RNA–Protein interactions for RNA: ENST00000567289.5

SIN3A-208, Transcript of SIN3 transcription regulator family member A, humanhuman

TSL 2 BASIC

Gene SIN3A, Length 4,078 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-208ENST00000567289 LINC00337Q8N6G1 96 aa8.43□□□□□ -1.06
SIN3A-208ENST00000567289 DIRC1Q969H9 104 aa8.43□□□□□ -1.06
SIN3A-208ENST00000567289 C3orf84H3BNL1 204 aa8.43□□□□□ -1.06
SIN3A-208ENST00000567289 REG3AQ06141 175 aa8.43□□□□□ -1.06
SIN3A-208ENST00000567289 LINC00482Q8N8I6 264 aa8.43□□□□□ -1.06
SIN3A-208ENST00000567289 C4orf3Q8WVX3 66 aa8.43□□□□□ -1.06
SIN3A-208ENST00000567289 PRO0255Q9UI72 69 aa8.43□□□□□ -1.06
SIN3A-208ENST00000567289 NHLRC4P0CG21 123 aaPredicted RBP8.42□□□□□ -1.06
SIN3A-208ENST00000567289 FAM222AQ5U5X8 452 aa8.42□□□□□ -1.06
SIN3A-208ENST00000567289 FAM218AQ96MZ4 157 aa8.42□□□□□ -1.06
SIN3A-208ENST00000567289 BBC3Q96PG8 261 aaPredicted RBP8.42□□□□□ -1.06
SIN3A-208ENST00000567289 LRCOL1A6NCL2 159 aa8.41□□□□□ -1.06
SIN3A-208ENST00000567289 UBE2BP63146 152 aa8.41□□□□□ -1.06
SIN3A-208ENST00000567289 ZNF292O60281 2723 aa8.41□□□□□ -1.06
SIN3A-208ENST00000567289 SOSTDC1Q6X4U4 206 aa8.41□□□□□ -1.06
SIN3A-208ENST00000567289 KIR2DL5BQ8NHK3 375 aa8.41□□□□□ -1.06
SIN3A-208ENST00000567289 LINC00959A0A1B0GUT2 108 aa8.4□□□□□ -1.06
SIN3A-208ENST00000567289 ODF3L2Q3SX64 289 aa8.4□□□□□ -1.06
SIN3A-208ENST00000567289 DEFB121Q5J5C9 76 aa8.4□□□□□ -1.07
SIN3A-208ENST00000567289 SBSPONQ8IVN8 264 aa8.39□□□□□ -1.07
SIN3A-208ENST00000567289 ZNF702PQ9H963 129 aa8.39□□□□□ -1.07
SIN3A-208ENST00000567289 FUSP35637 526 aaKnown RBP eCLIP8.39□□□□□ -1.07
SIN3A-208ENST00000567289 NBEAL2Q6ZNJ1 2754 aa8.39□□□□□ -1.07
SIN3A-208ENST00000567289 SMG1Q96Q15 3661 aaKnown RBP8.39□□□□□ -1.07
SIN3A-208ENST00000567289 DEFB113Q30KQ7 82 aa8.39□□□□□ -1.07
SIN3A-208ENST00000567289 RPL28P46779 137 aaKnown RBP8.38□□□□□ -1.07
SIN3A-208ENST00000567289 Q6YL49 198 aa8.38□□□□□ -1.07
SIN3A-208ENST00000567289 CSDC2Q9Y534 153 aaKnown RBP8.38□□□□□ -1.07
SIN3A-208ENST00000567289 HECTD1Q9ULT8 2610 aa8.38□□□□□ -1.07
SIN3A-208ENST00000567289 DNAJC9-AS1A6NH13 148 aa8.38□□□□□ -1.07
SIN3A-208ENST00000567289 BPY2O14599 106 aa8.38□□□□□ -1.07
SIN3A-208ENST00000567289 MGAM2Q2M2H8 2515 aa8.38□□□□□ -1.07
SIN3A-208ENST00000567289 LAMA5O15230 3695 aa8.38□□□□□ -1.07
SIN3A-208ENST00000567289 COX7BP24311 80 aa8.38□□□□□ -1.07
SIN3A-208ENST00000567289 DMXL1Q9Y485 3027 aa8.37□□□□□ -1.07
SIN3A-208ENST00000567289 ETDCA0A1B0GVM5 59 aa8.37□□□□□ -1.07
SIN3A-208ENST00000567289 PSCAO43653 123 aa8.37□□□□□ -1.07
SIN3A-208ENST00000567289 CCKP06307 115 aa8.37□□□□□ -1.07
SIN3A-208ENST00000567289 C1orf158Q8N1D5 194 aa8.37□□□□□ -1.07
SIN3A-208ENST00000567289 TRBV7-7A0A0K0K1E9 115 aa8.37□□□□□ -1.07
SIN3A-208ENST00000567289 COL12A1Q99715 3063 aa8.37□□□□□ -1.07
SIN3A-208ENST00000567289 TNRC18O15417 2968 aaPredicted RBP8.36□□□□□ -1.07
SIN3A-208ENST00000567289 Q6JHZ5 121 aa8.36□□□□□ -1.07
SIN3A-208ENST00000567289 GCN1Q92616 2671 aaKnown RBP8.36□□□□□ -1.07
SIN3A-208ENST00000567289 COL27A1Q8IZC6 1860 aaPredicted RBP8.36□□□□□ -1.07
SIN3A-208ENST00000567289 TRBV6-4A0A1B0GX49 114 aa8.36□□□□□ -1.07
SIN3A-208ENST00000567289 APOC4P55056 127 aa8.36□□□□□ -1.07
SIN3A-208ENST00000567289 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.36□□□□□ -1.07
SIN3A-208ENST00000567289 UNQ6190/PRO20217Q6UXQ8 127 aa8.36□□□□□ -1.07
SIN3A-208ENST00000567289 IGKV2-28A0A075B6P5 120 aa8.35□□□□□ -1.07
SIN3A-208ENST00000567289 A0A096LNI7 61 aa8.35□□□□□ -1.07
SIN3A-208ENST00000567289 IGKV2D-28P01615 120 aa8.35□□□□□ -1.07
SIN3A-208ENST00000567289 CELA1Q9UNI1 258 aa8.35□□□□□ -1.07
SIN3A-208ENST00000567289 SPART-AS1P0CW21 52 aa8.35□□□□□ -1.07
SIN3A-208ENST00000567289 FLNAP21333 2647 aaKnown RBP8.34□□□□□ -1.07
SIN3A-208ENST00000567289 IGHV4-31P0DP07 118 aa8.34□□□□□ -1.07
SIN3A-208ENST00000567289 NTM-AS1Q6ZSK4 140 aa8.34□□□□□ -1.07
SIN3A-208ENST00000567289 NDUFC2O95298 119 aa8.34□□□□□ -1.08
SIN3A-208ENST00000567289 ZNF575Q86XF7 245 aa8.34□□□□□ -1.08
SIN3A-208ENST00000567289 SMCR5Q8TEV8 140 aa8.34□□□□□ -1.08
SIN3A-208ENST00000567289 ITPR1Q14643 2758 aa8.33□□□□□ -1.08
SIN3A-208ENST00000567289 C4orf26Q17RF5 130 aa8.33□□□□□ -1.08
SIN3A-208ENST00000567289 Q8N814 137 aa8.33□□□□□ -1.08
SIN3A-208ENST00000567289 LITAFQ99732 161 aa8.33□□□□□ -1.08
SIN3A-208ENST00000567289 ZNF843Q8N446 348 aa8.32□□□□□ -1.08
SIN3A-208ENST00000567289 FAM19A4Q96LR4 140 aa8.32□□□□□ -1.08
SIN3A-208ENST00000567289 RMI2Q96E14 147 aa8.32□□□□□ -1.08
SIN3A-208ENST00000567289 MAST4O15021 2626 aa8.32□□□□□ -1.08
SIN3A-208ENST00000567289 ATP5EP2Q5VTU8 51 aa8.31□□□□□ -1.08
SIN3A-208ENST00000567289 C6orf223Q8N319 242 aa8.31□□□□□ -1.08
SIN3A-208ENST00000567289 Q8N3U1 123 aa8.31□□□□□ -1.08
SIN3A-208ENST00000567289 Q8N9L7 120 aa8.31□□□□□ -1.08
SIN3A-208ENST00000567289 CYSRT1A8MQ03 144 aa8.3□□□□□ -1.08
SIN3A-208ENST00000567289 A0A087WZ39 114 aa8.3□□□□□ -1.08
SIN3A-208ENST00000567289 CFAP46Q8IYW2 2715 aa8.3□□□□□ -1.08
SIN3A-208ENST00000567289 NDUFS5O43920 106 aa8.29□□□□□ -1.08
SIN3A-208ENST00000567289 CD164L2Q6UWJ8 174 aa8.29□□□□□ -1.08
SIN3A-208ENST00000567289 NANOS2P60321 138 aaKnown RBP8.29□□□□□ -1.08
SIN3A-208ENST00000567289 SPTSSBQ8NFR3 76 aa8.29□□□□□ -1.08
SIN3A-208ENST00000567289 LINC01006Q8NI28 216 aa8.29□□□□□ -1.08
SIN3A-208ENST00000567289 ITPR3Q14573 2671 aa8.29□□□□□ -1.08
SIN3A-208ENST00000567289 IGLV5-39A0A0G2JS06 123 aa8.29□□□□□ -1.08
SIN3A-208ENST00000567289 KRTAP10-9P60411 292 aa8.29□□□□□ -1.08
SIN3A-208ENST00000567289 UBE2DNLQ8IWF7 75 aa8.29□□□□□ -1.08
SIN3A-208ENST00000567289 PDE6GP18545 87 aa8.29□□□□□ -1.08
SIN3A-208ENST00000567289 IGKV2-24A0A0C4DH68 120 aa8.28□□□□□ -1.08
SIN3A-208ENST00000567289 NDUFC2-KCTD14E9PQ53 114 aa8.28□□□□□ -1.08
SIN3A-208ENST00000567289 TRBV10-3A0A0K0K1G6 114 aa8.28□□□□□ -1.08
SIN3A-208ENST00000567289 C11orf72Q8NBR9 251 aa8.28□□□□□ -1.08
SIN3A-208ENST00000567289 HIGD2AQ9BW72 106 aa8.27□□□□□ -1.09
SIN3A-208ENST00000567289 FAM30AQ9NZY2 134 aa8.27□□□□□ -1.09
SIN3A-208ENST00000567289 A0A0J9YWU9 116 aa8.26□□□□□ -1.09
SIN3A-208ENST00000567289 RPL37AP8A6NKH3 93 aa8.26□□□□□ -1.09
SIN3A-208ENST00000567289 CDK2AP2O75956 126 aa8.26□□□□□ -1.09
SIN3A-208ENST00000567289 BEAN1Q3B7T3 259 aa8.26□□□□□ -1.09
SIN3A-208ENST00000567289 Q8IZM0 81 aa8.26□□□□□ -1.09
SIN3A-208ENST00000567289 MIFP14174 115 aa8.26□□□□□ -1.09
SIN3A-208ENST00000567289 CSMD1Q96PZ7 3565 aa8.25□□□□□ -1.09
SIN3A-208ENST00000567289 FAM19A3Q7Z5A8 133 aa8.25□□□□□ -1.09
SIN3A-208ENST00000567289 WFDC10BQ8IUB3 73 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms