RNA–Protein interactions for RNA: ENST00000569422.1

LINC00558-201, long intergenic non-protein coding RNA 558, humanhuman

TSL 1 (best) BASIC

Gene LINC00558, Length 3,163 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00558-201ENST00000569422 CSNK1G2-AS1Q8NCQ2 148 aa6.18□□□□□ -1.42
LINC00558-201ENST00000569422 A0A0U1RQV1 116 aa6.18□□□□□ -1.42
LINC00558-201ENST00000569422 TEN1Q86WV5 123 aa6.18□□□□□ -1.42
LINC00558-201ENST00000569422 ICOSQ9Y6W8 199 aa6.18□□□□□ -1.42
LINC00558-201ENST00000569422 TENM1Q9UKZ4 2725 aa6.18□□□□□ -1.42
LINC00558-201ENST00000569422 CMC4P56277 68 aaPredicted RBP6.18□□□□□ -1.42
LINC00558-201ENST00000569422 TRRAPQ9Y4A5 3859 aa6.18□□□□□ -1.42
LINC00558-201ENST00000569422 FHL2Q14192 279 aa6.17□□□□□ -1.42
LINC00558-201ENST00000569422 C5orf38Q86SI9 138 aa6.17□□□□□ -1.42
LINC00558-201ENST00000569422 NTN5Q8WTR8 489 aaPredicted RBP6.17□□□□□ -1.42
LINC00558-201ENST00000569422 SPANXDQ9BXN6 97 aa6.17□□□□□ -1.42
LINC00558-201ENST00000569422 NDUFA1O15239 70 aa6.17□□□□□ -1.42
LINC00558-201ENST00000569422 ATXN8Q156A1 80 aa6.17□□□□□ -1.42
LINC00558-201ENST00000569422 LINC00308Q8TCZ7 52 aa6.16□□□□□ -1.42
LINC00558-201ENST00000569422 PPDPFLQ8WWR9 84 aa6.16□□□□□ -1.42
LINC00558-201ENST00000569422 COX6CP09669 75 aa6.16□□□□□ -1.42
LINC00558-201ENST00000569422 GYPEP15421 78 aa6.16□□□□□ -1.42
LINC00558-201ENST00000569422 DEFB135Q30KP9 77 aa6.16□□□□□ -1.42
LINC00558-201ENST00000569422 SBSPONQ8IVN8 264 aa6.16□□□□□ -1.42
LINC00558-201ENST00000569422 IGLV5-45A0A087WSX0 123 aa6.16□□□□□ -1.42
LINC00558-201ENST00000569422 TEX49A0A1B0GTD5 131 aa6.16□□□□□ -1.42
LINC00558-201ENST00000569422 TRBV6-4A0A1B0GX49 114 aa6.16□□□□□ -1.42
LINC00558-201ENST00000569422 NDUFC2O95298 119 aa6.16□□□□□ -1.42
LINC00558-201ENST00000569422 APOC4P55056 127 aa6.16□□□□□ -1.42
LINC00558-201ENST00000569422 C9orf153Q5TBE3 101 aa6.16□□□□□ -1.42
LINC00558-201ENST00000569422 SOSTDC1Q6X4U4 206 aa6.15□□□□□ -1.42
LINC00558-201ENST00000569422 MRPL55Q7Z7F7 128 aaKnown RBP6.15□□□□□ -1.42
LINC00558-201ENST00000569422 TRBV6-8A0A0A6YYG3 113 aa6.15□□□□□ -1.43
LINC00558-201ENST00000569422 IGLV5-39A0A0G2JS06 123 aa6.15□□□□□ -1.43
LINC00558-201ENST00000569422 HTN3P15516 51 aa6.14□□□□□ -1.43
LINC00558-201ENST00000569422 XCL1P47992 114 aa6.14□□□□□ -1.43
LINC00558-201ENST00000569422 C2orf82Q6UX34 121 aa6.14□□□□□ -1.43
LINC00558-201ENST00000569422 C3orf22Q8N5N4 141 aa6.14□□□□□ -1.43
LINC00558-201ENST00000569422 KLK5Q9Y337 293 aaPredicted RBP6.14□□□□□ -1.43
LINC00558-201ENST00000569422 BAHCC1Q9P281 2608 aa6.14□□□□□ -1.43
LINC00558-201ENST00000569422 TRBV30A0A0K0K1B3 111 aa6.14□□□□□ -1.43
LINC00558-201ENST00000569422 FAM240AA0A1B0GVK7 77 aa6.14□□□□□ -1.43
LINC00558-201ENST00000569422 OVOL2Q9BRP0 275 aa6.14□□□□□ -1.43
LINC00558-201ENST00000569422 LINC00158P58513 81 aa6.14□□□□□ -1.43
LINC00558-201ENST00000569422 FAM222AQ5U5X8 452 aa6.14□□□□□ -1.43
LINC00558-201ENST00000569422 LINC00526Q96FQ7 95 aa6.14□□□□□ -1.43
LINC00558-201ENST00000569422 A0A0A0MQY5 61 aa6.13□□□□□ -1.43
LINC00558-201ENST00000569422 J3QL48 77 aa6.13□□□□□ -1.43
LINC00558-201ENST00000569422 MIR7-3HGQ8N6C7 128 aa6.13□□□□□ -1.43
LINC00558-201ENST00000569422 COX7B2Q8TF08 81 aa6.12□□□□□ -1.43
LINC00558-201ENST00000569422 HIVEP1P15822 2718 aa6.12□□□□□ -1.43
LINC00558-201ENST00000569422 KMT2BQ9UMN6 2715 aaPredicted RBP6.12□□□□□ -1.43
LINC00558-201ENST00000569422 IGLV10-54A0A075B6I4 117 aa6.12□□□□□ -1.43
LINC00558-201ENST00000569422 H7C423 109 aa6.12□□□□□ -1.43
LINC00558-201ENST00000569422 Q8N3U1 123 aa6.12□□□□□ -1.43
LINC00558-201ENST00000569422 NSD1Q96L73 2696 aaPredicted RBP6.12□□□□□ -1.43
LINC00558-201ENST00000569422 UQCRQO14949 82 aa6.12□□□□□ -1.43
LINC00558-201ENST00000569422 SNCGO76070 127 aa6.12□□□□□ -1.43
LINC00558-201ENST00000569422 TRBV10-2A0A0K0K1G8 114 aa6.11□□□□□ -1.43
LINC00558-201ENST00000569422 TIMM17BO60830 172 aa6.11□□□□□ -1.43
LINC00558-201ENST00000569422 X6R8D5 127 aa6.11□□□□□ -1.43
LINC00558-201ENST00000569422 TMEM258P61165 79 aa6.11□□□□□ -1.43
LINC00558-201ENST00000569422 PAX4O43316 350 aa6.1□□□□□ -1.43
LINC00558-201ENST00000569422 UBE2WQ96B02 151 aa6.1□□□□□ -1.43
LINC00558-201ENST00000569422 LINC00959A0A1B0GUT2 108 aa6.09□□□□□ -1.43
LINC00558-201ENST00000569422 GAGE2AQ6NT46 116 aa6.09□□□□□ -1.43
LINC00558-201ENST00000569422 TEP1Q99973 2627 aaKnown RBP6.09□□□□□ -1.43
LINC00558-201ENST00000569422 IGHV3OR16-9A0A0B4J2B5 98 aa6.09□□□□□ -1.43
LINC00558-201ENST00000569422 LST1O00453 97 aa6.09□□□□□ -1.43
LINC00558-201ENST00000569422 Q6ZRU5 148 aa6.09□□□□□ -1.43
LINC00558-201ENST00000569422 SND1-IT1Q9HBX3 110 aa6.09□□□□□ -1.43
LINC00558-201ENST00000569422 PRO0255Q9UI72 69 aa6.09□□□□□ -1.43
LINC00558-201ENST00000569422 GHRHP01286 108 aa6.08□□□□□ -1.44
LINC00558-201ENST00000569422 ATP5G1P05496 136 aa6.08□□□□□ -1.44
LINC00558-201ENST00000569422 CRYGAP11844 174 aa6.08□□□□□ -1.44
LINC00558-201ENST00000569422 C9orf66Q5T8R8 295 aa6.08□□□□□ -1.44
LINC00558-201ENST00000569422 Q9HAA7 133 aa6.08□□□□□ -1.44
LINC00558-201ENST00000569422 IGHV4-28A0A0C4DH34 117 aa6.08□□□□□ -1.44
LINC00558-201ENST00000569422 DAD1P61803 113 aa6.08□□□□□ -1.44
LINC00558-201ENST00000569422 LINC00269Q8N2A0 174 aa6.08□□□□□ -1.44
LINC00558-201ENST00000569422 TRAV8-4A0A0B4J246 113 aa6.08□□□□□ -1.44
LINC00558-201ENST00000569422 ANGP03950 147 aaKnown RBP6.08□□□□□ -1.44
LINC00558-201ENST00000569422 FAM19A3Q7Z5A8 133 aa6.08□□□□□ -1.44
LINC00558-201ENST00000569422 BRK1Q8WUW1 75 aa6.08□□□□□ -1.44
LINC00558-201ENST00000569422 CELA1Q9UNI1 258 aa6.08□□□□□ -1.44
LINC00558-201ENST00000569422 CRPP02741 224 aa6.07□□□□□ -1.44
LINC00558-201ENST00000569422 SS18Q15532 418 aa6.07□□□□□ -1.44
LINC00558-201ENST00000569422 LINC00337Q8N6G1 96 aa6.07□□□□□ -1.44
LINC00558-201ENST00000569422 COPS9Q8WXC6 57 aa6.06□□□□□ -1.44
LINC00558-201ENST00000569422 FAM218AQ96MZ4 157 aa6.06□□□□□ -1.44
LINC00558-201ENST00000569422 RBM12B-AS1Q9P1G2 102 aa6.06□□□□□ -1.44
LINC00558-201ENST00000569422 A0A087WZ39 114 aa6.06□□□□□ -1.44
LINC00558-201ENST00000569422 COX7A2LO14548 114 aa6.06□□□□□ -1.44
LINC00558-201ENST00000569422 CCL18P55774 89 aa6.06□□□□□ -1.44
LINC00558-201ENST00000569422 PRR3P79522 188 aaKnown RBP6.06□□□□□ -1.44
LINC00558-201ENST00000569422 MAST4O15021 2626 aa6.05□□□□□ -1.44
LINC00558-201ENST00000569422 EPM2AB3EWF7 344 aa6.05□□□□□ -1.44
LINC00558-201ENST00000569422 F8P00451 2351 aa6.05□□□□□ -1.44
LINC00558-201ENST00000569422 IGKV2-28A0A075B6P5 120 aa6.05□□□□□ -1.44
LINC00558-201ENST00000569422 IGKV2D-28P01615 120 aa6.05□□□□□ -1.44
LINC00558-201ENST00000569422 C9orf116Q5BN46 136 aaPredicted RBP6.05□□□□□ -1.44
LINC00558-201ENST00000569422 RPL18AQ02543 176 aaKnown RBP6.04□□□□□ -1.44
LINC00558-201ENST00000569422 C8orf87E5RJ46 101 aa6.04□□□□□ -1.44
LINC00558-201ENST00000569422 H3BT86 120 aa6.04□□□□□ -1.44
LINC00558-201ENST00000569422 BAALC-AS2P0C853 105 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms