RNA–Protein interactions for RNA: ENST00000568848.5

USB1-214, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 548 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-214ENST00000568848 S100PP25815 95 aa8.74□□□□□ -1.01
USB1-214ENST00000568848 C10orf91Q5T1B1 145 aa8.74□□□□□ -1.01
USB1-214ENST00000568848 AMELXQ99217 191 aa8.74□□□□□ -1.01
USB1-214ENST00000568848 RPS10P5Q9NQ39 176 aa8.74□□□□□ -1.01
USB1-214ENST00000568848 RPL13AP40429 203 aaKnown RBP8.73□□□□□ -1.01
USB1-214ENST00000568848 GNB1LQ9BYB4 327 aa8.73□□□□□ -1.01
USB1-214ENST00000568848 VCX2Q9H322 139 aa8.73□□□□□ -1.01
USB1-214ENST00000568848 K7EMI3 77 aa8.72□□□□□ -1.01
USB1-214ENST00000568848 Q6ZN92 141 aa8.72□□□□□ -1.01
USB1-214ENST00000568848 C2orf88Q9BSF0 95 aa8.72□□□□□ -1.01
USB1-214ENST00000568848 CARHSP1Q9Y2V2 147 aaKnown RBP8.72□□□□□ -1.01
USB1-214ENST00000568848 ZNF861PO60384 105 aa8.71□□□□□ -1.02
USB1-214ENST00000568848 TOMM6Q96B49 74 aa8.71□□□□□ -1.02
USB1-214ENST00000568848 ALKBH7Q9BT30 221 aaPredicted RBP8.71□□□□□ -1.02
USB1-214ENST00000568848 F8WDY8 70 aa8.7□□□□□ -1.02
USB1-214ENST00000568848 MRPL18Q9H0U6 180 aaKnown RBP8.7□□□□□ -1.02
USB1-214ENST00000568848 XAGE1AQ9HD64 81 aa8.7□□□□□ -1.02
USB1-214ENST00000568848 FABP9Q0Z7S8 132 aa8.69□□□□□ -1.02
USB1-214ENST00000568848 NPSP0C0P6 89 aa8.68□□□□□ -1.02
USB1-214ENST00000568848 RHEBQ15382 184 aa8.68□□□□□ -1.02
USB1-214ENST00000568848 FAM19A3Q7Z5A8 133 aa8.68□□□□□ -1.02
USB1-214ENST00000568848 SCGB3A1Q96QR1 104 aa8.68□□□□□ -1.02
USB1-214ENST00000568848 TIMM17AQ99595 171 aa8.68□□□□□ -1.02
USB1-214ENST00000568848 C22orf24Q9Y442 160 aa8.68□□□□□ -1.02
USB1-214ENST00000568848 NDUFC2-KCTD14E9PQ53 114 aa8.67□□□□□ -1.02
USB1-214ENST00000568848 G0S2P27469 103 aa8.67□□□□□ -1.02
USB1-214ENST00000568848 COX19Q49B96 90 aa8.67□□□□□ -1.02
USB1-214ENST00000568848 KRTAP13-2Q52LG2 175 aa8.67□□□□□ -1.02
USB1-214ENST00000568848 ERASQ7Z444 233 aa8.67□□□□□ -1.02
USB1-214ENST00000568848 LINC01561Q8N1V8 128 aa8.67□□□□□ -1.02
USB1-214ENST00000568848 TYMSOSQ8TAI1 123 aa8.67□□□□□ -1.02
USB1-214ENST00000568848 TOMM7Q9P0U1 55 aa8.67□□□□□ -1.02
USB1-214ENST00000568848 CDKN2A-AS1Q9UH64 79 aa8.67□□□□□ -1.02
USB1-214ENST00000568848 LINC01546A6NGU7 62 aa8.66□□□□□ -1.02
USB1-214ENST00000568848 APOC3P02656 99 aa8.66□□□□□ -1.02
USB1-214ENST00000568848 PAPPA-AS1Q5QFB9 102 aa8.65□□□□□ -1.02
USB1-214ENST00000568848 FA2HQ7L5A8 372 aa8.65□□□□□ -1.02
USB1-214ENST00000568848 GEMIN7Q9H840 131 aaKnown RBP8.65□□□□□ -1.02
USB1-214ENST00000568848 FSIP2Q5CZC0 6907 aa8.65□□□□□ -1.03
USB1-214ENST00000568848 TRBV30A0A0K0K1B3 111 aa8.64□□□□□ -1.03
USB1-214ENST00000568848 RPL37AP8A6NKH3 93 aa8.64□□□□□ -1.03
USB1-214ENST00000568848 HERVK_113P63121 156 aa8.64□□□□□ -1.03
USB1-214ENST00000568848 C6orf226Q5I0X4 101 aa8.64□□□□□ -1.03
USB1-214ENST00000568848 PACRGQ96M98 296 aaPredicted RBP8.64□□□□□ -1.03
USB1-214ENST00000568848 TRAPPC1Q9Y5R8 145 aa8.64□□□□□ -1.03
USB1-214ENST00000568848 GAGE10A6NGK3 116 aa8.63□□□□□ -1.03
USB1-214ENST00000568848 PRSS2P07478 247 aa8.63□□□□□ -1.03
USB1-214ENST00000568848 SMCO4Q9NRQ5 59 aa8.63□□□□□ -1.03
USB1-214ENST00000568848 CKS1BP61024 79 aa8.62□□□□□ -1.03
USB1-214ENST00000568848 SEC11AP67812 179 aa8.62□□□□□ -1.03
USB1-214ENST00000568848 Q8IZM0 81 aa8.62□□□□□ -1.03
USB1-214ENST00000568848 URB1-AS1Q96HZ7 61 aa8.62□□□□□ -1.03
USB1-214ENST00000568848 CST9LQ9H4G1 147 aa8.62□□□□□ -1.03
USB1-214ENST00000568848 SNAPINO95295 136 aa8.61□□□□□ -1.03
USB1-214ENST00000568848 CRYGAP11844 174 aa8.61□□□□□ -1.03
USB1-214ENST00000568848 C18orf32Q8TCD1 76 aa8.61□□□□□ -1.03
USB1-214ENST00000568848 CDIP1Q9H305 208 aa8.61□□□□□ -1.03
USB1-214ENST00000568848 A0A096LNJ9 63 aa8.6□□□□□ -1.03
USB1-214ENST00000568848 TINCRA0A1B0GVN0 87 aa8.6□□□□□ -1.03
USB1-214ENST00000568848 SCO1O75880 301 aa8.6□□□□□ -1.03
USB1-214ENST00000568848 LINC01549A6NIU2 74 aa8.59□□□□□ -1.03
USB1-214ENST00000568848 SMIM1B2RUZ4 78 aa8.59□□□□□ -1.03
USB1-214ENST00000568848 NUPR1O60356 82 aa8.59□□□□□ -1.03
USB1-214ENST00000568848 BCE1O60756 84 aa8.59□□□□□ -1.03
USB1-214ENST00000568848 PMVKQ15126 192 aa8.59□□□□□ -1.03
USB1-214ENST00000568848 PMCHL1Q16048 86 aa8.59□□□□□ -1.03
USB1-214ENST00000568848 NDUFA5Q16718 116 aa8.59□□□□□ -1.03
USB1-214ENST00000568848 SVBPQ8N300 66 aa8.59□□□□□ -1.03
USB1-214ENST00000568848 SPINK8P0C7L1 97 aa8.58□□□□□ -1.04
USB1-214ENST00000568848 LINC00614P0C842 121 aa8.58□□□□□ -1.04
USB1-214ENST00000568848 MRPL55Q7Z7F7 128 aaKnown RBP8.58□□□□□ -1.04
USB1-214ENST00000568848 LINC00167Q96N53 147 aa8.58□□□□□ -1.04
USB1-214ENST00000568848 IGLV7-46A0A075B6I9 117 aa8.57□□□□□ -1.04
USB1-214ENST00000568848 IGLV5-45A0A087WSX0 123 aa8.57□□□□□ -1.04
USB1-214ENST00000568848 RPL28P46779 137 aaKnown RBP8.57□□□□□ -1.04
USB1-214ENST00000568848 NDUFA6P56556 154 aa8.57□□□□□ -1.04
USB1-214ENST00000568848 PDZD11Q5EBL8 140 aa8.57□□□□□ -1.04
USB1-214ENST00000568848 COX7B2Q8TF08 81 aa8.57□□□□□ -1.04
USB1-214ENST00000568848 F8VRH5 84 aa8.56□□□□□ -1.04
USB1-214ENST00000568848 LINC00304Q8N9R0 145 aa8.56□□□□□ -1.04
USB1-214ENST00000568848 YPEL4Q96NS1 127 aa8.56□□□□□ -1.04
USB1-214ENST00000568848 KRTAP4-1Q9BYQ7 146 aa8.56□□□□□ -1.04
USB1-214ENST00000568848 LBHQ53QV2 105 aaPredicted RBP8.55□□□□□ -1.04
USB1-214ENST00000568848 HBDP02042 147 aa8.54□□□□□ -1.04
USB1-214ENST00000568848 KRTAP13-1Q8IUC0 172 aa8.54□□□□□ -1.04
USB1-214ENST00000568848 IGLC3P0DOY3 106 aa8.53□□□□□ -1.04
USB1-214ENST00000568848 CXCL5P42830 114 aa8.53□□□□□ -1.04
USB1-214ENST00000568848 RAB5BP61020 215 aa8.53□□□□□ -1.04
USB1-214ENST00000568848 PRLHP81277 87 aa8.53□□□□□ -1.04
USB1-214ENST00000568848 TPRXLQ17RH7 258 aa8.53□□□□□ -1.04
USB1-214ENST00000568848 CBLN2Q8IUK8 224 aa8.52□□□□□ -1.05
USB1-214ENST00000568848 C3orf22Q8N5N4 141 aa8.52□□□□□ -1.05
USB1-214ENST00000568848 IGKV2-28A0A075B6P5 120 aa8.51□□□□□ -1.05
USB1-214ENST00000568848 H3BRM9 83 aa8.51□□□□□ -1.05
USB1-214ENST00000568848 IGKV2D-28P01615 120 aa8.51□□□□□ -1.05
USB1-214ENST00000568848 ZNF22P17026 224 aaPredicted RBP8.51□□□□□ -1.05
USB1-214ENST00000568848 UBE2AP49459 152 aa8.51□□□□□ -1.05
USB1-214ENST00000568848 PPDPFQ9H3Y8 114 aa8.51□□□□□ -1.05
USB1-214ENST00000568848 BAGE3Q86Y29 109 aa8.5□□□□□ -1.05
USB1-214ENST00000568848 SLC7A5P1Q8MH63 180 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms