RNA–Protein interactions for RNA: ENST00000568067.1

TMEM87A-210, Transcript of transmembrane protein 87A, humanhuman

TSL 2

Gene TMEM87A, Length 815 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM87A-210ENST00000568067 AEBP2Q6ZN18 517 aaPredicted RBP24.19■■□□□ 1.46
TMEM87A-210ENST00000568067 CHIC1Q5VXU3 224 aa22.5■■□□□ 1.19
TMEM87A-210ENST00000568067 SENP3Q9H4L4 574 aaPredicted RBP20.73■□□□□ 0.91
TMEM87A-210ENST00000568067 PHF23Q9BUL5 403 aaPredicted RBP20.35■□□□□ 0.85
TMEM87A-210ENST00000568067 POTEDQ86YR6 584 aa20.14■□□□□ 0.81
TMEM87A-210ENST00000568067 FOXD1Q16676 465 aa19.52■□□□□ 0.72
TMEM87A-210ENST00000568067 MSH5O43196 834 aa18.62■□□□□ 0.57
TMEM87A-210ENST00000568067 PIAS4Q8N2W9 510 aaPredicted RBP17.93■□□□□ 0.46
TMEM87A-210ENST00000568067 PPP6R1Q9UPN7 881 aa17.43■□□□□ 0.38
TMEM87A-210ENST00000568067 ADRA2BP18089 450 aa17.29■□□□□ 0.36
TMEM87A-210ENST00000568067 PLPPR3Q6T4P5 718 aa16.92■□□□□ 0.3
TMEM87A-210ENST00000568067 CACNB1Q02641 598 aaPredicted RBP16.69■□□□□ 0.26
TMEM87A-210ENST00000568067 DMRT2Q9Y5R5 561 aa16.29■□□□□ 0.2
TMEM87A-210ENST00000568067 MAPK8IP2Q13387 824 aaPredicted RBP16.24■□□□□ 0.19
TMEM87A-210ENST00000568067 RNF39Q9H2S5 420 aa15.82■□□□□ 0.12
TMEM87A-210ENST00000568067 SCAF1Q9H7N4 1312 aaKnown RBP15.72■□□□□ 0.11
TMEM87A-210ENST00000568067 DCAF8L1A6NGE4 600 aa15.68■□□□□ 0.1
TMEM87A-210ENST00000568067 POTEHQ6S545 545 aa15.54■□□□□ 0.08
TMEM87A-210ENST00000568067 C1QBPQ07021 282 aaKnown RBP15.5■□□□□ 0.07
TMEM87A-210ENST00000568067 HOXD11P31277 338 aaPredicted RBP15.25■□□□□ 0.03
TMEM87A-210ENST00000568067 DNAJC5BQ9UF47 199 aa14.89□□□□□ -0.03
TMEM87A-210ENST00000568067 RNF216Q9NWF9 866 aaPredicted RBP14.83□□□□□ -0.04
TMEM87A-210ENST00000568067 PPP4R3CPQ6ZMV5 832 aa14.72□□□□□ -0.05
TMEM87A-210ENST00000568067 CNKSR2Q8WXI2 1034 aa14.67□□□□□ -0.06
TMEM87A-210ENST00000568067 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.51□□□□□ -0.095e-6■■■■□ 19.5
TMEM87A-210ENST00000568067 DSG3P32926 999 aa14.45□□□□□ -0.1
TMEM87A-210ENST00000568067 SPINK5Q9NQ38 1064 aaPredicted RBP14.27□□□□□ -0.13
TMEM87A-210ENST00000568067 CAPN15O75808 1086 aa14.26□□□□□ -0.13
TMEM87A-210ENST00000568067 U3KPZ7 1027 aaPredicted RBP14.12□□□□□ -0.15
TMEM87A-210ENST00000568067 NCBP3Q53F19 620 aaKnown RBP14.1□□□□□ -0.15
TMEM87A-210ENST00000568067 SP7Q8TDD2 431 aaPredicted RBP14.03□□□□□ -0.16
TMEM87A-210ENST00000568067 KCNA4P22459 653 aa13.99□□□□□ -0.17
TMEM87A-210ENST00000568067 CHRDL2Q6WN34 429 aa13.94□□□□□ -0.18
TMEM87A-210ENST00000568067 NPM3O75607 178 aaKnown RBP13.87□□□□□ -0.19
TMEM87A-210ENST00000568067 ABCB7O75027 752 aa13.86□□□□□ -0.19
TMEM87A-210ENST00000568067 TRHP20396 242 aaPredicted RBP13.77□□□□□ -0.21
TMEM87A-210ENST00000568067 RBM42Q9BTD8 480 aaKnown RBP13.75□□□□□ -0.21
TMEM87A-210ENST00000568067 ZNF219Q9P2Y4 722 aaPredicted RBP13.65□□□□□ -0.22
TMEM87A-210ENST00000568067 APLP2Q06481 763 aa13.5□□□□□ -0.25
TMEM87A-210ENST00000568067 HAX1O00165 279 aa13.44□□□□□ -0.26
TMEM87A-210ENST00000568067 PIP4P2Q8N4L2 257 aa13.39□□□□□ -0.27
TMEM87A-210ENST00000568067 SLC4A2P04920 1241 aa13.33□□□□□ -0.28
TMEM87A-210ENST00000568067 SLC4A1APQ9BWU0 796 aaKnown RBP13.29□□□□□ -0.28
TMEM87A-210ENST00000568067 PLSCR2Q9NRY7 297 aa13.27□□□□□ -0.29
TMEM87A-210ENST00000568067 EVX2Q03828 476 aa13.26□□□□□ -0.29
TMEM87A-210ENST00000568067 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.24□□□□□ -0.29
TMEM87A-210ENST00000568067 HNRNPUL2Q1KMD3 747 aaKnown RBP13.24□□□□□ -0.29
TMEM87A-210ENST00000568067 AKT1S1Q96B36 256 aa13.22□□□□□ -0.29
TMEM87A-210ENST00000568067 POLA2Q14181 598 aa13.16□□□□□ -0.3
TMEM87A-210ENST00000568067 LHX8Q68G74 356 aa13.16□□□□□ -0.3
TMEM87A-210ENST00000568067 REM2Q8IYK8 340 aaPredicted RBP13.14□□□□□ -0.31
TMEM87A-210ENST00000568067 SAMD1Q6SPF0 538 aaPredicted RBP13.13□□□□□ -0.31
TMEM87A-210ENST00000568067 FXR2P51116 673 aaKnown RBP eCLIP13.12□□□□□ -0.31
TMEM87A-210ENST00000568067 PITPNM1O00562 1244 aa13.03□□□□□ -0.32
TMEM87A-210ENST00000568067 FOXD4L1Q9NU39 408 aa12.93□□□□□ -0.34
TMEM87A-210ENST00000568067 ZBTB22O15209 634 aa12.86□□□□□ -0.35
TMEM87A-210ENST00000568067 GABBR2O75899 941 aa12.84□□□□□ -0.35
TMEM87A-210ENST00000568067 MYCNP04198 464 aaPredicted RBP12.83□□□□□ -0.36
TMEM87A-210ENST00000568067 OSCARQ8IYS5 282 aa12.78□□□□□ -0.36
TMEM87A-210ENST00000568067 C19orf67A6NJJ6 358 aa12.75□□□□□ -0.37
TMEM87A-210ENST00000568067 CSRNP3Q8WYN3 585 aa12.71□□□□□ -0.37
TMEM87A-210ENST00000568067 ZBTB12Q9Y330 459 aaPredicted RBP12.71□□□□□ -0.37
TMEM87A-210ENST00000568067 EHMT2Q96KQ7 1210 aa12.7□□□□□ -0.38
TMEM87A-210ENST00000568067 PRKAR2AP13861 404 aaKnown RBP12.66□□□□□ -0.38
TMEM87A-210ENST00000568067 POTEIP0CG38 1075 aa12.6□□□□□ -0.39
TMEM87A-210ENST00000568067 ATXN8OSP0DMR3 200 aa12.55□□□□□ -0.4
TMEM87A-210ENST00000568067 ATF5Q9Y2D1 282 aaPredicted RBP12.48□□□□□ -0.41
TMEM87A-210ENST00000568067 POTEMA6NI47 508 aa12.45□□□□□ -0.42
TMEM87A-210ENST00000568067 CLEC11AQ9Y240 323 aa12.4□□□□□ -0.42
TMEM87A-210ENST00000568067 POTEGQ6S5H5 508 aa12.37□□□□□ -0.43
TMEM87A-210ENST00000568067 OTUD5Q96G74 571 aa12.33□□□□□ -0.44
TMEM87A-210ENST00000568067 CHADLQ6NUI6 762 aa12.32□□□□□ -0.44
TMEM87A-210ENST00000568067 SPDYE1Q8NFV5 336 aaPredicted RBP12.32□□□□□ -0.44
TMEM87A-210ENST00000568067 SPDYE2BA6NHP3 402 aa12.26□□□□□ -0.45
TMEM87A-210ENST00000568067 SPDYE6P0CI01 402 aa12.26□□□□□ -0.45
TMEM87A-210ENST00000568067 SPDYE2Q495Y8 402 aa12.26□□□□□ -0.45
TMEM87A-210ENST00000568067 PCDH10Q9P2E7 1040 aa12.24□□□□□ -0.45
TMEM87A-210ENST00000568067 DCBLD2Q96PD2 775 aa12.23□□□□□ -0.45
TMEM87A-210ENST00000568067 CD44P16070 742 aaKnown RBP12.18□□□□□ -0.46
TMEM87A-210ENST00000568067 POTEB2H3BUK9 544 aa12.17□□□□□ -0.46
TMEM87A-210ENST00000568067 CLCN6P51797 869 aa12.16□□□□□ -0.46
TMEM87A-210ENST00000568067 PRR29P0C7W0 189 aa12.01□□□□□ -0.49
TMEM87A-210ENST00000568067 SSUH2Q9Y2M2 353 aa12□□□□□ -0.49
TMEM87A-210ENST00000568067 FARP1Q9Y4F1 1045 aaPredicted RBP11.98□□□□□ -0.49
TMEM87A-210ENST00000568067 FBLN2P98095 1184 aa11.97□□□□□ -0.49
TMEM87A-210ENST00000568067 ZNF692Q9BU19 519 aaPredicted RBP11.97□□□□□ -0.49
TMEM87A-210ENST00000568067 LCE2DQ5TA82 110 aaPredicted RBP11.95□□□□□ -0.5
TMEM87A-210ENST00000568067 ZNF579Q8NAF0 562 aaKnown RBP11.94□□□□□ -0.5
TMEM87A-210ENST00000568067 MKRN4PQ13434 485 aaPredicted RBP11.93□□□□□ -0.5
TMEM87A-210ENST00000568067 GALR2O43603 387 aaPredicted RBP11.91□□□□□ -0.5
TMEM87A-210ENST00000568067 ZRANB1Q9UGI0 708 aa11.85□□□□□ -0.51
TMEM87A-210ENST00000568067 FAM163AQ96GL9 167 aaPredicted RBP11.84□□□□□ -0.51
TMEM87A-210ENST00000568067 POTEJP0CG39 1038 aa11.81□□□□□ -0.52
TMEM87A-210ENST00000568067 PELP1Q8IZL8 1130 aaKnown RBP11.81□□□□□ -0.52
TMEM87A-210ENST00000568067 PABPN1Q86U42 306 aaKnown RBP eCLIP11.77□□□□□ -0.53
TMEM87A-210ENST00000568067 CDAN1Q8IWY9 1227 aa11.7□□□□□ -0.54
TMEM87A-210ENST00000568067 MAMSTRQ6ZN01 415 aa11.68□□□□□ -0.54
TMEM87A-210ENST00000568067 METRNQ9UJH8 293 aa11.68□□□□□ -0.54
TMEM87A-210ENST00000568067 PHF12Q96QT6 1004 aa11.61□□□□□ -0.55
TMEM87A-210ENST00000568067 SPDYE4A6NLX3 237 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms