RNA–Protein interactions for RNA: ENST00000568586.5

RAB40C-211, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 648 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-211ENST00000568586 GAGE2EQ4V326 116 aa18.09■□□□□ 0.49
RAB40C-211ENST00000568586 C6orf226Q5I0X4 101 aa18.09■□□□□ 0.49
RAB40C-211ENST00000568586 FA2HQ7L5A8 372 aa18.09■□□□□ 0.49
RAB40C-211ENST00000568586 KRTAP7-1Q8IUC3 87 aa18.09■□□□□ 0.49
RAB40C-211ENST00000568586 GAGE2DQ9UEU5 116 aa18.09■□□□□ 0.49
RAB40C-211ENST00000568586 IGLV5-45A0A087WSX0 123 aa18.08■□□□□ 0.48
RAB40C-211ENST00000568586 TINCRA0A1B0GVN0 87 aa18.08■□□□□ 0.48
RAB40C-211ENST00000568586 CST9LQ9H4G1 147 aa18.08■□□□□ 0.48
RAB40C-211ENST00000568586 CKS1BP61024 79 aa18.07■□□□□ 0.48
RAB40C-211ENST00000568586 TOMM7Q9P0U1 55 aa18.07■□□□□ 0.48
RAB40C-211ENST00000568586 APOC3P02656 99 aa18.06■□□□□ 0.48
RAB40C-211ENST00000568586 REG3GQ6UW15 175 aa18.05■□□□□ 0.48
RAB40C-211ENST00000568586 SVBPQ8N300 66 aa18.05■□□□□ 0.48
RAB40C-211ENST00000568586 SMCO4Q9NRQ5 59 aa18.05■□□□□ 0.48
RAB40C-211ENST00000568586 SNAPINO95295 136 aa18.04■□□□□ 0.48
RAB40C-211ENST00000568586 PMVKQ15126 192 aa18.04■□□□□ 0.48
RAB40C-211ENST00000568586 C9orf129Q5T035 196 aaKnown RBP18.04■□□□□ 0.48
RAB40C-211ENST00000568586 TRAPPC1Q9Y5R8 145 aa18.04■□□□□ 0.48
RAB40C-211ENST00000568586 SMIM1B2RUZ4 78 aa18.03■□□□□ 0.48
RAB40C-211ENST00000568586 LINC00469Q8N7U9 141 aa18.03■□□□□ 0.48
RAB40C-211ENST00000568586 URB1-AS1Q96HZ7 61 aa18.03■□□□□ 0.48
RAB40C-211ENST00000568586 PDZD11Q5EBL8 140 aa18.02■□□□□ 0.48
RAB40C-211ENST00000568586 FAM19A5Q7Z5A7 132 aaPredicted RBP18.02■□□□□ 0.48
RAB40C-211ENST00000568586 C18orf32Q8TCD1 76 aa18.02■□□□□ 0.48
RAB40C-211ENST00000568586 A0A096LNJ9 63 aa18.01■□□□□ 0.47
RAB40C-211ENST00000568586 F8VRH5 84 aa18.01■□□□□ 0.47
RAB40C-211ENST00000568586 NDUFA5Q16718 116 aa18.01■□□□□ 0.47
RAB40C-211ENST00000568586 KRTAP11-1Q8IUC1 163 aa18.01■□□□□ 0.47
RAB40C-211ENST00000568586 CXCL5P42830 114 aa18■□□□□ 0.47
RAB40C-211ENST00000568586 KRTAP10-8P60410 259 aa18■□□□□ 0.47
RAB40C-211ENST00000568586 C1orf137Q5JT78 98 aa18■□□□□ 0.47
RAB40C-211ENST00000568586 LINC00614P0C842 121 aa17.99■□□□□ 0.47
RAB40C-211ENST00000568586 ODF1Q14990 250 aa17.99■□□□□ 0.47
RAB40C-211ENST00000568586 PLA2G2DQ9UNK4 145 aa17.99■□□□□ 0.47
RAB40C-211ENST00000568586 YPEL4Q96NS1 127 aa17.97■□□□□ 0.47
RAB40C-211ENST00000568586 M0QXV9 152 aa17.96■□□□□ 0.47
RAB40C-211ENST00000568586 IGLV7-43P04211 117 aa17.95■□□□□ 0.46
RAB40C-211ENST00000568586 COX7B2Q8TF08 81 aa17.94■□□□□ 0.46
RAB40C-211ENST00000568586 HBDP02042 147 aa17.92■□□□□ 0.46
RAB40C-211ENST00000568586 IGLC3P0DOY3 106 aa17.92■□□□□ 0.46
RAB40C-211ENST00000568586 RAB5BP61020 215 aa17.9■□□□□ 0.46
RAB40C-211ENST00000568586 SPINK8P0C7L1 97 aa17.89■□□□□ 0.45
RAB40C-211ENST00000568586 XAGE1AQ9HD64 81 aa17.89■□□□□ 0.45
RAB40C-211ENST00000568586 H3BRM9 83 aa17.88■□□□□ 0.45
RAB40C-211ENST00000568586 IGLV5-39A0A0G2JS06 123 aa17.87■□□□□ 0.45
RAB40C-211ENST00000568586 DIRC1Q969H9 104 aa17.87■□□□□ 0.45
RAB40C-211ENST00000568586 UBE2BP63146 152 aa17.86■□□□□ 0.45
RAB40C-211ENST00000568586 C22orf24Q9Y442 160 aa17.86■□□□□ 0.45
RAB40C-211ENST00000568586 ATP5LO75964 103 aa17.85■□□□□ 0.45
RAB40C-211ENST00000568586 PMCHL1Q16048 86 aa17.85■□□□□ 0.45
RAB40C-211ENST00000568586 TP73-AS1Q9UF72 201 aa17.84■□□□□ 0.45
RAB40C-211ENST00000568586 ZNF22P17026 224 aaPredicted RBP17.83■□□□□ 0.44
RAB40C-211ENST00000568586 H0Y9J4 135 aa17.82■□□□□ 0.44
RAB40C-211ENST00000568586 NDUFA6P56556 154 aa17.82■□□□□ 0.44
RAB40C-211ENST00000568586 LBHQ53QV2 105 aaPredicted RBP17.82■□□□□ 0.44
RAB40C-211ENST00000568586 UBR4Q5T4S7 5183 aa17.81■□□□□ 0.44
RAB40C-211ENST00000568586 CHCHD1Q96BP2 118 aaKnown RBP17.79■□□□□ 0.44
RAB40C-211ENST00000568586 BAGE3Q86Y29 109 aa17.78■□□□□ 0.44
RAB40C-211ENST00000568586 MRPL55Q7Z7F7 128 aaKnown RBP17.76■□□□□ 0.43
RAB40C-211ENST00000568586 C11orf86A6NJI1 115 aa17.75■□□□□ 0.43
RAB40C-211ENST00000568586 NUPR1O60356 82 aa17.75■□□□□ 0.43
RAB40C-211ENST00000568586 IGLV5-37A0A075B6J1 123 aa17.74■□□□□ 0.43
RAB40C-211ENST00000568586 CBLN2Q8IUK8 224 aa17.74■□□□□ 0.43
RAB40C-211ENST00000568586 KRTAP1-4P0C5Y4 121 aa17.72■□□□□ 0.43
RAB40C-211ENST00000568586 TRAV12-1A0A0B4J245 112 aa17.71■□□□□ 0.43
RAB40C-211ENST00000568586 ZNF861PO60384 105 aa17.71■□□□□ 0.43
RAB40C-211ENST00000568586 LINC00167Q96N53 147 aa17.69■□□□□ 0.42
RAB40C-211ENST00000568586 CHTOPQ9Y3Y2 248 aaKnown RBP17.69■□□□□ 0.42
RAB40C-211ENST00000568586 LRP2P98164 4655 aa17.69■□□□□ 0.42
RAB40C-211ENST00000568586 COX17Q14061 63 aa17.68■□□□□ 0.42
RAB40C-211ENST00000568586 TMEM170BQ5T4T1 132 aa17.68■□□□□ 0.42
RAB40C-211ENST00000568586 SFTA2Q6UW10 78 aa17.68■□□□□ 0.42
RAB40C-211ENST00000568586 IFI27L1Q96BM0 104 aa17.68■□□□□ 0.42
RAB40C-211ENST00000568586 PRR26Q8N8Z3 221 aa17.67■□□□□ 0.42
RAB40C-211ENST00000568586 IGLV1-50A0A075B6I6 118 aa17.66■□□□□ 0.42
RAB40C-211ENST00000568586 ERG28Q9UKR5 140 aa17.66■□□□□ 0.42
RAB40C-211ENST00000568586 ZNF625Q96I27 306 aaPredicted RBP17.65■□□□□ 0.42
RAB40C-211ENST00000568586 BCE1O60756 84 aa17.64■□□□□ 0.41
RAB40C-211ENST00000568586 PFN2P35080 140 aa17.64■□□□□ 0.41
RAB40C-211ENST00000568586 TRGC2P03986 189 aa17.63■□□□□ 0.41
RAB40C-211ENST00000568586 TMEM223A0PJW6 202 aa17.62■□□□□ 0.41
RAB40C-211ENST00000568586 SLC7A5P1Q8MH63 180 aa17.62■□□□□ 0.41
RAB40C-211ENST00000568586 SND1-IT1Q9HBX3 110 aa17.62■□□□□ 0.41
RAB40C-211ENST00000568586 HSBP1O75506 76 aa17.61■□□□□ 0.41
RAB40C-211ENST00000568586 RPL37AP8A6NKH3 93 aa17.6■□□□□ 0.41
RAB40C-211ENST00000568586 NKAPP1Q8N9T2 125 aa17.6■□□□□ 0.41
RAB40C-211ENST00000568586 FAM19A2Q8N3H0 131 aa17.59■□□□□ 0.41
RAB40C-211ENST00000568586 RPL28P46779 137 aaKnown RBP17.58■□□□□ 0.4
RAB40C-211ENST00000568586 GAGE10A6NGK3 116 aa17.57■□□□□ 0.4
RAB40C-211ENST00000568586 VPREB1P12018 145 aa17.57■□□□□ 0.4
RAB40C-211ENST00000568586 LINC00310P59036 64 aa17.57■□□□□ 0.4
RAB40C-211ENST00000568586 COLCA2A8K830 154 aa17.54■□□□□ 0.4
RAB40C-211ENST00000568586 RPL13AP40429 203 aaKnown RBP17.54■□□□□ 0.4
RAB40C-211ENST00000568586 KRTAP13-1Q8IUC0 172 aa17.54■□□□□ 0.4
RAB40C-211ENST00000568586 RPL24P83731 157 aaKnown RBP17.53■□□□□ 0.4
RAB40C-211ENST00000568586 SERF1AO75920 110 aa17.52■□□□□ 0.4
RAB40C-211ENST00000568586 SCO1O75880 301 aa17.51■□□□□ 0.39
RAB40C-211ENST00000568586 Q8NDZ9 215 aa17.5■□□□□ 0.39
RAB40C-211ENST00000568586 LEPROTL1O95214 131 aa17.49■□□□□ 0.39
RAB40C-211ENST00000568586 IGKV2-28A0A075B6P5 120 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms