RNA–Protein interactions for RNA: ENST00000568108.1

PTPN9-205, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

TSL 2

Gene PTPN9, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-205ENST00000568108 XGP55808 180 aa4.34□□□□□ -1.71
PTPN9-205ENST00000568108 TIRAPP58753 221 aa4.34□□□□□ -1.71
PTPN9-205ENST00000568108 UBE2D3P61077 147 aa4.34□□□□□ -1.71
PTPN9-205ENST00000568108 UBE2D2P62837 147 aa4.34□□□□□ -1.71
PTPN9-205ENST00000568108 Q6ZRN7 208 aaPredicted RBP4.34□□□□□ -1.71
PTPN9-205ENST00000568108 Q6ZSN1 163 aa4.34□□□□□ -1.71
PTPN9-205ENST00000568108 Q6ZTI0 123 aa4.34□□□□□ -1.71
PTPN9-205ENST00000568108 VSIG2Q96IQ7 327 aa4.34□□□□□ -1.71
PTPN9-205ENST00000568108 TMEM243Q9BU79 118 aa4.34□□□□□ -1.71
PTPN9-205ENST00000568108 CBY1Q9Y3M2 126 aa4.34□□□□□ -1.71
PTPN9-205ENST00000568108 FLG2Q5D862 2391 aaPredicted RBP4.34□□□□□ -1.72
PTPN9-205ENST00000568108 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.33□□□□□ -1.72
PTPN9-205ENST00000568108 A0A096LPF7 62 aa4.33□□□□□ -1.72
PTPN9-205ENST00000568108 IGKV2-29A2NJV5 120 aaPredicted RBP4.33□□□□□ -1.72
PTPN9-205ENST00000568108 UBE2D1P51668 147 aa4.33□□□□□ -1.72
PTPN9-205ENST00000568108 CIRBPQ14011 172 aaKnown RBP4.33□□□□□ -1.72
PTPN9-205ENST00000568108 Q6ZUT4 128 aa4.33□□□□□ -1.72
PTPN9-205ENST00000568108 FAM19A3Q7Z5A8 133 aa4.33□□□□□ -1.72
PTPN9-205ENST00000568108 DEFB104AQ8WTQ1 72 aa4.33□□□□□ -1.72
PTPN9-205ENST00000568108 OPRPNQ99935 248 aaPredicted RBP4.33□□□□□ -1.72
PTPN9-205ENST00000568108 HERC1Q15751 4861 aa4.33□□□□□ -1.72
PTPN9-205ENST00000568108 IGLV5-45A0A087WSX0 123 aa4.32□□□□□ -1.72
PTPN9-205ENST00000568108 IGHV3-38A0A0C4DH36 116 aa4.32□□□□□ -1.72
PTPN9-205ENST00000568108 GAGE12JA6NER3 117 aa4.32□□□□□ -1.72
PTPN9-205ENST00000568108 F8W1H4 67 aa4.32□□□□□ -1.72
PTPN9-205ENST00000568108 J3QR89 54 aa4.32□□□□□ -1.72
PTPN9-205ENST00000568108 K7ERJ3 54 aa4.32□□□□□ -1.72
PTPN9-205ENST00000568108 TIMM17BO60830 172 aa4.32□□□□□ -1.72
PTPN9-205ENST00000568108 IGHV3-30P01768 117 aa4.32□□□□□ -1.72
PTPN9-205ENST00000568108 IGHV3-30-3P0DP02 117 aa4.32□□□□□ -1.72
PTPN9-205ENST00000568108 IGHV3-30-5P0DP03 117 aa4.32□□□□□ -1.72
PTPN9-205ENST00000568108 KRTAP10-1P60331 282 aa4.32□□□□□ -1.72
PTPN9-205ENST00000568108 GAGE4Q13068 117 aa4.32□□□□□ -1.72
PTPN9-205ENST00000568108 GAGE5Q13069 117 aa4.32□□□□□ -1.72
PTPN9-205ENST00000568108 RNF151Q2KHN1 245 aa4.32□□□□□ -1.72
PTPN9-205ENST00000568108 Q5VSD8 79 aa4.32□□□□□ -1.72
PTPN9-205ENST00000568108 TRBV20-1A0A075B6N2 111 aa4.31□□□□□ -1.72
PTPN9-205ENST00000568108 A0A087WTM6 91 aa4.31□□□□□ -1.72
PTPN9-205ENST00000568108 A0A0B4J2C4 111 aa4.31□□□□□ -1.72
PTPN9-205ENST00000568108 A0A0J9YXY3 114 aa4.31□□□□□ -1.72
PTPN9-205ENST00000568108 PAX4O43316 350 aa4.31□□□□□ -1.72
PTPN9-205ENST00000568108 SMR3BP02814 79 aaPredicted RBP4.31□□□□□ -1.72
PTPN9-205ENST00000568108 IFITM1P13164 125 aa4.31□□□□□ -1.72
PTPN9-205ENST00000568108 TSPEAR-AS2P59090 65 aa4.31□□□□□ -1.72
PTPN9-205ENST00000568108 SFTA2Q6UW10 78 aa4.31□□□□□ -1.72
PTPN9-205ENST00000568108 SPANXDQ9BXN6 97 aa4.31□□□□□ -1.72
PTPN9-205ENST00000568108 SPANXCQ9NY87 97 aa4.31□□□□□ -1.72
PTPN9-205ENST00000568108 PRO1854Q9UHT4 67 aa4.31□□□□□ -1.72
PTPN9-205ENST00000568108 NDUFA12Q9UI09 145 aa4.31□□□□□ -1.72
PTPN9-205ENST00000568108 ICOSQ9Y6W8 199 aa4.31□□□□□ -1.72
PTPN9-205ENST00000568108 IGHV3-64A0A075B6Q5 118 aa4.3□□□□□ -1.72
PTPN9-205ENST00000568108 NDUFA1O15239 70 aa4.3□□□□□ -1.72
PTPN9-205ENST00000568108 APOMO95445 188 aa4.3□□□□□ -1.72
PTPN9-205ENST00000568108 DNAH10OSP0CZ25 163 aa4.3□□□□□ -1.72
PTPN9-205ENST00000568108 HERV-K104P63124 156 aa4.3□□□□□ -1.72
PTPN9-205ENST00000568108 OCIAD2Q56VL3 154 aa4.3□□□□□ -1.72
PTPN9-205ENST00000568108 LYPD5Q6UWN5 251 aa4.3□□□□□ -1.72
PTPN9-205ENST00000568108 C10orf126Q8N4M7 172 aa4.3□□□□□ -1.72
PTPN9-205ENST00000568108 SRRM2Q9UQ35 2752 aaKnown RBP4.29□□□□□ -1.72
PTPN9-205ENST00000568108 TRBV6-8A0A0A6YYG3 113 aa4.29□□□□□ -1.72
PTPN9-205ENST00000568108 LOC107984156A0A0G2JMH3 177 aa4.29□□□□□ -1.72
PTPN9-205ENST00000568108 COX6CP09669 75 aa4.29□□□□□ -1.72
PTPN9-205ENST00000568108 SPINK8P0C7L1 97 aa4.29□□□□□ -1.72
PTPN9-205ENST00000568108 FHL2Q14192 279 aa4.29□□□□□ -1.72
PTPN9-205ENST00000568108 MRPL23Q16540 153 aaKnown RBP4.29□□□□□ -1.72
PTPN9-205ENST00000568108 MIAQ16674 131 aa4.29□□□□□ -1.72
PTPN9-205ENST00000568108 RNASE13Q5GAN3 156 aaKnown RBP4.29□□□□□ -1.72
PTPN9-205ENST00000568108 ARL17AQ8IVW1 177 aa4.29□□□□□ -1.72
PTPN9-205ENST00000568108 NAA38Q9BRA0 125 aaKnown RBP4.29□□□□□ -1.72
PTPN9-205ENST00000568108 CHCHD5Q9BSY4 110 aa4.29□□□□□ -1.72
PTPN9-205ENST00000568108 PPDPFQ9H3Y8 114 aa4.29□□□□□ -1.72
PTPN9-205ENST00000568108 CDC42SE2Q9NRR3 84 aa4.29□□□□□ -1.72
PTPN9-205ENST00000568108 CDKN2A-AS1Q9UH64 79 aa4.29□□□□□ -1.72
PTPN9-205ENST00000568108 PRO0255Q9UI72 69 aa4.29□□□□□ -1.72
PTPN9-205ENST00000568108 ERG28Q9UKR5 140 aa4.29□□□□□ -1.72
PTPN9-205ENST00000568108 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.29□□□□□ -1.72
PTPN9-205ENST00000568108 TRAV8-3A0A0A6YYJ7 113 aa4.28□□□□□ -1.72
PTPN9-205ENST00000568108 IGLV5-39A0A0G2JS06 123 aa4.28□□□□□ -1.72
PTPN9-205ENST00000568108 A4D1N5 150 aa4.28□□□□□ -1.72
PTPN9-205ENST00000568108 TSPAN13O95857 204 aa4.28□□□□□ -1.72
PTPN9-205ENST00000568108 SCGB1C2P0DMR2 95 aa4.28□□□□□ -1.72
PTPN9-205ENST00000568108 LINC00694P0DN24 101 aa4.28□□□□□ -1.72
PTPN9-205ENST00000568108 PSMB2P49721 201 aa4.28□□□□□ -1.72
PTPN9-205ENST00000568108 HAMPP81172 84 aa4.28□□□□□ -1.72
PTPN9-205ENST00000568108 Q1RN00 199 aa4.28□□□□□ -1.72
PTPN9-205ENST00000568108 LINC00242Q5T6M2 205 aa4.28□□□□□ -1.72
PTPN9-205ENST00000568108 NTM-AS1Q6ZSK4 140 aa4.28□□□□□ -1.72
PTPN9-205ENST00000568108 SH2D6Q7Z4S9 175 aa4.28□□□□□ -1.72
PTPN9-205ENST00000568108 ATP6V0E2Q8NHE4 81 aa4.28□□□□□ -1.72
PTPN9-205ENST00000568108 FAM104AQ969W3 186 aa4.28□□□□□ -1.72
PTPN9-205ENST00000568108 VPS25Q9BRG1 176 aa4.28□□□□□ -1.72
PTPN9-205ENST00000568108 FAT1Q14517 4588 aa4.28□□□□□ -1.72
PTPN9-205ENST00000568108 TRAV13-1A0A0B4J241 112 aa4.27□□□□□ -1.73
PTPN9-205ENST00000568108 PRSS2P07478 247 aa4.27□□□□□ -1.73
PTPN9-205ENST00000568108 CFC1BP0CG36 223 aa4.27□□□□□ -1.73
PTPN9-205ENST00000568108 CFC1P0CG37 223 aa4.27□□□□□ -1.73
PTPN9-205ENST00000568108 CFAP161Q6P656 301 aa4.27□□□□□ -1.73
PTPN9-205ENST00000568108 MUSTN1Q8IVN3 82 aa4.27□□□□□ -1.73
PTPN9-205ENST00000568108 Q9UF83 564 aa4.27□□□□□ -1.73
PTPN9-205ENST00000568108 IGLV5-52A0A0A0MRZ9 124 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms