RNA–Protein interactions for RNA: ENST00000569715.5

PDXDC1-216, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene PDXDC1, Length 3,775 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-216ENST00000569715 SPANXB1Q9NS25 103 aaPredicted RBP7.36□□□□□ -1.23
PDXDC1-216ENST00000569715 K7ERJ3 54 aa7.36□□□□□ -1.23
PDXDC1-216ENST00000569715 COX7A2LO14548 114 aa7.36□□□□□ -1.23
PDXDC1-216ENST00000569715 DNAH1Q9P2D7 4330 aa7.36□□□□□ -1.23
PDXDC1-216ENST00000569715 A0A1B0GWB2 263 aa7.35□□□□□ -1.23
PDXDC1-216ENST00000569715 DNAH10OSP0CZ25 163 aa7.35□□□□□ -1.23
PDXDC1-216ENST00000569715 CCL18P55774 89 aa7.35□□□□□ -1.23
PDXDC1-216ENST00000569715 DAND5Q8N907 189 aa7.35□□□□□ -1.23
PDXDC1-216ENST00000569715 SIGMAR1Q99720 223 aa7.35□□□□□ -1.23
PDXDC1-216ENST00000569715 TGP01266 2768 aa7.35□□□□□ -1.23
PDXDC1-216ENST00000569715 A0A0U1RRA0 63 aa7.35□□□□□ -1.23
PDXDC1-216ENST00000569715 C9orf118A6NHY6 69 aa7.35□□□□□ -1.23
PDXDC1-216ENST00000569715 APLNQ9ULZ1 77 aa7.34□□□□□ -1.23
PDXDC1-216ENST00000569715 A0A1B0GV72 72 aa7.34□□□□□ -1.24
PDXDC1-216ENST00000569715 NPC2P61916 151 aa7.34□□□□□ -1.24
PDXDC1-216ENST00000569715 ETDBQ3ZM63 59 aa7.34□□□□□ -1.24
PDXDC1-216ENST00000569715 KRTAP26-1Q6PEX3 210 aa7.34□□□□□ -1.24
PDXDC1-216ENST00000569715 EIF4EBP3O60516 100 aaPredicted RBP7.33□□□□□ -1.24
PDXDC1-216ENST00000569715 MALP21145 153 aa7.33□□□□□ -1.24
PDXDC1-216ENST00000569715 MIAQ16674 131 aa7.33□□□□□ -1.24
PDXDC1-216ENST00000569715 C2orf82Q6UX34 121 aa7.33□□□□□ -1.24
PDXDC1-216ENST00000569715 MUSTN1Q8IVN3 82 aa7.33□□□□□ -1.24
PDXDC1-216ENST00000569715 TRAV8-4A0A0B4J246 113 aa7.32□□□□□ -1.24
PDXDC1-216ENST00000569715 KIAA0087Q14695 138 aa7.32□□□□□ -1.24
PDXDC1-216ENST00000569715 LINC01561Q8N1V8 128 aa7.32□□□□□ -1.24
PDXDC1-216ENST00000569715 LINC00526Q96FQ7 95 aa7.32□□□□□ -1.24
PDXDC1-216ENST00000569715 Q9HAA7 133 aa7.32□□□□□ -1.24
PDXDC1-216ENST00000569715 K7EP34 96 aa7.32□□□□□ -1.24
PDXDC1-216ENST00000569715 Q8IZM0 81 aa7.32□□□□□ -1.24
PDXDC1-216ENST00000569715 H7C2G1 150 aa7.32□□□□□ -1.24
PDXDC1-216ENST00000569715 C6orf226Q5I0X4 101 aa7.32□□□□□ -1.24
PDXDC1-216ENST00000569715 MEIG1Q5JSS6 88 aa7.32□□□□□ -1.24
PDXDC1-216ENST00000569715 UPK3BQ9BT76 320 aa7.32□□□□□ -1.24
PDXDC1-216ENST00000569715 APOMO95445 188 aa7.31□□□□□ -1.24
PDXDC1-216ENST00000569715 SPANXDQ9BXN6 97 aa7.31□□□□□ -1.24
PDXDC1-216ENST00000569715 SPANXCQ9NY87 97 aa7.31□□□□□ -1.24
PDXDC1-216ENST00000569715 TIMM17BO60830 172 aa7.31□□□□□ -1.24
PDXDC1-216ENST00000569715 PRSS2P07478 247 aa7.31□□□□□ -1.24
PDXDC1-216ENST00000569715 Q1RN00 199 aa7.31□□□□□ -1.24
PDXDC1-216ENST00000569715 A0A1W2PPM0 123 aa7.31□□□□□ -1.24
PDXDC1-216ENST00000569715 HERV-K104P63124 156 aa7.31□□□□□ -1.24
PDXDC1-216ENST00000569715 C6orf223Q8N319 242 aa7.31□□□□□ -1.24
PDXDC1-216ENST00000569715 IGKV2D-24A0A075B6R9 120 aa7.3□□□□□ -1.24
PDXDC1-216ENST00000569715 A4D1N5 150 aa7.3□□□□□ -1.24
PDXDC1-216ENST00000569715 NUPR2A6NF83 97 aa7.3□□□□□ -1.24
PDXDC1-216ENST00000569715 H3BMG7 143 aa7.3□□□□□ -1.24
PDXDC1-216ENST00000569715 C1orf43Q9BWL3 253 aa7.3□□□□□ -1.24
PDXDC1-216ENST00000569715 PSMB2P49721 201 aa7.29□□□□□ -1.24
PDXDC1-216ENST00000569715 SPAG11BQ08648 103 aa7.29□□□□□ -1.24
PDXDC1-216ENST00000569715 SOSTDC1Q6X4U4 206 aa7.29□□□□□ -1.24
PDXDC1-216ENST00000569715 KRTAP1-5Q9BYS1 174 aa7.29□□□□□ -1.24
PDXDC1-216ENST00000569715 DNAH10Q8IVF4 4471 aa7.29□□□□□ -1.24
PDXDC1-216ENST00000569715 CIRBPQ14011 172 aaKnown RBP7.29□□□□□ -1.24
PDXDC1-216ENST00000569715 KLK5Q9Y337 293 aaPredicted RBP7.29□□□□□ -1.24
PDXDC1-216ENST00000569715 IBA57-AS1B1ANH7 110 aa7.28□□□□□ -1.24
PDXDC1-216ENST00000569715 CFAP161Q6P656 301 aa7.28□□□□□ -1.24
PDXDC1-216ENST00000569715 UBE2DNLQ8IWF7 75 aa7.28□□□□□ -1.24
PDXDC1-216ENST00000569715 TMEM238LA0A1B0GVL6 79 aa7.28□□□□□ -1.24
PDXDC1-216ENST00000569715 A6NJY4 79 aa7.28□□□□□ -1.24
PDXDC1-216ENST00000569715 CFC1BP0CG36 223 aa7.28□□□□□ -1.24
PDXDC1-216ENST00000569715 CFC1P0CG37 223 aa7.28□□□□□ -1.24
PDXDC1-216ENST00000569715 PFN2P35080 140 aa7.28□□□□□ -1.24
PDXDC1-216ENST00000569715 CKS1BP61024 79 aa7.28□□□□□ -1.24
PDXDC1-216ENST00000569715 C10orf25Q5T742 122 aa7.28□□□□□ -1.24
PDXDC1-216ENST00000569715 LINC00308Q8TCZ7 52 aa7.28□□□□□ -1.24
PDXDC1-216ENST00000569715 HIGD2BQ4VC39 106 aa7.27□□□□□ -1.25
PDXDC1-216ENST00000569715 C9orf116Q5BN46 136 aaPredicted RBP7.27□□□□□ -1.25
PDXDC1-216ENST00000569715 CASC10Q5T4H9 136 aa7.27□□□□□ -1.25
PDXDC1-216ENST00000569715 C15orf56Q8N910 161 aa7.27□□□□□ -1.25
PDXDC1-216ENST00000569715 MIR7-3HGQ8N6C7 128 aa7.27□□□□□ -1.25
PDXDC1-216ENST00000569715 ERG28Q9UKR5 140 aa7.27□□□□□ -1.25
PDXDC1-216ENST00000569715 LINC00158P58513 81 aa7.26□□□□□ -1.25
PDXDC1-216ENST00000569715 VPS13DQ5THJ4 4388 aa7.26□□□□□ -1.25
PDXDC1-216ENST00000569715 WFDC2Q14508 124 aa7.26□□□□□ -1.25
PDXDC1-216ENST00000569715 UNQ6190/PRO20217Q6UXQ8 127 aa7.26□□□□□ -1.25
PDXDC1-216ENST00000569715 CXCL5P42830 114 aa7.25□□□□□ -1.25
PDXDC1-216ENST00000569715 IFITM1P13164 125 aa7.24□□□□□ -1.25
PDXDC1-216ENST00000569715 PGPEP1Q9NXJ5 209 aa7.24□□□□□ -1.25
PDXDC1-216ENST00000569715 NTN5Q8WTR8 489 aaPredicted RBP7.24□□□□□ -1.25
PDXDC1-216ENST00000569715 TSPAN13O95857 204 aa7.23□□□□□ -1.25
PDXDC1-216ENST00000569715 LYRM7Q5U5X0 104 aa7.23□□□□□ -1.25
PDXDC1-216ENST00000569715 A0A0B4J2C4 111 aa7.22□□□□□ -1.25
PDXDC1-216ENST00000569715 ZNF561-AS1K7EIQ3 104 aa7.22□□□□□ -1.25
PDXDC1-216ENST00000569715 C6orf48Q9UBA6 75 aa7.22□□□□□ -1.25
PDXDC1-216ENST00000569715 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.22□□□□□ -1.25
PDXDC1-216ENST00000569715 PRO1854Q9UHT4 67 aa7.22□□□□□ -1.25
PDXDC1-216ENST00000569715 LECT2O14960 151 aa7.21□□□□□ -1.26
PDXDC1-216ENST00000569715 GVQW2A0A096LPI5 108 aaPredicted RBP7.2□□□□□ -1.26
PDXDC1-216ENST00000569715 Q6ZRU5 148 aa7.2□□□□□ -1.26
PDXDC1-216ENST00000569715 CAMK2N2Q96S95 79 aa7.2□□□□□ -1.26
PDXDC1-216ENST00000569715 USP17L23D6RBM5 183 aa7.2□□□□□ -1.26
PDXDC1-216ENST00000569715 MUC7Q8TAX7 377 aa7.2□□□□□ -1.26
PDXDC1-216ENST00000569715 RMI2Q96E14 147 aa7.19□□□□□ -1.26
PDXDC1-216ENST00000569715 SND1-IT1Q9HBX3 110 aa7.19□□□□□ -1.26
PDXDC1-216ENST00000569715 KMT2AQ03164 3969 aa7.19□□□□□ -1.26
PDXDC1-216ENST00000569715 F8W1H4 67 aa7.19□□□□□ -1.26
PDXDC1-216ENST00000569715 COX17Q14061 63 aa7.19□□□□□ -1.26
PDXDC1-216ENST00000569715 COPS9Q8WXC6 57 aa7.18□□□□□ -1.26
PDXDC1-216ENST00000569715 ANAPC13Q9BS18 74 aa7.18□□□□□ -1.26
PDXDC1-216ENST00000569715 IGKV2-28A0A075B6P5 120 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms