RNA–Protein interactions for RNA: ENST00000568744.1

CYLD-213, Transcript of CYLD lysine 63 deubiquitinase, humanhuman

TSL 2

Gene CYLD, Length 370 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYLD-213ENST00000568744 SEC11AP67812 179 aa-0.73□□□□□ -2.53
CYLD-213ENST00000568744 APLNQ9ULZ1 77 aa-0.74□□□□□ -2.53
CYLD-213ENST00000568744 CNOT1A5YKK6 2376 aaKnown RBP-0.74□□□□□ -2.53
CYLD-213ENST00000568744 NLRP1Q9C000 1473 aa-0.74□□□□□ -2.53
CYLD-213ENST00000568744 ARHGAP5Q13017 1502 aa-0.74□□□□□ -2.53
CYLD-213ENST00000568744 NRKQ7Z2Y5 1582 aa-0.74□□□□□ -2.53
CYLD-213ENST00000568744 A0A0G2JMZ2 1700 aa-0.75□□□□□ -2.53
CYLD-213ENST00000568744 XRN1Q8IZH2 1706 aaKnown RBP-0.75□□□□□ -2.53
CYLD-213ENST00000568744 SNCAP37840 140 aa-0.75□□□□□ -2.53
CYLD-213ENST00000568744 EIF4G3O43432 1585 aaKnown RBP-0.75□□□□□ -2.53
CYLD-213ENST00000568744 MUC12Q9UKN1 5478 aa-0.76□□□□□ -2.53
CYLD-213ENST00000568744 CPSF4LA6NMK7 179 aaKnown RBP-0.76□□□□□ -2.53
CYLD-213ENST00000568744 LINC00846Q9NV44 126 aa-0.76□□□□□ -2.53
CYLD-213ENST00000568744 GNG8Q9UK08 70 aa-0.76□□□□□ -2.53
CYLD-213ENST00000568744 PLEKHH2Q8IVE3 1493 aa-0.76□□□□□ -2.53
CYLD-213ENST00000568744 MRC2Q9UBG0 1479 aa-0.76□□□□□ -2.53
CYLD-213ENST00000568744 NUP188Q5SRE5 1749 aa-0.76□□□□□ -2.53
CYLD-213ENST00000568744 PDZD2O15018 2839 aa-0.76□□□□□ -2.53
CYLD-213ENST00000568744 H3BQ15 152 aa-0.77□□□□□ -2.53
CYLD-213ENST00000568744 KRTDAPP60985 99 aa-0.77□□□□□ -2.53
CYLD-213ENST00000568744 FMN2Q9NZ56 1722 aa-0.78□□□□□ -2.53
CYLD-213ENST00000568744 MAPKBP1O60336 1514 aa-0.78□□□□□ -2.53
CYLD-213ENST00000568744 PZPP20742 1482 aa-0.78□□□□□ -2.53
CYLD-213ENST00000568744 A0A087WVE0 104 aa-0.78□□□□□ -2.53
CYLD-213ENST00000568744 A0A1B0GU69 56 aa-0.78□□□□□ -2.53
CYLD-213ENST00000568744 CCDC141Q6ZP82 1450 aa-0.79□□□□□ -2.54
CYLD-213ENST00000568744 ZFHX3Q15911 3703 aa-0.79□□□□□ -2.54
CYLD-213ENST00000568744 STAB2Q8WWQ8 2551 aa-0.8□□□□□ -2.54
CYLD-213ENST00000568744 MAP1AP78559 2803 aaPredicted RBP-0.8□□□□□ -2.54
CYLD-213ENST00000568744 MRPS10P82664 201 aaKnown RBP-0.8□□□□□ -2.54
CYLD-213ENST00000568744 TMEM203Q969S6 136 aa-0.8□□□□□ -2.54
CYLD-213ENST00000568744 CGREF1Q99674 301 aa-0.8□□□□□ -2.54
CYLD-213ENST00000568744 CC2D2AQ9P2K1 1620 aa-0.8□□□□□ -2.54
CYLD-213ENST00000568744 NBEAL1Q6ZS30 2694 aa-0.8□□□□□ -2.54
CYLD-213ENST00000568744 SPHKAPQ2M3C7 1700 aa-0.81□□□□□ -2.54
CYLD-213ENST00000568744 LRP1BQ9NZR2 4599 aa-0.81□□□□□ -2.54
CYLD-213ENST00000568744 GTF2H5Q6ZYL4 71 aa-0.81□□□□□ -2.54
CYLD-213ENST00000568744 C6orf201Q7Z4U5 140 aa-0.81□□□□□ -2.54
CYLD-213ENST00000568744 C2orf88Q9BSF0 95 aa-0.81□□□□□ -2.54
CYLD-213ENST00000568744 VAMP8Q9BV40 100 aa-0.81□□□□□ -2.54
CYLD-213ENST00000568744 hADV29S1A0JD25 119 aa-0.82□□□□□ -2.54
CYLD-213ENST00000568744 TMEM262E9PQX1 116 aa-0.82□□□□□ -2.54
CYLD-213ENST00000568744 CRIPTQ9P021 101 aa-0.82□□□□□ -2.54
CYLD-213ENST00000568744 C7orf77A4D0Y5 90 aa-0.83□□□□□ -2.54
CYLD-213ENST00000568744 HSD52Q0P140 79 aa-0.83□□□□□ -2.54
CYLD-213ENST00000568744 DEFB135Q30KP9 77 aa-0.83□□□□□ -2.54
CYLD-213ENST00000568744 PCNX1Q96RV3 2341 aa-0.83□□□□□ -2.54
CYLD-213ENST00000568744 NKTRP30414 1462 aaKnown RBP-0.84□□□□□ -2.54
CYLD-213ENST00000568744 H3BQF6 201 aa-0.84□□□□□ -2.54
CYLD-213ENST00000568744 I3L3M4 83 aa-0.84□□□□□ -2.54
CYLD-213ENST00000568744 SARNPP82979 210 aaKnown RBP-0.84□□□□□ -2.54
CYLD-213ENST00000568744 LINC00587B1AMM8 73 aa-0.85□□□□□ -2.55
CYLD-213ENST00000568744 H1FX-AS1Q4G0G2 97 aa-0.85□□□□□ -2.55
CYLD-213ENST00000568744 EDC4Q6P2E9 1401 aaKnown RBP-0.85□□□□□ -2.55
CYLD-213ENST00000568744 TOPAZ1Q8N9V7 1692 aa-0.85□□□□□ -2.55
CYLD-213ENST00000568744 PAPPA2Q9BXP8 1791 aa-0.85□□□□□ -2.55
CYLD-213ENST00000568744 CHD1O14646 1710 aa-0.86□□□□□ -2.55
CYLD-213ENST00000568744 MARF1Q9Y4F3 1742 aaKnown RBP-0.86□□□□□ -2.55
CYLD-213ENST00000568744 A0A0G2JND7 137 aa-0.86□□□□□ -2.55
CYLD-213ENST00000568744 DEFB107AQ8IZN7 70 aa-0.86□□□□□ -2.55
CYLD-213ENST00000568744 PDCD11Q14690 1871 aaKnown RBP-0.86□□□□□ -2.55
CYLD-213ENST00000568744 H0Y9P7 68 aa-0.87□□□□□ -2.55
CYLD-213ENST00000568744 ASIPP42127 132 aa-0.87□□□□□ -2.55
CYLD-213ENST00000568744 GNGT1P63211 74 aa-0.87□□□□□ -2.55
CYLD-213ENST00000568744 PSMG4Q5JS54 123 aa-0.87□□□□□ -2.55
CYLD-213ENST00000568744 CACFD1Q9UGQ2 172 aa-0.87□□□□□ -2.55
CYLD-213ENST00000568744 PRKDCP78527 4128 aaKnown RBP-0.87□□□□□ -2.55
CYLD-213ENST00000568744 COL4A6Q14031 1691 aa-0.88□□□□□ -2.55
CYLD-213ENST00000568744 ABCC5O15440 1437 aa-0.88□□□□□ -2.55
CYLD-213ENST00000568744 SPRR2AP35326 72 aa-0.88□□□□□ -2.55
CYLD-213ENST00000568744 FAM135AQ9P2D6 1515 aa-0.89□□□□□ -2.55
CYLD-213ENST00000568744 PMCHL1Q16048 86 aa-0.89□□□□□ -2.55
CYLD-213ENST00000568744 TRBV25-1A0A075B6N4 114 aa-0.9□□□□□ -2.55
CYLD-213ENST00000568744 C20orf202A1L168 122 aa-0.9□□□□□ -2.55
CYLD-213ENST00000568744 GNGT2O14610 69 aa-0.9□□□□□ -2.55
CYLD-213ENST00000568744 NDUFC1O43677 76 aa-0.9□□□□□ -2.55
CYLD-213ENST00000568744 KRTAP6-2Q3LI66 62 aa-0.9□□□□□ -2.55
CYLD-213ENST00000568744 SETD2Q9BYW2 2564 aaPredicted RBP-0.9□□□□□ -2.55
CYLD-213ENST00000568744 KNDC1Q76NI1 1749 aa-0.9□□□□□ -2.55
CYLD-213ENST00000568744 KRTAP19-8Q3LI54 63 aa-0.91□□□□□ -2.56
CYLD-213ENST00000568744 CREBBPQ92793 2442 aa-0.91□□□□□ -2.56
CYLD-213ENST00000568744 MLH3Q9UHC1 1453 aa-0.92□□□□□ -2.56
CYLD-213ENST00000568744 ABCA3Q99758 1704 aa-0.92□□□□□ -2.56
CYLD-213ENST00000568744 TARBP1Q13395 1621 aaKnown RBP-0.92□□□□□ -2.56
CYLD-213ENST00000568744 SLIT1O75093 1534 aa-0.92□□□□□ -2.56
CYLD-213ENST00000568744 ARMS2P0C7Q2 107 aa-0.92□□□□□ -2.56
CYLD-213ENST00000568744 LRRC37AA6NMS7 1700 aa-0.92□□□□□ -2.56
CYLD-213ENST00000568744 UQCRHP07919 91 aa-0.93□□□□□ -2.56
CYLD-213ENST00000568744 C9orf62Q8N4C0 152 aa-0.93□□□□□ -2.56
CYLD-213ENST00000568744 MRPL34Q9BQ48 92 aaKnown RBP-0.93□□□□□ -2.56
CYLD-213ENST00000568744 SVEP1Q4LDE5 3571 aa-0.93□□□□□ -2.56
CYLD-213ENST00000568744 PKHD1P08F94 4074 aa-0.94□□□□□ -2.56
CYLD-213ENST00000568744 CCL22O00626 93 aa-0.95□□□□□ -2.56
CYLD-213ENST00000568744 HEPN1Q6WQI6 88 aa-0.95□□□□□ -2.56
CYLD-213ENST00000568744 TRGV9Q99603 122 aa-0.95□□□□□ -2.56
CYLD-213ENST00000568744 ZFYVE16Q7Z3T8 1539 aa-0.95□□□□□ -2.56
CYLD-213ENST00000568744 FLGP20930 4061 aaPredicted RBP-0.96□□□□□ -2.56
CYLD-213ENST00000568744 SHPRHQ149N8 1683 aa-0.96□□□□□ -2.56
CYLD-213ENST00000568744 SPTY2D1-AS1A0A0U1RR47 76 aa-0.96□□□□□ -2.56
CYLD-213ENST00000568744 H7BZZ5 65 aa-0.96□□□□□ -2.56
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms