RNA–Protein interactions for RNA: ENST00000570904.5

LITAF-205, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 1,118 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-205ENST00000570904 PAPPA-AS1Q5QFB9 102 aa12.5□□□□□ -0.41
LITAF-205ENST00000570904 LPAP08519 4548 aa12.49□□□□□ -0.41
LITAF-205ENST00000570904 GEMIN7Q9H840 131 aaKnown RBP12.49□□□□□ -0.41
LITAF-205ENST00000570904 TMEM218A2RU14 115 aa12.48□□□□□ -0.41
LITAF-205ENST00000570904 G0S2P27469 103 aa12.48□□□□□ -0.41
LITAF-205ENST00000570904 SEC11AP67812 179 aa12.48□□□□□ -0.41
LITAF-205ENST00000570904 XAGE1AQ9HD64 81 aa12.48□□□□□ -0.41
LITAF-205ENST00000570904 SCGB3A1Q96QR1 104 aa12.47□□□□□ -0.41
LITAF-205ENST00000570904 KRTAP1-4P0C5Y4 121 aa12.46□□□□□ -0.41
LITAF-205ENST00000570904 UQCC3Q6UW78 93 aa12.46□□□□□ -0.41
LITAF-205ENST00000570904 ERASQ7Z444 233 aa12.46□□□□□ -0.41
LITAF-205ENST00000570904 TRAV9-1A0A075B6T8 112 aa12.45□□□□□ -0.42
LITAF-205ENST00000570904 F8VRH5 84 aa12.45□□□□□ -0.42
LITAF-205ENST00000570904 C22orf24Q9Y442 160 aa12.45□□□□□ -0.42
LITAF-205ENST00000570904 SMIM1B2RUZ4 78 aa12.43□□□□□ -0.42
LITAF-205ENST00000570904 IFITM2Q01629 132 aa12.43□□□□□ -0.42
LITAF-205ENST00000570904 IGLV1-50A0A075B6I6 118 aa12.42□□□□□ -0.42
LITAF-205ENST00000570904 GNB1LQ9BYB4 327 aa12.42□□□□□ -0.42
LITAF-205ENST00000570904 TINCRA0A1B0GVN0 87 aa12.41□□□□□ -0.42
LITAF-205ENST00000570904 S100PP25815 95 aa12.41□□□□□ -0.42
LITAF-205ENST00000570904 CXCL5P42830 114 aa12.41□□□□□ -0.42
LITAF-205ENST00000570904 LINC01546A6NGU7 62 aa12.4□□□□□ -0.42
LITAF-205ENST00000570904 COX7B2Q8TF08 81 aa12.4□□□□□ -0.42
LITAF-205ENST00000570904 SEC11CQ9BY50 192 aa12.4□□□□□ -0.42
LITAF-205ENST00000570904 LBHQ53QV2 105 aaPredicted RBP12.39□□□□□ -0.43
LITAF-205ENST00000570904 PDZD11Q5EBL8 140 aa12.39□□□□□ -0.43
LITAF-205ENST00000570904 CST9LQ9H4G1 147 aa12.39□□□□□ -0.43
LITAF-205ENST00000570904 IGLV5-45A0A087WSX0 123 aa12.38□□□□□ -0.43
LITAF-205ENST00000570904 ZNF861PO60384 105 aa12.38□□□□□ -0.43
LITAF-205ENST00000570904 SPINK8P0C7L1 97 aa12.38□□□□□ -0.43
LITAF-205ENST00000570904 NUPR1O60356 82 aa12.37□□□□□ -0.43
LITAF-205ENST00000570904 FA2HQ7L5A8 372 aa12.37□□□□□ -0.43
LITAF-205ENST00000570904 MRPL55Q7Z7F7 128 aaKnown RBP12.37□□□□□ -0.43
LITAF-205ENST00000570904 LINC01549A6NIU2 74 aa12.36□□□□□ -0.43
LITAF-205ENST00000570904 FABP9Q0Z7S8 132 aa12.36□□□□□ -0.43
LITAF-205ENST00000570904 COMMD7Q86VX2 200 aa12.36□□□□□ -0.43
LITAF-205ENST00000570904 MRPL18Q9H0U6 180 aaKnown RBP12.36□□□□□ -0.43
LITAF-205ENST00000570904 TP73-AS1Q9UF72 201 aa12.36□□□□□ -0.43
LITAF-205ENST00000570904 PMVKQ15126 192 aa12.35□□□□□ -0.43
LITAF-205ENST00000570904 SMCO4Q9NRQ5 59 aa12.35□□□□□ -0.43
LITAF-205ENST00000570904 COX19Q49B96 90 aa12.34□□□□□ -0.43
LITAF-205ENST00000570904 RPL13AP40429 203 aaKnown RBP12.33□□□□□ -0.44
LITAF-205ENST00000570904 RAB5BP61020 215 aa12.33□□□□□ -0.44
LITAF-205ENST00000570904 LINC00167Q96N53 147 aa12.32□□□□□ -0.44
LITAF-205ENST00000570904 GAGE10A6NGK3 116 aa12.31□□□□□ -0.44
LITAF-205ENST00000570904 RPL37AP8A6NKH3 93 aa12.31□□□□□ -0.44
LITAF-205ENST00000570904 RPS10P5Q9NQ39 176 aa12.31□□□□□ -0.44
LITAF-205ENST00000570904 CARHSP1Q9Y2V2 147 aaKnown RBP12.31□□□□□ -0.44
LITAF-205ENST00000570904 BCE1O60756 84 aa12.3□□□□□ -0.44
LITAF-205ENST00000570904 H3BRM9 83 aa12.29□□□□□ -0.44
LITAF-205ENST00000570904 RHEBQ15382 184 aa12.29□□□□□ -0.44
LITAF-205ENST00000570904 C10orf91Q5T1B1 145 aa12.29□□□□□ -0.44
LITAF-205ENST00000570904 A0A096LNJ9 63 aa12.28□□□□□ -0.44
LITAF-205ENST00000570904 RPL28P46779 137 aaKnown RBP12.28□□□□□ -0.44
LITAF-205ENST00000570904 IGLC3P0DOY3 106 aa12.27□□□□□ -0.45
LITAF-205ENST00000570904 NDUFA6P56556 154 aa12.27□□□□□ -0.45
LITAF-205ENST00000570904 URB1-AS1Q96HZ7 61 aa12.27□□□□□ -0.45
LITAF-205ENST00000570904 IGLV5-37A0A075B6J1 123 aa12.26□□□□□ -0.45
LITAF-205ENST00000570904 ATP5LO75964 103 aa12.26□□□□□ -0.45
LITAF-205ENST00000570904 NKAPP1Q8N9T2 125 aa12.26□□□□□ -0.45
LITAF-205ENST00000570904 IGLV5-39A0A0G2JS06 123 aa12.25□□□□□ -0.45
LITAF-205ENST00000570904 SCO1O75880 301 aa12.25□□□□□ -0.45
LITAF-205ENST00000570904 C18orf32Q8TCD1 76 aa12.25□□□□□ -0.45
LITAF-205ENST00000570904 A0A087X002 238 aa12.24□□□□□ -0.45
LITAF-205ENST00000570904 ZNF22P17026 224 aaPredicted RBP12.24□□□□□ -0.45
LITAF-205ENST00000570904 PFN2P35080 140 aa12.24□□□□□ -0.45
LITAF-205ENST00000570904 PMCHL1Q16048 86 aa12.24□□□□□ -0.45
LITAF-205ENST00000570904 PRR4Q16378 134 aa12.24□□□□□ -0.45
LITAF-205ENST00000570904 TRAPPC1Q9Y5R8 145 aa12.24□□□□□ -0.45
LITAF-205ENST00000570904 HBDP02042 147 aa12.22□□□□□ -0.45
LITAF-205ENST00000570904 LINC00614P0C842 121 aa12.22□□□□□ -0.45
LITAF-205ENST00000570904 IGKV2-28A0A075B6P5 120 aa12.21□□□□□ -0.45
LITAF-205ENST00000570904 IGKV2D-28P01615 120 aa12.21□□□□□ -0.45
LITAF-205ENST00000570904 TSPAN13O95857 204 aa12.2□□□□□ -0.46
LITAF-205ENST00000570904 UBE2AP49459 152 aa12.2□□□□□ -0.46
LITAF-205ENST00000570904 KRTAP13-1Q8IUC0 172 aa12.2□□□□□ -0.46
LITAF-205ENST00000570904 ANAPC11Q9NYG5 84 aa12.2□□□□□ -0.46
LITAF-205ENST00000570904 CRYGAP11844 174 aa12.19□□□□□ -0.46
LITAF-205ENST00000570904 ERG28Q9UKR5 140 aa12.19□□□□□ -0.46
LITAF-205ENST00000570904 C11orf86A6NJI1 115 aa12.18□□□□□ -0.46
LITAF-205ENST00000570904 ZNF625Q96I27 306 aaPredicted RBP12.18□□□□□ -0.46
LITAF-205ENST00000570904 SND1-IT1Q9HBX3 110 aa12.18□□□□□ -0.46
LITAF-205ENST00000570904 BAGE3Q86Y29 109 aa12.17□□□□□ -0.46
LITAF-205ENST00000570904 TYMSOSQ8TAI1 123 aa12.17□□□□□ -0.46
LITAF-205ENST00000570904 APOC3P02656 99 aa12.16□□□□□ -0.46
LITAF-205ENST00000570904 VPREB1P12018 145 aa12.16□□□□□ -0.46
LITAF-205ENST00000570904 TMEM170BQ5T4T1 132 aa12.15□□□□□ -0.46
LITAF-205ENST00000570904 KRTAP13-2Q52LG2 175 aa12.14□□□□□ -0.47
LITAF-205ENST00000570904 Q8NDZ9 215 aa12.14□□□□□ -0.47
LITAF-205ENST00000570904 TMEM238C9JI98 176 aa12.13□□□□□ -0.47
LITAF-205ENST00000570904 PRLHP81277 87 aa12.13□□□□□ -0.47
LITAF-205ENST00000570904 MUC2Q02817 5179 aa12.13□□□□□ -0.47
LITAF-205ENST00000570904 COX17Q14061 63 aa12.12□□□□□ -0.47
LITAF-205ENST00000570904 RPL24P83731 157 aaKnown RBP12.11□□□□□ -0.47
LITAF-205ENST00000570904 FAM19A1Q7Z5A9 133 aa12.11□□□□□ -0.47
LITAF-205ENST00000570904 TMEM126AQ9H061 195 aa12.11□□□□□ -0.47
LITAF-205ENST00000570904 CHTOPQ9Y3Y2 248 aaKnown RBP12.11□□□□□ -0.47
LITAF-205ENST00000570904 SNAPINO95295 136 aa12.1□□□□□ -0.47
LITAF-205ENST00000570904 SVBPQ8N300 66 aa12.09□□□□□ -0.47
LITAF-205ENST00000570904 M0R378 163 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 120 ms