RNA–Protein interactions for RNA: ENST00000566703.1

RNF40-209, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 808 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-209ENST00000566703 ZNF861PO60384 105 aa8.99□□□□□ -0.97
RNF40-209ENST00000566703 LBHQ53QV2 105 aaPredicted RBP8.99□□□□□ -0.97
RNF40-209ENST00000566703 ZC2HC1BQ5TFG8 222 aa8.99□□□□□ -0.97
RNF40-209ENST00000566703 ALKBH7Q9BT30 221 aaPredicted RBP8.99□□□□□ -0.97
RNF40-209ENST00000566703 TOMM7Q9P0U1 55 aa8.99□□□□□ -0.97
RNF40-209ENST00000566703 RNF213Q63HN8 5207 aa8.98□□□□□ -0.97
RNF40-209ENST00000566703 HERVK_113P63121 156 aa8.98□□□□□ -0.97
RNF40-209ENST00000566703 C22orf24Q9Y442 160 aa8.98□□□□□ -0.97
RNF40-209ENST00000566703 F8VRH5 84 aa8.96□□□□□ -0.98
RNF40-209ENST00000566703 CXCL5P42830 114 aa8.96□□□□□ -0.98
RNF40-209ENST00000566703 TIMM17AQ99595 171 aa8.96□□□□□ -0.98
RNF40-209ENST00000566703 CTDSP1Q9GZU7 261 aa8.96□□□□□ -0.98
RNF40-209ENST00000566703 GEMIN7Q9H840 131 aaKnown RBP8.96□□□□□ -0.98
RNF40-209ENST00000566703 TP73-AS1Q9UF72 201 aa8.96□□□□□ -0.98
RNF40-209ENST00000566703 CDKN2A-AS1Q9UH64 79 aa8.95□□□□□ -0.98
RNF40-209ENST00000566703 LINC00469Q8N7U9 141 aa8.94□□□□□ -0.98
RNF40-209ENST00000566703 TOMM6Q96B49 74 aa8.94□□□□□ -0.98
RNF40-209ENST00000566703 XAGE1AQ9HD64 81 aa8.94□□□□□ -0.98
RNF40-209ENST00000566703 LINC01549A6NIU2 74 aa8.93□□□□□ -0.98
RNF40-209ENST00000566703 RAB14P61106 215 aa8.93□□□□□ -0.98
RNF40-209ENST00000566703 ERASQ7Z444 233 aa8.93□□□□□ -0.98
RNF40-209ENST00000566703 MRPL55Q7Z7F7 128 aaKnown RBP8.92□□□□□ -0.98
RNF40-209ENST00000566703 RPL28P46779 137 aaKnown RBP8.91□□□□□ -0.98
RNF40-209ENST00000566703 PRR4Q16378 134 aa8.91□□□□□ -0.98
RNF40-209ENST00000566703 PDZD11Q5EBL8 140 aa8.91□□□□□ -0.98
RNF40-209ENST00000566703 BCE1O60756 84 aa8.9□□□□□ -0.98
RNF40-209ENST00000566703 SCGB3A1Q96QR1 104 aa8.9□□□□□ -0.98
RNF40-209ENST00000566703 TRAV9-1A0A075B6T8 112 aa8.89□□□□□ -0.99
RNF40-209ENST00000566703 IGLV5-45A0A087WSX0 123 aa8.89□□□□□ -0.99
RNF40-209ENST00000566703 TINCRA0A1B0GVN0 87 aa8.89□□□□□ -0.99
RNF40-209ENST00000566703 SMIM1B2RUZ4 78 aa8.89□□□□□ -0.99
RNF40-209ENST00000566703 COX7B2Q8TF08 81 aa8.88□□□□□ -0.99
RNF40-209ENST00000566703 LINC00167Q96N53 147 aa8.88□□□□□ -0.99
RNF40-209ENST00000566703 LINC01546A6NGU7 62 aa8.87□□□□□ -0.99
RNF40-209ENST00000566703 CRYGAP11844 174 aa8.87□□□□□ -0.99
RNF40-209ENST00000566703 KIAA1644Q3SXP7 199 aa8.87□□□□□ -0.99
RNF40-209ENST00000566703 LPAP08519 4548 aa8.86□□□□□ -0.99
RNF40-209ENST00000566703 IGLV5-37A0A075B6J1 123 aa8.86□□□□□ -0.99
RNF40-209ENST00000566703 CLLU1Q5K131 121 aa8.86□□□□□ -0.99
RNF40-209ENST00000566703 CST9LQ9H4G1 147 aa8.86□□□□□ -0.99
RNF40-209ENST00000566703 ADCYAP1P18509 176 aa8.85□□□□□ -0.99
RNF40-209ENST00000566703 TYMSOSQ8TAI1 123 aa8.85□□□□□ -0.99
RNF40-209ENST00000566703 GNB1LQ9BYB4 327 aa8.85□□□□□ -0.99
RNF40-209ENST00000566703 MRPL18Q9H0U6 180 aaKnown RBP8.85□□□□□ -0.99
RNF40-209ENST00000566703 A0A087X002 238 aa8.83□□□□□ -1
RNF40-209ENST00000566703 RPL37AP8A6NKH3 93 aa8.83□□□□□ -1
RNF40-209ENST00000566703 TSPAN13O95857 204 aa8.83□□□□□ -1
RNF40-209ENST00000566703 PMVKQ15126 192 aa8.83□□□□□ -1
RNF40-209ENST00000566703 COX19Q49B96 90 aa8.83□□□□□ -1
RNF40-209ENST00000566703 UQCC3Q6UW78 93 aa8.83□□□□□ -1
RNF40-209ENST00000566703 NKAPP1Q8N9T2 125 aa8.82□□□□□ -1
RNF40-209ENST00000566703 TMEM218A2RU14 115 aa8.81□□□□□ -1
RNF40-209ENST00000566703 H3BRM9 83 aa8.81□□□□□ -1
RNF40-209ENST00000566703 S100PP25815 95 aa8.81□□□□□ -1
RNF40-209ENST00000566703 RAB5BP61020 215 aa8.81□□□□□ -1
RNF40-209ENST00000566703 KRTAP13-1Q8IUC0 172 aa8.81□□□□□ -1
RNF40-209ENST00000566703 A0A0U1RQV1 116 aa8.8□□□□□ -1
RNF40-209ENST00000566703 LOC105371267A0A1B0GV96 52 aa8.8□□□□□ -1
RNF40-209ENST00000566703 GAGE10A6NGK3 116 aa8.8□□□□□ -1
RNF40-209ENST00000566703 ATP5LO75964 103 aa8.8□□□□□ -1
RNF40-209ENST00000566703 SPINK8P0C7L1 97 aa8.8□□□□□ -1
RNF40-209ENST00000566703 UBE2AP49459 152 aa8.8□□□□□ -1
RNF40-209ENST00000566703 FAM229BQ4G0N7 80 aa8.8□□□□□ -1
RNF40-209ENST00000566703 CTAG1AP78358 180 aa8.79□□□□□ -1
RNF40-209ENST00000566703 FA2HQ7L5A8 372 aa8.79□□□□□ -1
RNF40-209ENST00000566703 SMCO4Q9NRQ5 59 aa8.79□□□□□ -1
RNF40-209ENST00000566703 SEC11CQ9BY50 192 aa8.78□□□□□ -1
RNF40-209ENST00000566703 IGLC3P0DOY3 106 aa8.77□□□□□ -1.01
RNF40-209ENST00000566703 IGLV5-39A0A0G2JS06 123 aa8.76□□□□□ -1.01
RNF40-209ENST00000566703 FABP9Q0Z7S8 132 aa8.76□□□□□ -1.01
RNF40-209ENST00000566703 COX17Q14061 63 aa8.76□□□□□ -1.01
RNF40-209ENST00000566703 KRTAP13-2Q52LG2 175 aa8.76□□□□□ -1.01
RNF40-209ENST00000566703 ANAPC11Q9NYG5 84 aa8.76□□□□□ -1.01
RNF40-209ENST00000566703 RPL24P83731 157 aaKnown RBP8.75□□□□□ -1.01
RNF40-209ENST00000566703 IGKV2-28A0A075B6P5 120 aa8.74□□□□□ -1.01
RNF40-209ENST00000566703 IGKV2D-28P01615 120 aa8.74□□□□□ -1.01
RNF40-209ENST00000566703 VPREB1P12018 145 aa8.74□□□□□ -1.01
RNF40-209ENST00000566703 PFN2P35080 140 aa8.74□□□□□ -1.01
RNF40-209ENST00000566703 COMMD7Q86VX2 200 aa8.74□□□□□ -1.01
RNF40-209ENST00000566703 SND1-IT1Q9HBX3 110 aa8.74□□□□□ -1.01
RNF40-209ENST00000566703 IGKV2D-26A0A0A0MRZ7 120 aa8.73□□□□□ -1.01
RNF40-209ENST00000566703 ZNF22P17026 224 aaPredicted RBP8.73□□□□□ -1.01
RNF40-209ENST00000566703 SFTA2Q6UW10 78 aa8.73□□□□□ -1.01
RNF40-209ENST00000566703 LINC00304Q8N9R0 145 aa8.73□□□□□ -1.01
RNF40-209ENST00000566703 ERG28Q9UKR5 140 aa8.73□□□□□ -1.01
RNF40-209ENST00000566703 SCO1O75880 301 aa8.72□□□□□ -1.01
RNF40-209ENST00000566703 LINC00614P0C842 121 aa8.72□□□□□ -1.01
RNF40-209ENST00000566703 NDUFA6P56556 154 aa8.72□□□□□ -1.01
RNF40-209ENST00000566703 TMEM126AQ9H061 195 aa8.72□□□□□ -1.01
RNF40-209ENST00000566703 TMA7Q9Y2S6 64 aaKnown RBP8.72□□□□□ -1.01
RNF40-209ENST00000566703 A0A096LNJ9 63 aa8.71□□□□□ -1.02
RNF40-209ENST00000566703 FAM19A1Q7Z5A9 133 aa8.71□□□□□ -1.02
RNF40-209ENST00000566703 RHEBQ15382 184 aa8.7□□□□□ -1.02
RNF40-209ENST00000566703 M0R378 163 aa8.69□□□□□ -1.02
RNF40-209ENST00000566703 HBDP02042 147 aa8.69□□□□□ -1.02
RNF40-209ENST00000566703 PRLHP81277 87 aa8.69□□□□□ -1.02
RNF40-209ENST00000566703 C10orf91Q5T1B1 145 aa8.69□□□□□ -1.02
RNF40-209ENST00000566703 PLEKHB2Q96CS7 222 aa8.69□□□□□ -1.02
RNF40-209ENST00000566703 TMEM238C9JI98 176 aa8.68□□□□□ -1.02
RNF40-209ENST00000566703 TPRXLQ17RH7 258 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms