RNA–Protein interactions for RNA: ENST00000566723.1

SMPD3-208, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 4

Gene SMPD3, Length 524 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-208ENST00000566723 ALKBH7Q9BT30 221 aaPredicted RBP9.17□□□□□ -0.94
SMPD3-208ENST00000566723 CDKN2A-AS1Q9UH64 79 aa9.17□□□□□ -0.94
SMPD3-208ENST00000566723 IGLV1-50A0A075B6I6 118 aa9.16□□□□□ -0.94
SMPD3-208ENST00000566723 CLLU1Q5K131 121 aa9.16□□□□□ -0.94
SMPD3-208ENST00000566723 GEMIN7Q9H840 131 aaKnown RBP9.16□□□□□ -0.94
SMPD3-208ENST00000566723 ADCYAP1P18509 176 aa9.15□□□□□ -0.94
SMPD3-208ENST00000566723 KIAA1644Q3SXP7 199 aa9.15□□□□□ -0.94
SMPD3-208ENST00000566723 LINC00469Q8N7U9 141 aa9.15□□□□□ -0.94
SMPD3-208ENST00000566723 TRAV9-1A0A075B6T8 112 aa9.14□□□□□ -0.95
SMPD3-208ENST00000566723 F8VRH5 84 aa9.14□□□□□ -0.95
SMPD3-208ENST00000566723 CXCL5P42830 114 aa9.14□□□□□ -0.95
SMPD3-208ENST00000566723 ERASQ7Z444 233 aa9.14□□□□□ -0.95
SMPD3-208ENST00000566723 XAGE1AQ9HD64 81 aa9.14□□□□□ -0.95
SMPD3-208ENST00000566723 C22orf24Q9Y442 160 aa9.13□□□□□ -0.95
SMPD3-208ENST00000566723 SMIM1B2RUZ4 78 aa9.12□□□□□ -0.95
SMPD3-208ENST00000566723 NUPR1O60356 82 aa9.12□□□□□ -0.95
SMPD3-208ENST00000566723 UQCC3Q6UW78 93 aa9.12□□□□□ -0.95
SMPD3-208ENST00000566723 SCGB3A1Q96QR1 104 aa9.12□□□□□ -0.95
SMPD3-208ENST00000566723 RPL13AP40429 203 aaKnown RBP9.11□□□□□ -0.95
SMPD3-208ENST00000566723 LBHQ53QV2 105 aaPredicted RBP9.11□□□□□ -0.95
SMPD3-208ENST00000566723 IGLV5-45A0A087WSX0 123 aa9.1□□□□□ -0.95
SMPD3-208ENST00000566723 TINCRA0A1B0GVN0 87 aa9.1□□□□□ -0.95
SMPD3-208ENST00000566723 TMEM218A2RU14 115 aa9.1□□□□□ -0.95
SMPD3-208ENST00000566723 LINC01546A6NGU7 62 aa9.1□□□□□ -0.95
SMPD3-208ENST00000566723 LINC01549A6NIU2 74 aa9.1□□□□□ -0.95
SMPD3-208ENST00000566723 ZNF861PO60384 105 aa9.1□□□□□ -0.95
SMPD3-208ENST00000566723 GNB1LQ9BYB4 327 aa9.1□□□□□ -0.95
SMPD3-208ENST00000566723 TP73-AS1Q9UF72 201 aa9.1□□□□□ -0.95
SMPD3-208ENST00000566723 S100PP25815 95 aa9.09□□□□□ -0.95
SMPD3-208ENST00000566723 PDZD11Q5EBL8 140 aa9.09□□□□□ -0.95
SMPD3-208ENST00000566723 MRPL55Q7Z7F7 128 aaKnown RBP9.09□□□□□ -0.95
SMPD3-208ENST00000566723 COX7B2Q8TF08 81 aa9.09□□□□□ -0.95
SMPD3-208ENST00000566723 CARHSP1Q9Y2V2 147 aaKnown RBP9.08□□□□□ -0.96
SMPD3-208ENST00000566723 SEC11CQ9BY50 192 aa9.07□□□□□ -0.96
SMPD3-208ENST00000566723 CST9LQ9H4G1 147 aa9.07□□□□□ -0.96
SMPD3-208ENST00000566723 SPINK8P0C7L1 97 aa9.05□□□□□ -0.96
SMPD3-208ENST00000566723 IFITM2Q01629 132 aa9.05□□□□□ -0.96
SMPD3-208ENST00000566723 PMVKQ15126 192 aa9.05□□□□□ -0.96
SMPD3-208ENST00000566723 COX19Q49B96 90 aa9.05□□□□□ -0.96
SMPD3-208ENST00000566723 FA2HQ7L5A8 372 aa9.05□□□□□ -0.96
SMPD3-208ENST00000566723 SMCO4Q9NRQ5 59 aa9.05□□□□□ -0.96
SMPD3-208ENST00000566723 BCE1O60756 84 aa9.04□□□□□ -0.96
SMPD3-208ENST00000566723 RPL28P46779 137 aaKnown RBP9.04□□□□□ -0.96
SMPD3-208ENST00000566723 LINC00167Q96N53 147 aa9.03□□□□□ -0.96
SMPD3-208ENST00000566723 MRPL18Q9H0U6 180 aaKnown RBP9.03□□□□□ -0.96
SMPD3-208ENST00000566723 IGLV5-37A0A075B6J1 123 aa9.02□□□□□ -0.97
SMPD3-208ENST00000566723 RPL37AP8A6NKH3 93 aa9.02□□□□□ -0.97
SMPD3-208ENST00000566723 H3BRM9 83 aa9.02□□□□□ -0.97
SMPD3-208ENST00000566723 FABP9Q0Z7S8 132 aa9.02□□□□□ -0.97
SMPD3-208ENST00000566723 GAGE10A6NGK3 116 aa9.01□□□□□ -0.97
SMPD3-208ENST00000566723 RAB5BP61020 215 aa9.01□□□□□ -0.97
SMPD3-208ENST00000566723 NKAPP1Q8N9T2 125 aa9.01□□□□□ -0.97
SMPD3-208ENST00000566723 ATP5LO75964 103 aa9□□□□□ -0.97
SMPD3-208ENST00000566723 IGLC3P0DOY3 106 aa9□□□□□ -0.97
SMPD3-208ENST00000566723 RHEBQ15382 184 aa9□□□□□ -0.97
SMPD3-208ENST00000566723 PRR4Q16378 134 aa9□□□□□ -0.97
SMPD3-208ENST00000566723 COMMD7Q86VX2 200 aa9□□□□□ -0.97
SMPD3-208ENST00000566723 A0A087X002 238 aa8.99□□□□□ -0.97
SMPD3-208ENST00000566723 A0A096LNJ9 63 aa8.98□□□□□ -0.97
SMPD3-208ENST00000566723 IGLV5-39A0A0G2JS06 123 aa8.98□□□□□ -0.97
SMPD3-208ENST00000566723 C10orf91Q5T1B1 145 aa8.98□□□□□ -0.97
SMPD3-208ENST00000566723 RPS10P5Q9NQ39 176 aa8.98□□□□□ -0.97
SMPD3-208ENST00000566723 CRYGAP11844 174 aa8.97□□□□□ -0.97
SMPD3-208ENST00000566723 ZNF22P17026 224 aaPredicted RBP8.97□□□□□ -0.97
SMPD3-208ENST00000566723 KRTAP13-1Q8IUC0 172 aa8.97□□□□□ -0.97
SMPD3-208ENST00000566723 PFN2P35080 140 aa8.96□□□□□ -0.98
SMPD3-208ENST00000566723 UBE2AP49459 152 aa8.96□□□□□ -0.98
SMPD3-208ENST00000566723 NDUFA6P56556 154 aa8.96□□□□□ -0.98
SMPD3-208ENST00000566723 C18orf32Q8TCD1 76 aa8.96□□□□□ -0.98
SMPD3-208ENST00000566723 IGKV2-28A0A075B6P5 120 aa8.95□□□□□ -0.98
SMPD3-208ENST00000566723 IGKV2D-28P01615 120 aa8.95□□□□□ -0.98
SMPD3-208ENST00000566723 HBDP02042 147 aa8.95□□□□□ -0.98
SMPD3-208ENST00000566723 TYMSOSQ8TAI1 123 aa8.95□□□□□ -0.98
SMPD3-208ENST00000566723 URB1-AS1Q96HZ7 61 aa8.95□□□□□ -0.98
SMPD3-208ENST00000566723 SCO1O75880 301 aa8.94□□□□□ -0.98
SMPD3-208ENST00000566723 TSPAN13O95857 204 aa8.94□□□□□ -0.98
SMPD3-208ENST00000566723 LINC00614P0C842 121 aa8.94□□□□□ -0.98
SMPD3-208ENST00000566723 ERG28Q9UKR5 140 aa8.94□□□□□ -0.98
SMPD3-208ENST00000566723 TRAPPC1Q9Y5R8 145 aa8.94□□□□□ -0.98
SMPD3-208ENST00000566723 MUC2Q02817 5179 aa8.94□□□□□ -0.98
SMPD3-208ENST00000566723 VPREB1P12018 145 aa8.93□□□□□ -0.98
SMPD3-208ENST00000566723 PMCHL1Q16048 86 aa8.93□□□□□ -0.98
SMPD3-208ENST00000566723 SND1-IT1Q9HBX3 110 aa8.93□□□□□ -0.98
SMPD3-208ENST00000566723 C11orf86A6NJI1 115 aa8.92□□□□□ -0.98
SMPD3-208ENST00000566723 COX17Q14061 63 aa8.92□□□□□ -0.98
SMPD3-208ENST00000566723 ANAPC11Q9NYG5 84 aa8.92□□□□□ -0.98
SMPD3-208ENST00000566723 FAM229BQ4G0N7 80 aa8.91□□□□□ -0.98
SMPD3-208ENST00000566723 KRTAP13-2Q52LG2 175 aa8.91□□□□□ -0.98
SMPD3-208ENST00000566723 SFTA2Q6UW10 78 aa8.91□□□□□ -0.98
SMPD3-208ENST00000566723 RPL24P83731 157 aaKnown RBP8.9□□□□□ -0.98
SMPD3-208ENST00000566723 TMEM170BQ5T4T1 132 aa8.9□□□□□ -0.98
SMPD3-208ENST00000566723 BAGE3Q86Y29 109 aa8.9□□□□□ -0.98
SMPD3-208ENST00000566723 ZNF625Q96I27 306 aaPredicted RBP8.9□□□□□ -0.98
SMPD3-208ENST00000566723 PRLHP81277 87 aa8.89□□□□□ -0.99
SMPD3-208ENST00000566723 TMEM126AQ9H061 195 aa8.89□□□□□ -0.99
SMPD3-208ENST00000566723 TMEM238C9JI98 176 aa8.88□□□□□ -0.99
SMPD3-208ENST00000566723 FAM19A1Q7Z5A9 133 aa8.88□□□□□ -0.99
SMPD3-208ENST00000566723 Q8NDZ9 215 aa8.88□□□□□ -0.99
SMPD3-208ENST00000566723 M0R378 163 aa8.86□□□□□ -0.99
SMPD3-208ENST00000566723 APOC3P02656 99 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms