RNA–Protein interactions for RNA: ENST00000568919.1

SIN3A-212, Transcript of SIN3 transcription regulator family member A, humanhuman

TSL 2

Gene SIN3A, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-212ENST00000568919 APOC3P02656 99 aa11.18□□□□□ -0.62
SIN3A-212ENST00000568919 CKS1BP61024 79 aa11.18□□□□□ -0.62
SIN3A-212ENST00000568919 Q8IZM0 81 aa11.18□□□□□ -0.62
SIN3A-212ENST00000568919 LINC01600Q96MT4 127 aa11.18□□□□□ -0.62
SIN3A-212ENST00000568919 NDUFC2-KCTD14E9PQ53 114 aa11.17□□□□□ -0.62
SIN3A-212ENST00000568919 KRTAP7-1Q8IUC3 87 aa11.17□□□□□ -0.62
SIN3A-212ENST00000568919 CST9LQ9H4G1 147 aa11.17□□□□□ -0.62
SIN3A-212ENST00000568919 SMCO4Q9NRQ5 59 aa11.17□□□□□ -0.62
SIN3A-212ENST00000568919 TINCRA0A1B0GVN0 87 aa11.16□□□□□ -0.62
SIN3A-212ENST00000568919 FAM19A5Q7Z5A7 132 aaPredicted RBP11.16□□□□□ -0.62
SIN3A-212ENST00000568919 TRAPPC1Q9Y5R8 145 aa11.16□□□□□ -0.62
SIN3A-212ENST00000568919 C9orf129Q5T035 196 aaKnown RBP11.15□□□□□ -0.62
SIN3A-212ENST00000568919 LINC00469Q8N7U9 141 aa11.15□□□□□ -0.62
SIN3A-212ENST00000568919 C1orf137Q5JT78 98 aa11.14□□□□□ -0.63
SIN3A-212ENST00000568919 REG3GQ6UW15 175 aa11.14□□□□□ -0.63
SIN3A-212ENST00000568919 KRTAP11-1Q8IUC1 163 aa11.14□□□□□ -0.63
SIN3A-212ENST00000568919 IGLV5-45A0A087WSX0 123 aa11.13□□□□□ -0.63
SIN3A-212ENST00000568919 SNAPINO95295 136 aa11.13□□□□□ -0.63
SIN3A-212ENST00000568919 PMVKQ15126 192 aa11.13□□□□□ -0.63
SIN3A-212ENST00000568919 SVBPQ8N300 66 aa11.13□□□□□ -0.63
SIN3A-212ENST00000568919 URB1-AS1Q96HZ7 61 aa11.13□□□□□ -0.63
SIN3A-212ENST00000568919 HMCN2Q8NDA2 5059 aa11.12□□□□□ -0.63
SIN3A-212ENST00000568919 SMIM1B2RUZ4 78 aa11.12□□□□□ -0.63
SIN3A-212ENST00000568919 LINC00614P0C842 121 aa11.12□□□□□ -0.63
SIN3A-212ENST00000568919 NDUFA5Q16718 116 aa11.12□□□□□ -0.63
SIN3A-212ENST00000568919 C18orf32Q8TCD1 76 aa11.12□□□□□ -0.63
SIN3A-212ENST00000568919 PLA2G2DQ9UNK4 145 aa11.12□□□□□ -0.63
SIN3A-212ENST00000568919 TNXBP22105 4242 aa11.11□□□□□ -0.63
SIN3A-212ENST00000568919 F8VRH5 84 aa11.11□□□□□ -0.63
SIN3A-212ENST00000568919 KRTAP10-8P60410 259 aa11.11□□□□□ -0.63
SIN3A-212ENST00000568919 PDZD11Q5EBL8 140 aa11.11□□□□□ -0.63
SIN3A-212ENST00000568919 A0A096LNJ9 63 aa11.1□□□□□ -0.63
SIN3A-212ENST00000568919 M0QXV9 152 aa11.09□□□□□ -0.63
SIN3A-212ENST00000568919 IGLV7-43P04211 117 aa11.09□□□□□ -0.63
SIN3A-212ENST00000568919 CXCL5P42830 114 aa11.09□□□□□ -0.63
SIN3A-212ENST00000568919 COX7B2Q8TF08 81 aa11.09□□□□□ -0.63
SIN3A-212ENST00000568919 SPINK8P0C7L1 97 aa11.08□□□□□ -0.64
SIN3A-212ENST00000568919 PMCHL1Q16048 86 aa11.07□□□□□ -0.64
SIN3A-212ENST00000568919 YPEL4Q96NS1 127 aa11.07□□□□□ -0.64
SIN3A-212ENST00000568919 XAGE1AQ9HD64 81 aa11.07□□□□□ -0.64
SIN3A-212ENST00000568919 HBDP02042 147 aa11.06□□□□□ -0.64
SIN3A-212ENST00000568919 NDUFA6P56556 154 aa11.06□□□□□ -0.64
SIN3A-212ENST00000568919 UBE2BP63146 152 aa11.06□□□□□ -0.64
SIN3A-212ENST00000568919 IGLC3P0DOY3 106 aa11.05□□□□□ -0.64
SIN3A-212ENST00000568919 RAB5BP61020 215 aa11.05□□□□□ -0.64
SIN3A-212ENST00000568919 C22orf24Q9Y442 160 aa11.05□□□□□ -0.64
SIN3A-212ENST00000568919 H3BRM9 83 aa11.04□□□□□ -0.64
SIN3A-212ENST00000568919 ODF1Q14990 250 aa11.04□□□□□ -0.64
SIN3A-212ENST00000568919 DIRC1Q969H9 104 aa11.03□□□□□ -0.64
SIN3A-212ENST00000568919 ATP5LO75964 103 aa11.01□□□□□ -0.65
SIN3A-212ENST00000568919 ZNF22P17026 224 aaPredicted RBP11.01□□□□□ -0.65
SIN3A-212ENST00000568919 LBHQ53QV2 105 aaPredicted RBP11□□□□□ -0.65
SIN3A-212ENST00000568919 BAGE3Q86Y29 109 aa11□□□□□ -0.65
SIN3A-212ENST00000568919 IGLV5-39A0A0G2JS06 123 aa10.99□□□□□ -0.65
SIN3A-212ENST00000568919 H0Y9J4 135 aa10.99□□□□□ -0.65
SIN3A-212ENST00000568919 TP73-AS1Q9UF72 201 aa10.98□□□□□ -0.65
SIN3A-212ENST00000568919 C11orf86A6NJI1 115 aa10.97□□□□□ -0.65
SIN3A-212ENST00000568919 CBLN2Q8IUK8 224 aa10.97□□□□□ -0.65
SIN3A-212ENST00000568919 CHCHD1Q96BP2 118 aaKnown RBP10.97□□□□□ -0.65
SIN3A-212ENST00000568919 MRPL55Q7Z7F7 128 aaKnown RBP10.96□□□□□ -0.65
SIN3A-212ENST00000568919 NUPR1O60356 82 aa10.94□□□□□ -0.66
SIN3A-212ENST00000568919 PFN2P35080 140 aa10.94□□□□□ -0.66
SIN3A-212ENST00000568919 TMEM170BQ5T4T1 132 aa10.94□□□□□ -0.66
SIN3A-212ENST00000568919 PRR26Q8N8Z3 221 aa10.94□□□□□ -0.66
SIN3A-212ENST00000568919 LINC00167Q96N53 147 aa10.94□□□□□ -0.66
SIN3A-212ENST00000568919 CHTOPQ9Y3Y2 248 aaKnown RBP10.94□□□□□ -0.66
SIN3A-212ENST00000568919 ZNF861PO60384 105 aa10.93□□□□□ -0.66
SIN3A-212ENST00000568919 SLC7A5P1Q8MH63 180 aa10.93□□□□□ -0.66
SIN3A-212ENST00000568919 UBR4Q5T4S7 5183 aa10.93□□□□□ -0.66
SIN3A-212ENST00000568919 IGLV5-37A0A075B6J1 123 aa10.92□□□□□ -0.66
SIN3A-212ENST00000568919 RPL37AP8A6NKH3 93 aa10.92□□□□□ -0.66
SIN3A-212ENST00000568919 KRTAP1-4P0C5Y4 121 aa10.92□□□□□ -0.66
SIN3A-212ENST00000568919 IFI27L1Q96BM0 104 aa10.92□□□□□ -0.66
SIN3A-212ENST00000568919 TRAV12-1A0A0B4J245 112 aa10.91□□□□□ -0.66
SIN3A-212ENST00000568919 ERG28Q9UKR5 140 aa10.91□□□□□ -0.66
SIN3A-212ENST00000568919 GAGE10A6NGK3 116 aa10.9□□□□□ -0.66
SIN3A-212ENST00000568919 TRGC2P03986 189 aa10.9□□□□□ -0.66
SIN3A-212ENST00000568919 FAM19A2Q8N3H0 131 aa10.9□□□□□ -0.66
SIN3A-212ENST00000568919 ZNF625Q96I27 306 aaPredicted RBP10.9□□□□□ -0.66
SIN3A-212ENST00000568919 COX17Q14061 63 aa10.89□□□□□ -0.67
SIN3A-212ENST00000568919 IGLV1-50A0A075B6I6 118 aa10.88□□□□□ -0.67
SIN3A-212ENST00000568919 TMEM223A0PJW6 202 aa10.88□□□□□ -0.67
SIN3A-212ENST00000568919 BCE1O60756 84 aa10.88□□□□□ -0.67
SIN3A-212ENST00000568919 HSBP1O75506 76 aa10.88□□□□□ -0.67
SIN3A-212ENST00000568919 NKAPP1Q8N9T2 125 aa10.88□□□□□ -0.67
SIN3A-212ENST00000568919 SND1-IT1Q9HBX3 110 aa10.88□□□□□ -0.67
SIN3A-212ENST00000568919 SCO1O75880 301 aa10.86□□□□□ -0.67
SIN3A-212ENST00000568919 SFTA2Q6UW10 78 aa10.86□□□□□ -0.67
SIN3A-212ENST00000568919 RPL28P46779 137 aaKnown RBP10.85□□□□□ -0.67
SIN3A-212ENST00000568919 VPREB1P12018 145 aa10.84□□□□□ -0.67
SIN3A-212ENST00000568919 COLCA2A8K830 154 aa10.83□□□□□ -0.68
SIN3A-212ENST00000568919 SERF1AO75920 110 aa10.83□□□□□ -0.68
SIN3A-212ENST00000568919 LINC00310P59036 64 aa10.83□□□□□ -0.68
SIN3A-212ENST00000568919 LINC00158P58513 81 aa10.82□□□□□ -0.68
SIN3A-212ENST00000568919 RPL24P83731 157 aaKnown RBP10.82□□□□□ -0.68
SIN3A-212ENST00000568919 Q8NDZ9 215 aa10.82□□□□□ -0.68
SIN3A-212ENST00000568919 IGKV2-28A0A075B6P5 120 aa10.81□□□□□ -0.68
SIN3A-212ENST00000568919 LEPROTL1O95214 131 aa10.81□□□□□ -0.68
SIN3A-212ENST00000568919 IGKV2D-28P01615 120 aa10.81□□□□□ -0.68
SIN3A-212ENST00000568919 H0Y8G0 127 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms