RNA–Protein interactions for RNA: ENST00000567698.1

SHCBP1-206, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 2

Gene SHCBP1, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-206ENST00000567698 PPP1R1CQ8WVI7 109 aa1.09□□□□□ -2.23
SHCBP1-206ENST00000567698 BTAF1O14981 1849 aa1.09□□□□□ -2.23
SHCBP1-206ENST00000567698 WIZO95785 1651 aa1.09□□□□□ -2.24
SHCBP1-206ENST00000567698 CLTCQ00610 1675 aaKnown RBP1.09□□□□□ -2.24
SHCBP1-206ENST00000567698 CPS1P31327 1500 aa1.09□□□□□ -2.24
SHCBP1-206ENST00000567698 SSC5DA1L4H1 1573 aa1.08□□□□□ -2.24
SHCBP1-206ENST00000567698 KIF20BQ96Q89 1820 aa1.08□□□□□ -2.24
SHCBP1-206ENST00000567698 NESP48681 1621 aa1.08□□□□□ -2.24
SHCBP1-206ENST00000567698 USP32Q8NFA0 1604 aa1.08□□□□□ -2.24
SHCBP1-206ENST00000567698 RAPGEF6Q8TEU7 1601 aa1.08□□□□□ -2.24
SHCBP1-206ENST00000567698 EIF2AK4Q9P2K8 1649 aaKnown RBP1.08□□□□□ -2.24
SHCBP1-206ENST00000567698 TRAV1-2A0A0B4J238 106 aa1.08□□□□□ -2.24
SHCBP1-206ENST00000567698 LOC285095A0A1B0GVY8 99 aa1.08□□□□□ -2.24
SHCBP1-206ENST00000567698 TMEM14DPA8MWL7 114 aa1.08□□□□□ -2.24
SHCBP1-206ENST00000567698 ZNF137PP52743 207 aa1.08□□□□□ -2.24
SHCBP1-206ENST00000567698 DEFB121Q5J5C9 76 aa1.08□□□□□ -2.24
SHCBP1-206ENST00000567698 C6orf201Q7Z4U5 140 aa1.08□□□□□ -2.24
SHCBP1-206ENST00000567698 FAM223AQ8IWN6 122 aa1.08□□□□□ -2.24
SHCBP1-206ENST00000567698 TOMM5Q8N4H5 51 aa1.08□□□□□ -2.24
SHCBP1-206ENST00000567698 NXT2Q9NPJ8 142 aaKnown RBP1.08□□□□□ -2.24
SHCBP1-206ENST00000567698 AGLP35573 1532 aa1.08□□□□□ -2.24
SHCBP1-206ENST00000567698 ASXL1Q8IXJ9 1541 aa1.08□□□□□ -2.24
SHCBP1-206ENST00000567698 KIAA0556O60303 1618 aa1.07□□□□□ -2.24
SHCBP1-206ENST00000567698 CICQ96RK0 1608 aaPredicted RBP1.07□□□□□ -2.24
SHCBP1-206ENST00000567698 PDCD11Q14690 1871 aaKnown RBP1.07□□□□□ -2.24
SHCBP1-206ENST00000567698 SCN11AQ9UI33 1791 aa1.07□□□□□ -2.24
SHCBP1-206ENST00000567698 SLIT1O75093 1534 aa1.07□□□□□ -2.24
SHCBP1-206ENST00000567698 FXYD6-FXYD2A0A087WZ82 144 aa1.07□□□□□ -2.24
SHCBP1-206ENST00000567698 HMGN2P05204 90 aaKnown RBP1.07□□□□□ -2.24
SHCBP1-206ENST00000567698 NMSQ5H8A3 153 aa1.07□□□□□ -2.24
SHCBP1-206ENST00000567698 SMIM4Q8WVI0 70 aa1.07□□□□□ -2.24
SHCBP1-206ENST00000567698 NMES1Q9C002 83 aa1.07□□□□□ -2.24
SHCBP1-206ENST00000567698 FXYD6Q9H0Q3 95 aa1.07□□□□□ -2.24
SHCBP1-206ENST00000567698 ABRACLQ9P1F3 81 aa1.07□□□□□ -2.24
SHCBP1-206ENST00000567698 LINC01558Q9Y6Z2 57 aa1.07□□□□□ -2.24
SHCBP1-206ENST00000567698 R4GMQ9 66 aa1.07□□□□□ -2.24
SHCBP1-206ENST00000567698 ARL2-SNX15V9GYD0 113 aa1.07□□□□□ -2.24
SHCBP1-206ENST00000567698 GLI2P10070 1586 aa1.07□□□□□ -2.24
SHCBP1-206ENST00000567698 MROH2AA6NES4 1674 aa1.07□□□□□ -2.24
SHCBP1-206ENST00000567698 CDC42BPAQ5VT25 1732 aa1.06□□□□□ -2.24
SHCBP1-206ENST00000567698 LRRIQ1Q96JM4 1722 aa1.06□□□□□ -2.24
SHCBP1-206ENST00000567698 TRBV25-1A0A075B6N4 114 aa1.06□□□□□ -2.24
SHCBP1-206ENST00000567698 GVQW2A0A096LPI5 108 aaPredicted RBP1.06□□□□□ -2.24
SHCBP1-206ENST00000567698 A0A1B0GWA3 101 aa1.06□□□□□ -2.24
SHCBP1-206ENST00000567698 F8VRH5 84 aa1.06□□□□□ -2.24
SHCBP1-206ENST00000567698 NDUFB1O75438 58 aa1.06□□□□□ -2.24
SHCBP1-206ENST00000567698 SAA2P0DJI9 122 aaPredicted RBP1.06□□□□□ -2.24
SHCBP1-206ENST00000567698 ACYP2P14621 99 aa1.06□□□□□ -2.24
SHCBP1-206ENST00000567698 RPL37P61927 97 aaKnown RBP1.06□□□□□ -2.24
SHCBP1-206ENST00000567698 PLGLAQ15195 96 aa1.06□□□□□ -2.24
SHCBP1-206ENST00000567698 BAGE3Q86Y29 109 aa1.06□□□□□ -2.24
SHCBP1-206ENST00000567698 BAGE2Q86Y30 109 aa1.06□□□□□ -2.24
SHCBP1-206ENST00000567698 DEFB107AQ8IZN7 70 aa1.06□□□□□ -2.24
SHCBP1-206ENST00000567698 KNDC1Q76NI1 1749 aa1.06□□□□□ -2.24
SHCBP1-206ENST00000567698 MYO7BQ6PIF6 2116 aa1.06□□□□□ -2.24
SHCBP1-206ENST00000567698 ABCA1O95477 2261 aa1.05□□□□□ -2.24
SHCBP1-206ENST00000567698 CLTCL1P53675 1640 aa1.05□□□□□ -2.24
SHCBP1-206ENST00000567698 ALKQ9UM73 1620 aa1.05□□□□□ -2.24
SHCBP1-206ENST00000567698 PREX1Q8TCU6 1659 aa1.05□□□□□ -2.24
SHCBP1-206ENST00000567698 MYMXA0A1B0GTQ4 84 aa1.05□□□□□ -2.24
SHCBP1-206ENST00000567698 LINC01549A6NIU2 74 aa1.05□□□□□ -2.24
SHCBP1-206ENST00000567698 FAM223BA6NKX1 122 aa1.05□□□□□ -2.24
SHCBP1-206ENST00000567698 CEBPZOSA8MTT3 80 aa1.05□□□□□ -2.24
SHCBP1-206ENST00000567698 K7EIL1 84 aa1.05□□□□□ -2.24
SHCBP1-206ENST00000567698 C3orf79P0CE67 100 aa1.05□□□□□ -2.24
SHCBP1-206ENST00000567698 GCHFRP30047 84 aa1.05□□□□□ -2.24
SHCBP1-206ENST00000567698 IFI27P40305 119 aaPredicted RBP1.05□□□□□ -2.24
SHCBP1-206ENST00000567698 SERF2P84101 59 aa1.05□□□□□ -2.24
SHCBP1-206ENST00000567698 WFDC2Q14508 124 aa1.05□□□□□ -2.24
SHCBP1-206ENST00000567698 ATXN8Q156A1 80 aa1.05□□□□□ -2.24
SHCBP1-206ENST00000567698 Q6JHZ5 121 aa1.05□□□□□ -2.24
SHCBP1-206ENST00000567698 LINC00472Q9H8W2 130 aa1.05□□□□□ -2.24
SHCBP1-206ENST00000567698 CMC2Q9NRP2 79 aa1.05□□□□□ -2.24
SHCBP1-206ENST00000567698 LTN1O94822 1766 aa1.05□□□□□ -2.24
SHCBP1-206ENST00000567698 ASCC3Q8N3C0 2202 aaKnown RBP1.05□□□□□ -2.24
SHCBP1-206ENST00000567698 LAMA4Q16363 1823 aa1.05□□□□□ -2.24
SHCBP1-206ENST00000567698 NEXMIFQ5QGS0 1516 aa1.05□□□□□ -2.24
SHCBP1-206ENST00000567698 SAMD9LQ8IVG5 1584 aa1.04□□□□□ -2.24
SHCBP1-206ENST00000567698 PPRC1Q5VV67 1664 aaKnown RBP1.04□□□□□ -2.24
SHCBP1-206ENST00000567698 A0A1B0GUL6 1792 aa1.04□□□□□ -2.24
SHCBP1-206ENST00000567698 CTXND1A0A1B0GTU2 59 aa1.04□□□□□ -2.24
SHCBP1-206ENST00000567698 G3V318 75 aa1.04□□□□□ -2.24
SHCBP1-206ENST00000567698 C10orf113Q5VZT2 155 aa1.04□□□□□ -2.24
SHCBP1-206ENST00000567698 CD163L1Q9NR16 1453 aa1.04□□□□□ -2.24
SHCBP1-206ENST00000567698 NHSQ6T4R5 1651 aa1.04□□□□□ -2.24
SHCBP1-206ENST00000567698 ALS2Q96Q42 1657 aa1.04□□□□□ -2.24
SHCBP1-206ENST00000567698 FAM208AQ9UK61 1670 aaKnown RBP1.04□□□□□ -2.24
SHCBP1-206ENST00000567698 RGPD1P0DJD0 1748 aa1.03□□□□□ -2.24
SHCBP1-206ENST00000567698 ITSN1Q15811 1721 aa1.03□□□□□ -2.24
SHCBP1-206ENST00000567698 MYH4Q9Y623 1939 aa1.03□□□□□ -2.24
SHCBP1-206ENST00000567698 ZNF815PA8K554 130 aa1.03□□□□□ -2.24
SHCBP1-206ENST00000567698 M0R3E3 92 aa1.03□□□□□ -2.24
SHCBP1-206ENST00000567698 UQCR11O14957 56 aa1.03□□□□□ -2.24
SHCBP1-206ENST00000567698 LEPROTL1O95214 131 aa1.03□□□□□ -2.24
SHCBP1-206ENST00000567698 PRH1P02810 166 aa1.03□□□□□ -2.24
SHCBP1-206ENST00000567698 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.03□□□□□ -2.24
SHCBP1-206ENST00000567698 Q6ZRX8 168 aa1.03□□□□□ -2.24
SHCBP1-206ENST00000567698 SPRR4Q96PI1 79 aa1.03□□□□□ -2.24
SHCBP1-206ENST00000567698 GNG13Q9P2W3 67 aa1.03□□□□□ -2.24
SHCBP1-206ENST00000567698 ABCC8Q09428 1581 aa1.03□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms