RNA–Protein interactions for RNA: ENST00000568067.1

TMEM87A-210, Transcript of transmembrane protein 87A, humanhuman

TSL 2

Gene TMEM87A, Length 815 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM87A-210ENST00000568067 ZNF563Q8TA94 476 aa0.85□□□□□ -2.27
TMEM87A-210ENST00000568067 SMCR5Q8TEV8 140 aa0.85□□□□□ -2.27
TMEM87A-210ENST00000568067 LSM10Q969L4 123 aaKnown RBP0.85□□□□□ -2.27
TMEM87A-210ENST00000568067 MUCL1Q96DR8 90 aa0.85□□□□□ -2.27
TMEM87A-210ENST00000568067 ZNF625Q96I27 306 aaPredicted RBP0.85□□□□□ -2.27
TMEM87A-210ENST00000568067 Q96M85 177 aa0.85□□□□□ -2.27
TMEM87A-210ENST00000568067 LINC01600Q96MT4 127 aa0.85□□□□□ -2.27
TMEM87A-210ENST00000568067 SMIM7Q9BQ49 75 aa0.85□□□□□ -2.27
TMEM87A-210ENST00000568067 DYNLRB1Q9NP97 96 aa0.85□□□□□ -2.27
TMEM87A-210ENST00000568067 PRO2289Q9P1D8 64 aa0.85□□□□□ -2.27
TMEM87A-210ENST00000568067 LSM2Q9Y333 95 aaKnown RBP0.85□□□□□ -2.27
TMEM87A-210ENST00000568067 ASCC3Q8N3C0 2202 aaKnown RBP0.85□□□□□ -2.27
TMEM87A-210ENST00000568067 MYO18AQ92614 2054 aaKnown RBP0.85□□□□□ -2.27
TMEM87A-210ENST00000568067 ZNF469Q96JG9 3925 aaPredicted RBP0.85□□□□□ -2.27
TMEM87A-210ENST00000568067 ATAD5Q96QE3 1844 aa0.85□□□□□ -2.27
TMEM87A-210ENST00000568067 AKAP6Q13023 2319 aa0.84□□□□□ -2.27
TMEM87A-210ENST00000568067 MICAL3Q7RTP6 2002 aa0.84□□□□□ -2.27
TMEM87A-210ENST00000568067 GOLGA4Q13439 2230 aaKnown RBP0.84□□□□□ -2.27
TMEM87A-210ENST00000568067 DSCAML1Q8TD84 2053 aa0.84□□□□□ -2.27
TMEM87A-210ENST00000568067 LCTP09848 1927 aa0.84□□□□□ -2.27
TMEM87A-210ENST00000568067 MYLKQ15746 1914 aa0.84□□□□□ -2.27
TMEM87A-210ENST00000568067 TRAV14DV4A0A0A6YYC5 116 aa0.84□□□□□ -2.27
TMEM87A-210ENST00000568067 TRAV3A0A0B4J244 114 aa0.84□□□□□ -2.27
TMEM87A-210ENST00000568067 TRAV17A0A0B4J275 112 aa0.84□□□□□ -2.27
TMEM87A-210ENST00000568067 TCRBV4S1A1TA0A5B7 111 aa0.84□□□□□ -2.27
TMEM87A-210ENST00000568067 RBAKDNA6NC62 111 aa0.84□□□□□ -2.27
TMEM87A-210ENST00000568067 CCL16O15467 120 aa0.84□□□□□ -2.27
TMEM87A-210ENST00000568067 ADCYAP1P18509 176 aa0.84□□□□□ -2.27
TMEM87A-210ENST00000568067 RNASE4P34096 147 aaKnown RBP0.84□□□□□ -2.27
TMEM87A-210ENST00000568067 UBE2G1P62253 170 aa0.84□□□□□ -2.27
TMEM87A-210ENST00000568067 WFDC2Q14508 124 aa0.84□□□□□ -2.27
TMEM87A-210ENST00000568067 MIAQ16674 131 aa0.84□□□□□ -2.27
TMEM87A-210ENST00000568067 TMEM170BQ5T4T1 132 aa0.84□□□□□ -2.27
TMEM87A-210ENST00000568067 XAF1Q6GPH4 301 aa0.84□□□□□ -2.27
TMEM87A-210ENST00000568067 SLC48A1Q6P1K1 146 aa0.84□□□□□ -2.27
TMEM87A-210ENST00000568067 LINC00643Q86TS7 51 aa0.84□□□□□ -2.27
TMEM87A-210ENST00000568067 LINC00471Q8N535 108 aa0.84□□□□□ -2.27
TMEM87A-210ENST00000568067 CCL4L1Q8NHW4 92 aa0.84□□□□□ -2.27
TMEM87A-210ENST00000568067 FAM213BQ8TBF2 198 aa0.84□□□□□ -2.27
TMEM87A-210ENST00000568067 WFDC5Q8TCV5 224 aa0.84□□□□□ -2.27
TMEM87A-210ENST00000568067 CHCHD1Q96BP2 118 aaKnown RBP0.84□□□□□ -2.27
TMEM87A-210ENST00000568067 TMEM141Q96I45 108 aa0.84□□□□□ -2.27
TMEM87A-210ENST00000568067 C20orf78Q9BR46 151 aa0.84□□□□□ -2.27
TMEM87A-210ENST00000568067 SLC50A1Q9BRV3 221 aa0.84□□□□□ -2.27
TMEM87A-210ENST00000568067 KRTAP2-1Q9BYU5 128 aa0.84□□□□□ -2.27
TMEM87A-210ENST00000568067 CYP4F30PQ9H0H9 118 aa0.84□□□□□ -2.27
TMEM87A-210ENST00000568067 NXT2Q9NPJ8 142 aaKnown RBP0.84□□□□□ -2.27
TMEM87A-210ENST00000568067 MRPL35Q9NZE8 188 aaKnown RBP0.84□□□□□ -2.27
TMEM87A-210ENST00000568067 PTPRBP23467 1997 aa0.84□□□□□ -2.28
TMEM87A-210ENST00000568067 TANC2Q9HCD6 1990 aa0.84□□□□□ -2.28
TMEM87A-210ENST00000568067 TRPM6Q9BX84 2022 aa0.84□□□□□ -2.28
TMEM87A-210ENST00000568067 MDC1Q14676 2089 aaKnown RBP0.84□□□□□ -2.28
TMEM87A-210ENST00000568067 MYH8P13535 1937 aa0.83□□□□□ -2.28
TMEM87A-210ENST00000568067 ECM29Q5VYK3 1845 aa0.83□□□□□ -2.28
TMEM87A-210ENST00000568067 HECTD4Q9Y4D8 3996 aa0.83□□□□□ -2.28
TMEM87A-210ENST00000568067 SACSQ9NZJ4 4579 aa0.83□□□□□ -2.28
TMEM87A-210ENST00000568067 IGKV1D-43A0A0B4J1Z2 117 aa0.83□□□□□ -2.28
TMEM87A-210ENST00000568067 TRAV13-2A0A0B4J235 113 aa0.83□□□□□ -2.28
TMEM87A-210ENST00000568067 TRAV1-1A0A0B4J248 108 aa0.83□□□□□ -2.28
TMEM87A-210ENST00000568067 IGKV1-9A0A0C4DH69 117 aa0.83□□□□□ -2.28
TMEM87A-210ENST00000568067 LCE6AA0A183 80 aa0.83□□□□□ -2.28
TMEM87A-210ENST00000568067 hADV29S1A0JD25 119 aa0.83□□□□□ -2.28
TMEM87A-210ENST00000568067 CRYM-AS1A6NIL9 109 aa0.83□□□□□ -2.28
TMEM87A-210ENST00000568067 IBA57-AS1B1ANH7 110 aa0.83□□□□□ -2.28
TMEM87A-210ENST00000568067 F2Z2F3 143 aa0.83□□□□□ -2.28
TMEM87A-210ENST00000568067 M0R129 80 aa0.83□□□□□ -2.28
TMEM87A-210ENST00000568067 CCKP06307 115 aa0.83□□□□□ -2.28
TMEM87A-210ENST00000568067 MSMBP08118 114 aa0.83□□□□□ -2.28
TMEM87A-210ENST00000568067 COX6CP09669 75 aa0.83□□□□□ -2.28
TMEM87A-210ENST00000568067 PIRTP0C851 137 aa0.83□□□□□ -2.28
TMEM87A-210ENST00000568067 COX8AP10176 69 aa0.83□□□□□ -2.28
TMEM87A-210ENST00000568067 DYNLT1P63172 113 aa0.83□□□□□ -2.28
TMEM87A-210ENST00000568067 RBM3P98179 157 aaKnown RBP0.83□□□□□ -2.28
TMEM87A-210ENST00000568067 INSL4Q14641 139 aa0.83□□□□□ -2.28
TMEM87A-210ENST00000568067 SPANXN5Q5MJ07 72 aa0.83□□□□□ -2.28
TMEM87A-210ENST00000568067 LELP1Q5T871 98 aa0.83□□□□□ -2.28
TMEM87A-210ENST00000568067 PATE2Q6UY27 113 aa0.83□□□□□ -2.28
TMEM87A-210ENST00000568067 C6orf201Q7Z4U5 140 aa0.83□□□□□ -2.28
TMEM87A-210ENST00000568067 BAGE3Q86Y29 109 aa0.83□□□□□ -2.28
TMEM87A-210ENST00000568067 BAGE2Q86Y30 109 aa0.83□□□□□ -2.28
TMEM87A-210ENST00000568067 NDUFA11Q86Y39 141 aa0.83□□□□□ -2.28
TMEM87A-210ENST00000568067 DYNAPQ8N1N2 210 aa0.83□□□□□ -2.28
TMEM87A-210ENST00000568067 Q8N2B8 174 aa0.83□□□□□ -2.28
TMEM87A-210ENST00000568067 TOMM5Q8N4H5 51 aa0.83□□□□□ -2.28
TMEM87A-210ENST00000568067 PFN4Q8NHR9 129 aa0.83□□□□□ -2.28
TMEM87A-210ENST00000568067 CLEC2BQ92478 149 aa0.83□□□□□ -2.28
TMEM87A-210ENST00000568067 AQP3Q92482 292 aa0.83□□□□□ -2.28
TMEM87A-210ENST00000568067 DSCR8Q96T75 97 aa0.83□□□□□ -2.28
TMEM87A-210ENST00000568067 SMR3AQ99954 134 aa0.83□□□□□ -2.28
TMEM87A-210ENST00000568067 TTTY13Q9BZ97 58 aa0.83□□□□□ -2.28
TMEM87A-210ENST00000568067 CST11Q9H112 138 aa0.83□□□□□ -2.28
TMEM87A-210ENST00000568067 C14orf132Q9NPU4 83 aa0.83□□□□□ -2.28
TMEM87A-210ENST00000568067 HIGD1BQ9P298 99 aa0.83□□□□□ -2.28
TMEM87A-210ENST00000568067 TP73-AS1Q9UF72 201 aa0.83□□□□□ -2.28
TMEM87A-210ENST00000568067 OBSL1O75147 1896 aa0.83□□□□□ -2.28
TMEM87A-210ENST00000568067 ANK1P16157 1881 aa0.83□□□□□ -2.28
TMEM87A-210ENST00000568067 SNRNP200O75643 2136 aaKnown RBP0.83□□□□□ -2.28
TMEM87A-210ENST00000568067 NUMA1Q14980 2115 aa0.83□□□□□ -2.28
TMEM87A-210ENST00000568067 ZFC3H1O60293 1989 aaKnown RBP0.83□□□□□ -2.28
TMEM87A-210ENST00000568067 TRRAPQ9Y4A5 3859 aa0.83□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms