RNA–Protein interactions for RNA: ENST00000567234.1

LINC00543-201, long intergenic non-protein coding RNA 543, humanhuman

BASIC

Gene LINC00543, Length 1,845 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00543-201ENST00000567234 UQCRQO14949 82 aa16.28■□□□□ 0.2
LINC00543-201ENST00000567234 PRSS2P07478 247 aa16.28■□□□□ 0.2
LINC00543-201ENST00000567234 IGHV3-64A0A075B6Q5 118 aa16.27■□□□□ 0.2
LINC00543-201ENST00000567234 GYPEP15421 78 aa16.26■□□□□ 0.19
LINC00543-201ENST00000567234 EGFEM1PQ0D2K5 195 aa16.26■□□□□ 0.19
LINC00543-201ENST00000567234 LINC00242Q5T6M2 205 aa16.26■□□□□ 0.19
LINC00543-201ENST00000567234 C3orf22Q8N5N4 141 aa16.26■□□□□ 0.19
LINC00543-201ENST00000567234 A8MZ25 164 aa16.26■□□□□ 0.19
LINC00543-201ENST00000567234 CIRBPQ14011 172 aaKnown RBP16.25■□□□□ 0.19
LINC00543-201ENST00000567234 DAND5Q8N907 189 aa16.25■□□□□ 0.19
LINC00543-201ENST00000567234 CDKN2A-AS1Q9UH64 79 aa16.25■□□□□ 0.19
LINC00543-201ENST00000567234 TRAV8-3A0A0A6YYJ7 113 aa16.24■□□□□ 0.19
LINC00543-201ENST00000567234 A0A1B0GX51 115 aa16.24■□□□□ 0.19
LINC00543-201ENST00000567234 TRACP01848 142 aa16.24■□□□□ 0.19
LINC00543-201ENST00000567234 DAD1P61803 113 aa16.24■□□□□ 0.19
LINC00543-201ENST00000567234 LINC00526Q96FQ7 95 aa16.24■□□□□ 0.19
LINC00543-201ENST00000567234 NDUFA1O15239 70 aa16.24■□□□□ 0.19
LINC00543-201ENST00000567234 COX7A2LO14548 114 aa16.23■□□□□ 0.19
LINC00543-201ENST00000567234 ADAMTSL4-AS1Q5T5F5 129 aa16.23■□□□□ 0.19
LINC00543-201ENST00000567234 NBEAL2Q6ZNJ1 2754 aa16.22■□□□□ 0.19
LINC00543-201ENST00000567234 PAX4O43316 350 aa16.22■□□□□ 0.19
LINC00543-201ENST00000567234 SPART-AS1P0CW21 52 aa16.22■□□□□ 0.19
LINC00543-201ENST00000567234 KRTAP10-11P60412 298 aa16.22■□□□□ 0.19
LINC00543-201ENST00000567234 COX6A2Q02221 97 aa16.22■□□□□ 0.19
LINC00543-201ENST00000567234 CHCHD5Q9BSY4 110 aa16.22■□□□□ 0.19
LINC00543-201ENST00000567234 DEFB4AO15263 64 aa16.22■□□□□ 0.19
LINC00543-201ENST00000567234 TRAV13-1A0A0B4J241 112 aa16.2■□□□□ 0.18
LINC00543-201ENST00000567234 IGLV5-39A0A0G2JS06 123 aa16.2■□□□□ 0.18
LINC00543-201ENST00000567234 INAFM2P0DMQ5 153 aa16.2■□□□□ 0.18
LINC00543-201ENST00000567234 CLEC2BQ92478 149 aa16.2■□□□□ 0.18
LINC00543-201ENST00000567234 FAM236AA0A1B0GUQ0 79 aa16.19■□□□□ 0.18
LINC00543-201ENST00000567234 FAM236BA0A1B0GV22 79 aa16.19■□□□□ 0.18
LINC00543-201ENST00000567234 C5orf38Q86SI9 138 aa16.19■□□□□ 0.18
LINC00543-201ENST00000567234 RPS28P62857 69 aaKnown RBP16.18■□□□□ 0.18
LINC00543-201ENST00000567234 CELA1Q9UNI1 258 aa16.18■□□□□ 0.18
LINC00543-201ENST00000567234 C9orf153Q5TBE3 101 aa16.17■□□□□ 0.18
LINC00543-201ENST00000567234 A0A1B0GUV1 79 aa16.15■□□□□ 0.18
LINC00543-201ENST00000567234 IGLV4-60A0A075B6I1 120 aa16.15■□□□□ 0.18
LINC00543-201ENST00000567234 SMIM1B2RUZ4 78 aa16.15■□□□□ 0.18
LINC00543-201ENST00000567234 F5H768 121 aa16.14■□□□□ 0.17
LINC00543-201ENST00000567234 NOTCH1P46531 2555 aa16.14■□□□□ 0.17
LINC00543-201ENST00000567234 J3KT08 172 aa16.12■□□□□ 0.17
LINC00543-201ENST00000567234 ATOX1O00244 68 aa16.12■□□□□ 0.17
LINC00543-201ENST00000567234 CRYGAP11844 174 aa16.12■□□□□ 0.17
LINC00543-201ENST00000567234 COX7CP15954 63 aa16.12■□□□□ 0.17
LINC00543-201ENST00000567234 HIST1H4AP62805 103 aaKnown RBP16.11■□□□□ 0.17
LINC00543-201ENST00000567234 LINC00308Q8TCZ7 52 aa16.11■□□□□ 0.17
LINC00543-201ENST00000567234 MGAM2Q2M2H8 2515 aa16.1■□□□□ 0.17
LINC00543-201ENST00000567234 NBEAL1Q6ZS30 2694 aa16.08■□□□□ 0.17
LINC00543-201ENST00000567234 DNAH3Q8TD57 4116 aa16.06■□□□□ 0.16
LINC00543-201ENST00000567234 PRB2P02812 416 aaPredicted RBP16.06■□□□□ 0.16
LINC00543-201ENST00000567234 A0A096LPF7 62 aa16.05■□□□□ 0.16
LINC00543-201ENST00000567234 IGHV3OR16-9A0A0B4J2B5 98 aa16.05■□□□□ 0.16
LINC00543-201ENST00000567234 C5orf47Q569G3 176 aa16.05■□□□□ 0.16
LINC00543-201ENST00000567234 LINC00959A0A1B0GUT2 108 aa16.05■□□□□ 0.16
LINC00543-201ENST00000567234 SMCR5Q8TEV8 140 aa16.05■□□□□ 0.16
LINC00543-201ENST00000567234 C11orf68Q9H3H3 251 aaKnown RBP16.05■□□□□ 0.16
LINC00543-201ENST00000567234 Q9H8V8 135 aa16.05■□□□□ 0.16
LINC00543-201ENST00000567234 BAALC-AS2P0C853 105 aa16.04■□□□□ 0.16
LINC00543-201ENST00000567234 ZNF625Q96I27 306 aaPredicted RBP16.03■□□□□ 0.16
LINC00543-201ENST00000567234 A0A087WZ39 114 aa16.02■□□□□ 0.16
LINC00543-201ENST00000567234 IGKV3OR2-268A0A0C4DH90 116 aa16.02■□□□□ 0.16
LINC00543-201ENST00000567234 HTN3P15516 51 aa16.02■□□□□ 0.16
LINC00543-201ENST00000567234 SS18Q15532 418 aa16.01■□□□□ 0.15
LINC00543-201ENST00000567234 TRAV13-2A0A0B4J235 113 aa16.01■□□□□ 0.15
LINC00543-201ENST00000567234 RETNQ9HD89 108 aa16.01■□□□□ 0.15
LINC00543-201ENST00000567234 H3BNG1 76 aa16■□□□□ 0.15
LINC00543-201ENST00000567234 LELP1Q5T871 98 aa16■□□□□ 0.15
LINC00543-201ENST00000567234 C2orf48Q96LS8 159 aa16■□□□□ 0.15
LINC00543-201ENST00000567234 RPL28P46779 137 aaKnown RBP15.99■□□□□ 0.15
LINC00543-201ENST00000567234 GAGE2AQ6NT46 116 aa15.99■□□□□ 0.15
LINC00543-201ENST00000567234 COX7B2Q8TF08 81 aa15.98■□□□□ 0.15
LINC00543-201ENST00000567234 LINC01561Q8N1V8 128 aa15.98■□□□□ 0.15
LINC00543-201ENST00000567234 OR13C6PQ8NH95 151 aa15.98■□□□□ 0.15
LINC00543-201ENST00000567234 DNHD1Q96M86 4753 aa15.98■□□□□ 0.15
LINC00543-201ENST00000567234 TMEM258P61165 79 aa15.97■□□□□ 0.15
LINC00543-201ENST00000567234 NPC2P61916 151 aa15.97■□□□□ 0.15
LINC00543-201ENST00000567234 Q6JHZ5 121 aa15.97■□□□□ 0.15
LINC00543-201ENST00000567234 MALP21145 153 aa15.96■□□□□ 0.14
LINC00543-201ENST00000567234 RPL18AQ02543 176 aaKnown RBP15.95■□□□□ 0.14
LINC00543-201ENST00000567234 C22orf24Q9Y442 160 aa15.95■□□□□ 0.14
LINC00543-201ENST00000567234 KRTAP21-3Q3LHN1 58 aa15.94■□□□□ 0.14
LINC00543-201ENST00000567234 KPRPQ5T749 579 aaPredicted RBP15.94■□□□□ 0.14
LINC00543-201ENST00000567234 OBSCN-AS1Q96MR7 158 aa15.94■□□□□ 0.14
LINC00543-201ENST00000567234 H0YGX0 51 aa15.93■□□□□ 0.14
LINC00543-201ENST00000567234 LINC00269Q8N2A0 174 aa15.92■□□□□ 0.14
LINC00543-201ENST00000567234 K7EIL1 84 aa15.91■□□□□ 0.14
LINC00543-201ENST00000567234 ANGP03950 147 aaKnown RBP15.91■□□□□ 0.14
LINC00543-201ENST00000567234 XCL1P47992 114 aa15.91■□□□□ 0.14
LINC00543-201ENST00000567234 SOSTDC1Q6X4U4 206 aa15.9■□□□□ 0.14
LINC00543-201ENST00000567234 SERP2Q8N6R1 65 aa15.9■□□□□ 0.14
LINC00543-201ENST00000567234 TOMM7Q9P0U1 55 aa15.9■□□□□ 0.14
LINC00543-201ENST00000567234 DNAL4O96015 105 aa15.89■□□□□ 0.13
LINC00543-201ENST00000567234 REG3AQ06141 175 aa15.89■□□□□ 0.13
LINC00543-201ENST00000567234 CD164L2Q6UWJ8 174 aa15.89■□□□□ 0.13
LINC00543-201ENST00000567234 LYPD5Q6UWN5 251 aa15.89■□□□□ 0.13
LINC00543-201ENST00000567234 Q6ZTC4 211 aa15.89■□□□□ 0.13
LINC00543-201ENST00000567234 CLPSL2Q6UWE3 100 aa15.88■□□□□ 0.13
LINC00543-201ENST00000567234 A0A0J9YWU9 116 aa15.87■□□□□ 0.13
LINC00543-201ENST00000567234 CRPP02741 224 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 100.4 ms