RNA–Protein interactions for RNA: ENST00000566772.1

KARS-208, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 2

Gene KARS, Length 644 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-208ENST00000566772 DNAH2Q9P225 4427 aa2.78□□□□□ -1.96
KARS-208ENST00000566772 HERC1Q15751 4861 aa2.78□□□□□ -1.96
KARS-208ENST00000566772 TRAV5A0A0B4J249 113 aa2.78□□□□□ -1.96
KARS-208ENST00000566772 NBDYA0A0U1RRE5 68 aa2.78□□□□□ -1.96
KARS-208ENST00000566772 CORTO00230 105 aa2.78□□□□□ -1.96
KARS-208ENST00000566772 DEFB130BP0DP73 79 aa2.78□□□□□ -1.96
KARS-208ENST00000566772 DEFB130AP0DP74 79 aa2.78□□□□□ -1.96
KARS-208ENST00000566772 DEFB1P60022 68 aa2.78□□□□□ -1.96
KARS-208ENST00000566772 RNASE10Q5GAN6 216 aaKnown RBP2.78□□□□□ -1.96
KARS-208ENST00000566772 OR5H6Q8NGV6 325 aa2.78□□□□□ -1.96
KARS-208ENST00000566772 TXNDC17Q9BRA2 123 aa2.78□□□□□ -1.96
KARS-208ENST00000566772 FXYD6Q9H0Q3 95 aa2.78□□□□□ -1.96
KARS-208ENST00000566772 DNAH17Q9UFH2 4485 aa2.78□□□□□ -1.97
KARS-208ENST00000566772 HIST1H2BKO60814 126 aa2.77□□□□□ -1.97
KARS-208ENST00000566772 HIST1H2BJP06899 126 aa2.77□□□□□ -1.97
KARS-208ENST00000566772 FABP2P12104 132 aa2.77□□□□□ -1.97
KARS-208ENST00000566772 HLA-DRB4P13762 266 aa2.77□□□□□ -1.97
KARS-208ENST00000566772 ETV6P41212 452 aa2.77□□□□□ -1.97
KARS-208ENST00000566772 RPS28P62857 69 aaKnown RBP2.77□□□□□ -1.97
KARS-208ENST00000566772 SPANXN5Q5MJ07 72 aa2.77□□□□□ -1.97
KARS-208ENST00000566772 GDF5OSQ5U4N7 250 aa2.77□□□□□ -1.97
KARS-208ENST00000566772 PHF5AQ7RTV0 110 aaKnown RBP2.77□□□□□ -1.97
KARS-208ENST00000566772 C15orf53Q8NAA6 179 aa2.77□□□□□ -1.97
KARS-208ENST00000566772 TMEM229BQ8NBD8 167 aa2.77□□□□□ -1.97
KARS-208ENST00000566772 S100A16Q96FQ6 103 aaKnown RBP2.77□□□□□ -1.97
KARS-208ENST00000566772 SLC35B3Q9H1N7 401 aa2.77□□□□□ -1.97
KARS-208ENST00000566772 CST9LQ9H4G1 147 aa2.77□□□□□ -1.97
KARS-208ENST00000566772 MRPL36Q9P0J6 103 aaKnown RBP2.77□□□□□ -1.97
KARS-208ENST00000566772 HLA-DRB4X5D2U9 266 aa2.77□□□□□ -1.97
KARS-208ENST00000566772 TRAV30A0A087WSZ9 112 aa2.76□□□□□ -1.97
KARS-208ENST00000566772 A0A1B0GX51 115 aa2.76□□□□□ -1.97
KARS-208ENST00000566772 CEBPZOSA8MTT3 80 aa2.76□□□□□ -1.97
KARS-208ENST00000566772 A8MWV9 139 aa2.76□□□□□ -1.97
KARS-208ENST00000566772 ZNF705BP0CI00 300 aaPredicted RBP2.76□□□□□ -1.97
KARS-208ENST00000566772 HTN1P15515 57 aa2.76□□□□□ -1.97
KARS-208ENST00000566772 SDC2P34741 201 aa2.76□□□□□ -1.97
KARS-208ENST00000566772 RPL35P42766 123 aaKnown RBP2.76□□□□□ -1.97
KARS-208ENST00000566772 CCL18P55774 89 aa2.76□□□□□ -1.97
KARS-208ENST00000566772 KRTAP10-10P60014 251 aa2.76□□□□□ -1.97
KARS-208ENST00000566772 PSG9Q00887 426 aa2.76□□□□□ -1.97
KARS-208ENST00000566772 ZNF846Q147U1 533 aa2.76□□□□□ -1.97
KARS-208ENST00000566772 IZUMO2Q6UXV1 221 aa2.76□□□□□ -1.97
KARS-208ENST00000566772 FOXI2Q6ZQN5 318 aa2.76□□□□□ -1.97
KARS-208ENST00000566772 SNX29P2Q8IUI4 249 aa2.76□□□□□ -1.97
KARS-208ENST00000566772 DNAH11Q96DT5 4516 aa2.76□□□□□ -1.97
KARS-208ENST00000566772 C3orf85A0A1B0GTC6 90 aa2.75□□□□□ -1.97
KARS-208ENST00000566772 M0R2Z0 102 aa2.75□□□□□ -1.97
KARS-208ENST00000566772 IGLC1P0CG04 106 aa2.75□□□□□ -1.97
KARS-208ENST00000566772 NEDD8Q15843 81 aa2.75□□□□□ -1.97
KARS-208ENST00000566772 TP53RKQ96S44 253 aa2.75□□□□□ -1.97
KARS-208ENST00000566772 RETNLBQ9BQ08 111 aa2.75□□□□□ -1.97
KARS-208ENST00000566772 LINC00467Q9BRT7 94 aa2.75□□□□□ -1.97
KARS-208ENST00000566772 RPRMQ9NS64 109 aa2.75□□□□□ -1.97
KARS-208ENST00000566772 COPZ2Q9P299 210 aa2.75□□□□□ -1.97
KARS-208ENST00000566772 PAIP2BQ9ULR5 123 aaKnown RBP2.75□□□□□ -1.97
KARS-208ENST00000566772 DYNC1H1Q14204 4646 aaKnown RBP2.74□□□□□ -1.97
KARS-208ENST00000566772 HSPG2P98160 4391 aa2.74□□□□□ -1.97
KARS-208ENST00000566772 TRAV12-2A0A075B6T6 113 aa2.74□□□□□ -1.97
KARS-208ENST00000566772 A0A0J9YY99 117 aa2.74□□□□□ -1.97
KARS-208ENST00000566772 SMIM31A0A1B0GVY4 71 aa2.74□□□□□ -1.97
KARS-208ENST00000566772 SLC25A4P12235 298 aa2.74□□□□□ -1.97
KARS-208ENST00000566772 LSM3P62310 102 aaKnown RBP2.74□□□□□ -1.97
KARS-208ENST00000566772 SPINK13Q1W4C9 94 aa2.74□□□□□ -1.97
KARS-208ENST00000566772 Q5VSD8 79 aa2.74□□□□□ -1.97
KARS-208ENST00000566772 OR8I2Q8N0Y5 310 aa2.74□□□□□ -1.97
KARS-208ENST00000566772 APOBP04114 4563 aaKnown RBP2.73□□□□□ -1.97
KARS-208ENST00000566772 IGHV1-58A0A0C4DH39 117 aa2.73□□□□□ -1.97
KARS-208ENST00000566772 LOC107984640A0A0U1RRK4 108 aa2.73□□□□□ -1.97
KARS-208ENST00000566772 BAALC-AS2P0C853 105 aa2.73□□□□□ -1.97
KARS-208ENST00000566772 PRB4P10163 310 aaPredicted RBP2.73□□□□□ -1.97
KARS-208ENST00000566772 HAMPP81172 84 aa2.73□□□□□ -1.97
KARS-208ENST00000566772 HIST1H1AQ02539 215 aaPredicted RBP2.73□□□□□ -1.97
KARS-208ENST00000566772 LINC00305Q7Z4B0 112 aa2.73□□□□□ -1.97
KARS-208ENST00000566772 NOP10Q9NPE3 64 aaKnown RBP2.73□□□□□ -1.97
KARS-208ENST00000566772 COMMD3Q9UBI1 195 aa2.73□□□□□ -1.97
KARS-208ENST00000566772 SNRPGP15A8MWD9 76 aa2.72□□□□□ -1.97
KARS-208ENST00000566772 FAM25AB3EWG3 89 aa2.72□□□□□ -1.97
KARS-208ENST00000566772 FAM25CB3EWG5 89 aa2.72□□□□□ -1.97
KARS-208ENST00000566772 FAM25GB3EWG6 89 aa2.72□□□□□ -1.97
KARS-208ENST00000566772 SMR3BP02814 79 aaPredicted RBP2.72□□□□□ -1.97
KARS-208ENST00000566772 NDUFA6P56556 154 aa2.72□□□□□ -1.97
KARS-208ENST00000566772 CKS1BP61024 79 aa2.72□□□□□ -1.97
KARS-208ENST00000566772 ELOBQ15370 118 aa2.72□□□□□ -1.97
KARS-208ENST00000566772 Q9H521 79 aa2.72□□□□□ -1.97
KARS-208ENST00000566772 C14orf132Q9NPU4 83 aa2.72□□□□□ -1.97
KARS-208ENST00000566772 MYCBP2O75592 4640 aa2.71□□□□□ -1.98
KARS-208ENST00000566772 MT-ND6P03923 174 aa2.71□□□□□ -1.98
KARS-208ENST00000566772 CD3DP04234 171 aa2.71□□□□□ -1.98
KARS-208ENST00000566772 Q1T7F1 81 aa2.71□□□□□ -1.98
KARS-208ENST00000566772 CHCHD1Q96BP2 118 aaKnown RBP2.71□□□□□ -1.98
KARS-208ENST00000566772 SPANXCQ9NY87 97 aa2.71□□□□□ -1.98
KARS-208ENST00000566772 TIMM8BQ9Y5J9 83 aaPredicted RBP2.71□□□□□ -1.98
KARS-208ENST00000566772 FLG2Q5D862 2391 aaPredicted RBP2.71□□□□□ -1.98
KARS-208ENST00000566772 TRGV2A0A075B6R0 118 aa2.7□□□□□ -1.98
KARS-208ENST00000566772 A0A096LPF7 62 aa2.7□□□□□ -1.98
KARS-208ENST00000566772 BORCS7-ASMTA0A0B4J1R7 106 aa2.7□□□□□ -1.98
KARS-208ENST00000566772 TRBV7-6A0A0J9YX20 115 aa2.7□□□□□ -1.98
KARS-208ENST00000566772 IAPPP10997 89 aa2.7□□□□□ -1.98
KARS-208ENST00000566772 ROMO1P60602 79 aa2.7□□□□□ -1.98
KARS-208ENST00000566772 NMSQ5H8A3 153 aa2.7□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms