIITA-205ENST00000571186 M0QXV9 152 aa8.62□□□□□ -1.03
CIITA-205ENST00000571186 LEPROTL1O95214 131 aa8.62□□□□□ -1.03
CIITA-205ENST00000571186 MUC2Q02817 5179 aa8.61□□□□□ -1.03
CIITA-205ENST00000571186 TMEM223A0PJW6 202 aa8.61□□□□□ -1.03
CIITA-205ENST00000571186 HIST1H2BKO60814 126 aa8.61□□□□□ -1.03
CIITA-205ENST00000571186 HIST1H2BJP06899 126 aa8.61□□□□□ -1.03
CIITA-205ENST00000571186 HIST1H2BOP23527 126 aa8.61□□□□□ -1.03
CIITA-205ENST00000571186 HIST1H2BBP33778 126 aa8.61□□□□□ -1.03
CIITA-205ENST00000571186 HIST1H2BDP58876 126 aa8.61□□□□□ -1.03
CIITA-205ENST00000571186 HIST1H2BCP62807 126 aa8.61□□□□□ -1.03
CIITA-205ENST00000571186 HIST2H2BEQ16778 126 aa8.61□□□□□ -1.03
CIITA-205ENST00000571186 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.61□□□□□ -1.03
CIITA-205ENST00000571186 HIST1H2BHQ93079 126 aa8.61□□□□□ -1.03
CIITA-205ENST00000571186 ZNF625Q96I27 306 aaPredicted RBP8.61□□□□□ -1.03
CIITA-205ENST00000571186 HIST1H2BNQ99877 126 aa8.61□□□□□ -1.03
CIITA-205ENST00000571186 HIST1H2BMQ99879 126 aa8.61□□□□□ -1.03
CIITA-205ENST00000571186 PFN2P35080 140 aa8.6□□□□□ -1.03
CIITA-205ENST00000571186 A0A0U1RQV1 116 aa8.59□□□□□ -1.03
CIITA-205ENST00000571186 PMCHL2Q9BQD1 86 aa8.59□□□□□ -1.03
CIITA-205ENST00000571186 C22orf24Q9Y442 160 aa8.59□□□□□ -1.03
CIITA-205ENST00000571186 KRTAP1-4P0C5Y4 121 aa8.58□□□□□ -1.04
CIITA-205ENST00000571186 UBE2BP63146 152 aa8.58□□□□□ -1.04
CIITA-205ENST00000571186 KRTAP9-2Q9BYQ4 174 aa8.58□□□□□ -1.04
CIITA-205ENST00000571186 HSPB8Q9UJY1 196 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms