RNA–Protein interactions for RNA: ENST00000570902.1

SCARF1-204, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 1,060 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-204ENST00000570902 M0QXV9 152 aa11.37□□□□□ -0.59
SCARF1-204ENST00000570902 LINC00242Q5T6M2 205 aa11.37□□□□□ -0.59
SCARF1-204ENST00000570902 UNQ6190/PRO20217Q6UXQ8 127 aa11.37□□□□□ -0.59
SCARF1-204ENST00000570902 C2orf88Q9BSF0 95 aa11.37□□□□□ -0.59
SCARF1-204ENST00000570902 VCX2Q9H322 139 aa11.37□□□□□ -0.59
SCARF1-204ENST00000570902 C6orf48Q9UBA6 75 aa11.37□□□□□ -0.59
SCARF1-204ENST00000570902 G0S2P27469 103 aa11.36□□□□□ -0.59
SCARF1-204ENST00000570902 TRAPPC1Q9Y5R8 145 aa11.35□□□□□ -0.59
SCARF1-204ENST00000570902 LINC00173Q6ZV60 143 aa11.34□□□□□ -0.59
SCARF1-204ENST00000570902 SLC7A5P1Q8MH63 180 aa11.34□□□□□ -0.59
SCARF1-204ENST00000570902 TOMM6Q96B49 74 aa11.34□□□□□ -0.59
SCARF1-204ENST00000570902 AMELXQ99217 191 aa11.34□□□□□ -0.59
SCARF1-204ENST00000570902 LINC01546A6NGU7 62 aa11.33□□□□□ -0.6
SCARF1-204ENST00000570902 NPSP0C0P6 89 aa11.33□□□□□ -0.6
SCARF1-204ENST00000570902 KRTAP7-1Q8IUC3 87 aa11.33□□□□□ -0.6
SCARF1-204ENST00000570902 FA2HQ7L5A8 372 aa11.32□□□□□ -0.6
SCARF1-204ENST00000570902 TRBV30A0A0K0K1B3 111 aa11.31□□□□□ -0.6
SCARF1-204ENST00000570902 YPEL4Q96NS1 127 aa11.31□□□□□ -0.6
SCARF1-204ENST00000570902 SCGB3A1Q96QR1 104 aa11.31□□□□□ -0.6
SCARF1-204ENST00000570902 TIMM17AQ99595 171 aa11.31□□□□□ -0.6
SCARF1-204ENST00000570902 SMCO4Q9NRQ5 59 aa11.31□□□□□ -0.6
SCARF1-204ENST00000570902 NDUFC2-KCTD14E9PQ53 114 aa11.3□□□□□ -0.6
SCARF1-204ENST00000570902 PAPPA-AS1Q5QFB9 102 aa11.3□□□□□ -0.6
SCARF1-204ENST00000570902 ERASQ7Z444 233 aa11.3□□□□□ -0.6
SCARF1-204ENST00000570902 ZNF861PO60384 105 aa11.29□□□□□ -0.6
SCARF1-204ENST00000570902 KIAA0087Q14695 138 aa11.29□□□□□ -0.6
SCARF1-204ENST00000570902 C18orf32Q8TCD1 76 aa11.29□□□□□ -0.6
SCARF1-204ENST00000570902 PACRGQ96M98 296 aaPredicted RBP11.28□□□□□ -0.6
SCARF1-204ENST00000570902 C9orf129Q5T035 196 aaKnown RBP11.27□□□□□ -0.61
SCARF1-204ENST00000570902 CBLN2Q8IUK8 224 aa11.27□□□□□ -0.61
SCARF1-204ENST00000570902 URB1-AS1Q96HZ7 61 aa11.27□□□□□ -0.61
SCARF1-204ENST00000570902 NUPR1O60356 82 aa11.26□□□□□ -0.61
SCARF1-204ENST00000570902 TSPAN13O95857 204 aa11.26□□□□□ -0.61
SCARF1-204ENST00000570902 FAM19A3Q7Z5A8 133 aa11.26□□□□□ -0.61
SCARF1-204ENST00000570902 LINC01561Q8N1V8 128 aa11.26□□□□□ -0.61
SCARF1-204ENST00000570902 GEMIN7Q9H840 131 aaKnown RBP11.26□□□□□ -0.61
SCARF1-204ENST00000570902 LINC01549A6NIU2 74 aa11.25□□□□□ -0.61
SCARF1-204ENST00000570902 LINC00614P0C842 121 aa11.25□□□□□ -0.61
SCARF1-204ENST00000570902 HERVK_113P63121 156 aa11.25□□□□□ -0.61
SCARF1-204ENST00000570902 SEC11AP67812 179 aa11.25□□□□□ -0.61
SCARF1-204ENST00000570902 C2orf82Q6UX34 121 aa11.25□□□□□ -0.61
SCARF1-204ENST00000570902 TOMM7Q9P0U1 55 aa11.25□□□□□ -0.61
SCARF1-204ENST00000570902 PRSS2P07478 247 aa11.24□□□□□ -0.61
SCARF1-204ENST00000570902 CDKN2A-AS1Q9UH64 79 aa11.24□□□□□ -0.61
SCARF1-204ENST00000570902 LCE2AQ5TA79 106 aaPredicted RBP11.23□□□□□ -0.61
SCARF1-204ENST00000570902 FAT4Q6V0I7 4981 aa11.22□□□□□ -0.61
SCARF1-204ENST00000570902 A0A096LNJ9 63 aa11.22□□□□□ -0.61
SCARF1-204ENST00000570902 LBHQ53QV2 105 aaPredicted RBP11.22□□□□□ -0.61
SCARF1-204ENST00000570902 CST9LQ9H4G1 147 aa11.22□□□□□ -0.61
SCARF1-204ENST00000570902 PMCHL1Q16048 86 aa11.21□□□□□ -0.61
SCARF1-204ENST00000570902 C6orf226Q5I0X4 101 aa11.21□□□□□ -0.61
SCARF1-204ENST00000570902 LINC00469Q8N7U9 141 aa11.21□□□□□ -0.61
SCARF1-204ENST00000570902 C22orf24Q9Y442 160 aa11.21□□□□□ -0.61
SCARF1-204ENST00000570902 RAB5BP61020 215 aa11.2□□□□□ -0.62
SCARF1-204ENST00000570902 CKS1BP61024 79 aa11.2□□□□□ -0.62
SCARF1-204ENST00000570902 PMVKQ15126 192 aa11.2□□□□□ -0.62
SCARF1-204ENST00000570902 HBDP02042 147 aa11.19□□□□□ -0.62
SCARF1-204ENST00000570902 CRYGAP11844 174 aa11.19□□□□□ -0.62
SCARF1-204ENST00000570902 RPL28P46779 137 aaKnown RBP11.19□□□□□ -0.62
SCARF1-204ENST00000570902 Q8IZM0 81 aa11.19□□□□□ -0.62
SCARF1-204ENST00000570902 TYMSOSQ8TAI1 123 aa11.19□□□□□ -0.62
SCARF1-204ENST00000570902 A0A087X002 238 aa11.18□□□□□ -0.62
SCARF1-204ENST00000570902 TINCRA0A1B0GVN0 87 aa11.18□□□□□ -0.62
SCARF1-204ENST00000570902 KRTAP9-6A0A140TA67 174 aa11.17□□□□□ -0.62
SCARF1-204ENST00000570902 NDUFA6P56556 154 aa11.17□□□□□ -0.62
SCARF1-204ENST00000570902 PDZD11Q5EBL8 140 aa11.16□□□□□ -0.62
SCARF1-204ENST00000570902 IGLV5-45A0A087WSX0 123 aa11.15□□□□□ -0.62
SCARF1-204ENST00000570902 SMIM1B2RUZ4 78 aa11.15□□□□□ -0.62
SCARF1-204ENST00000570902 BCE1O60756 84 aa11.15□□□□□ -0.62
SCARF1-204ENST00000570902 TRGC2P03986 189 aa11.15□□□□□ -0.62
SCARF1-204ENST00000570902 TP73-AS1Q9UF72 201 aa11.15□□□□□ -0.62
SCARF1-204ENST00000570902 SPINK8P0C7L1 97 aa11.14□□□□□ -0.63
SCARF1-204ENST00000570902 MRPL55Q7Z7F7 128 aaKnown RBP11.14□□□□□ -0.63
SCARF1-204ENST00000570902 CHCHD1Q96BP2 118 aaKnown RBP11.14□□□□□ -0.63
SCARF1-204ENST00000570902 XAGE1AQ9HD64 81 aa11.14□□□□□ -0.63
SCARF1-204ENST00000570902 ATP5LO75964 103 aa11.13□□□□□ -0.63
SCARF1-204ENST00000570902 COX7B2Q8TF08 81 aa11.13□□□□□ -0.63
SCARF1-204ENST00000570902 COLCA2A8K830 154 aa11.12□□□□□ -0.63
SCARF1-204ENST00000570902 F8VRH5 84 aa11.12□□□□□ -0.63
SCARF1-204ENST00000570902 BAGE3Q86Y29 109 aa11.12□□□□□ -0.63
SCARF1-204ENST00000570902 IGLC3P0DOY3 106 aa11.11□□□□□ -0.63
SCARF1-204ENST00000570902 CXCL5P42830 114 aa11.11□□□□□ -0.63
SCARF1-204ENST00000570902 H3BRM9 83 aa11.1□□□□□ -0.63
SCARF1-204ENST00000570902 CDIP1Q9H305 208 aa11.09□□□□□ -0.63
SCARF1-204ENST00000570902 HSBP1O75506 76 aa11.08□□□□□ -0.64
SCARF1-204ENST00000570902 FAM19A2Q8N3H0 131 aa11.08□□□□□ -0.64
SCARF1-204ENST00000570902 SCO1O75880 301 aa11.07□□□□□ -0.64
SCARF1-204ENST00000570902 TPRXLQ17RH7 258 aa11.07□□□□□ -0.64
SCARF1-204ENST00000570902 RETNLBQ9BQ08 111 aa11.07□□□□□ -0.64
SCARF1-204ENST00000570902 MUC17Q685J3 4493 aa11.06□□□□□ -0.64
SCARF1-204ENST00000570902 ZNF22P17026 224 aaPredicted RBP11.06□□□□□ -0.64
SCARF1-204ENST00000570902 LINC00304Q8N9R0 145 aa11.06□□□□□ -0.64
SCARF1-204ENST00000570902 IFI27L1Q96BM0 104 aa11.06□□□□□ -0.64
SCARF1-204ENST00000570902 LINC00167Q96N53 147 aa11.06□□□□□ -0.64
SCARF1-204ENST00000570902 C11orf86A6NJI1 115 aa11.05□□□□□ -0.64
SCARF1-204ENST00000570902 RPL37AP8A6NKH3 93 aa11.05□□□□□ -0.64
SCARF1-204ENST00000570902 FAM229BQ4G0N7 80 aa11.05□□□□□ -0.64
SCARF1-204ENST00000570902 KRTAP13-2Q52LG2 175 aa11.05□□□□□ -0.64
SCARF1-204ENST00000570902 ANAPC11Q9NYG5 84 aa11.05□□□□□ -0.64
SCARF1-204ENST00000570902 SERF1AO75920 110 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms