RNA–Protein interactions for RNA: ENST00000566292.5

USB1-213, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-213ENST00000566292 ALKBH7Q9BT30 221 aaPredicted RBP11.06□□□□□ -0.64
USB1-213ENST00000566292 KRTAP1-4P0C5Y4 121 aa11.05□□□□□ -0.64
USB1-213ENST00000566292 PAPPA-AS1Q5QFB9 102 aa11.05□□□□□ -0.64
USB1-213ENST00000566292 G0S2P27469 103 aa11.04□□□□□ -0.64
USB1-213ENST00000566292 SEC11AP67812 179 aa11.04□□□□□ -0.64
USB1-213ENST00000566292 GEMIN7Q9H840 131 aaKnown RBP11.03□□□□□ -0.64
USB1-213ENST00000566292 TRAV9-1A0A075B6T8 112 aa11.02□□□□□ -0.65
USB1-213ENST00000566292 TMEM218A2RU14 115 aa11.02□□□□□ -0.65
USB1-213ENST00000566292 UQCC3Q6UW78 93 aa11.02□□□□□ -0.65
USB1-213ENST00000566292 ERASQ7Z444 233 aa11.02□□□□□ -0.65
USB1-213ENST00000566292 XAGE1AQ9HD64 81 aa11.02□□□□□ -0.65
USB1-213ENST00000566292 F8VRH5 84 aa11.01□□□□□ -0.65
USB1-213ENST00000566292 SCGB3A1Q96QR1 104 aa11.01□□□□□ -0.65
USB1-213ENST00000566292 C22orf24Q9Y442 160 aa11.01□□□□□ -0.65
USB1-213ENST00000566292 LPAP08519 4548 aa11.01□□□□□ -0.65
USB1-213ENST00000566292 IFITM2Q01629 132 aa11□□□□□ -0.65
USB1-213ENST00000566292 IGLV1-50A0A075B6I6 118 aa10.99□□□□□ -0.65
USB1-213ENST00000566292 LINC01546A6NGU7 62 aa10.99□□□□□ -0.65
USB1-213ENST00000566292 SMIM1B2RUZ4 78 aa10.99□□□□□ -0.65
USB1-213ENST00000566292 GNB1LQ9BYB4 327 aa10.99□□□□□ -0.65
USB1-213ENST00000566292 TINCRA0A1B0GVN0 87 aa10.98□□□□□ -0.65
USB1-213ENST00000566292 IGLV5-45A0A087WSX0 123 aa10.97□□□□□ -0.65
USB1-213ENST00000566292 CXCL5P42830 114 aa10.97□□□□□ -0.65
USB1-213ENST00000566292 SEC11CQ9BY50 192 aa10.97□□□□□ -0.65
USB1-213ENST00000566292 ZNF861PO60384 105 aa10.96□□□□□ -0.65
USB1-213ENST00000566292 PDZD11Q5EBL8 140 aa10.96□□□□□ -0.65
USB1-213ENST00000566292 S100PP25815 95 aa10.95□□□□□ -0.66
USB1-213ENST00000566292 LBHQ53QV2 105 aaPredicted RBP10.95□□□□□ -0.66
USB1-213ENST00000566292 COX7B2Q8TF08 81 aa10.95□□□□□ -0.66
USB1-213ENST00000566292 CST9LQ9H4G1 147 aa10.95□□□□□ -0.66
USB1-213ENST00000566292 NUPR1O60356 82 aa10.94□□□□□ -0.66
USB1-213ENST00000566292 MRPL55Q7Z7F7 128 aaKnown RBP10.94□□□□□ -0.66
USB1-213ENST00000566292 TP73-AS1Q9UF72 201 aa10.94□□□□□ -0.66
USB1-213ENST00000566292 LINC01549A6NIU2 74 aa10.93□□□□□ -0.66
USB1-213ENST00000566292 SPINK8P0C7L1 97 aa10.93□□□□□ -0.66
USB1-213ENST00000566292 PMVKQ15126 192 aa10.92□□□□□ -0.66
USB1-213ENST00000566292 MRPL18Q9H0U6 180 aaKnown RBP10.92□□□□□ -0.66
USB1-213ENST00000566292 RPL13AP40429 203 aaKnown RBP10.91□□□□□ -0.66
USB1-213ENST00000566292 COX19Q49B96 90 aa10.91□□□□□ -0.66
USB1-213ENST00000566292 FA2HQ7L5A8 372 aa10.91□□□□□ -0.66
USB1-213ENST00000566292 CARHSP1Q9Y2V2 147 aaKnown RBP10.91□□□□□ -0.66
USB1-213ENST00000566292 FABP9Q0Z7S8 132 aa10.9□□□□□ -0.66
USB1-213ENST00000566292 COMMD7Q86VX2 200 aa10.9□□□□□ -0.66
USB1-213ENST00000566292 LINC00167Q96N53 147 aa10.9□□□□□ -0.66
USB1-213ENST00000566292 RAB5BP61020 215 aa10.89□□□□□ -0.67
USB1-213ENST00000566292 C10orf91Q5T1B1 145 aa10.89□□□□□ -0.67
USB1-213ENST00000566292 SMCO4Q9NRQ5 59 aa10.89□□□□□ -0.67
USB1-213ENST00000566292 A0A096LNJ9 63 aa10.88□□□□□ -0.67
USB1-213ENST00000566292 RPL37AP8A6NKH3 93 aa10.88□□□□□ -0.67
USB1-213ENST00000566292 BCE1O60756 84 aa10.88□□□□□ -0.67
USB1-213ENST00000566292 IGLV5-37A0A075B6J1 123 aa10.86□□□□□ -0.67
USB1-213ENST00000566292 GAGE10A6NGK3 116 aa10.86□□□□□ -0.67
USB1-213ENST00000566292 IGLC3P0DOY3 106 aa10.86□□□□□ -0.67
USB1-213ENST00000566292 RPL28P46779 137 aaKnown RBP10.86□□□□□ -0.67
USB1-213ENST00000566292 RHEBQ15382 184 aa10.86□□□□□ -0.67
USB1-213ENST00000566292 URB1-AS1Q96HZ7 61 aa10.86□□□□□ -0.67
USB1-213ENST00000566292 RPS10P5Q9NQ39 176 aa10.86□□□□□ -0.67
USB1-213ENST00000566292 IGLV5-39A0A0G2JS06 123 aa10.85□□□□□ -0.67
USB1-213ENST00000566292 H3BRM9 83 aa10.85□□□□□ -0.67
USB1-213ENST00000566292 A0A087X002 238 aa10.84□□□□□ -0.67
USB1-213ENST00000566292 ATP5LO75964 103 aa10.83□□□□□ -0.68
USB1-213ENST00000566292 ZNF22P17026 224 aaPredicted RBP10.83□□□□□ -0.68
USB1-213ENST00000566292 C18orf32Q8TCD1 76 aa10.83□□□□□ -0.68
USB1-213ENST00000566292 SCO1O75880 301 aa10.82□□□□□ -0.68
USB1-213ENST00000566292 NDUFA6P56556 154 aa10.82□□□□□ -0.68
USB1-213ENST00000566292 PRR4Q16378 134 aa10.82□□□□□ -0.68
USB1-213ENST00000566292 KRTAP13-1Q8IUC0 172 aa10.82□□□□□ -0.68
USB1-213ENST00000566292 NKAPP1Q8N9T2 125 aa10.82□□□□□ -0.68
USB1-213ENST00000566292 LINC00614P0C842 121 aa10.81□□□□□ -0.68
USB1-213ENST00000566292 PFN2P35080 140 aa10.81□□□□□ -0.68
USB1-213ENST00000566292 PMCHL1Q16048 86 aa10.81□□□□□ -0.68
USB1-213ENST00000566292 TRAPPC1Q9Y5R8 145 aa10.81□□□□□ -0.68
USB1-213ENST00000566292 HBDP02042 147 aa10.79□□□□□ -0.68
USB1-213ENST00000566292 ANAPC11Q9NYG5 84 aa10.79□□□□□ -0.68
USB1-213ENST00000566292 IGKV2-28A0A075B6P5 120 aa10.78□□□□□ -0.68
USB1-213ENST00000566292 TSPAN13O95857 204 aa10.78□□□□□ -0.68
USB1-213ENST00000566292 IGKV2D-28P01615 120 aa10.78□□□□□ -0.68
USB1-213ENST00000566292 CRYGAP11844 174 aa10.78□□□□□ -0.68
USB1-213ENST00000566292 ERG28Q9UKR5 140 aa10.78□□□□□ -0.68
USB1-213ENST00000566292 C11orf86A6NJI1 115 aa10.77□□□□□ -0.69
USB1-213ENST00000566292 VPREB1P12018 145 aa10.77□□□□□ -0.69
USB1-213ENST00000566292 UBE2AP49459 152 aa10.77□□□□□ -0.69
USB1-213ENST00000566292 SND1-IT1Q9HBX3 110 aa10.77□□□□□ -0.69
USB1-213ENST00000566292 TYMSOSQ8TAI1 123 aa10.76□□□□□ -0.69
USB1-213ENST00000566292 KRTAP13-2Q52LG2 175 aa10.75□□□□□ -0.69
USB1-213ENST00000566292 Q8NDZ9 215 aa10.75□□□□□ -0.69
USB1-213ENST00000566292 ZNF625Q96I27 306 aaPredicted RBP10.75□□□□□ -0.69
USB1-213ENST00000566292 COX17Q14061 63 aa10.74□□□□□ -0.69
USB1-213ENST00000566292 BAGE3Q86Y29 109 aa10.74□□□□□ -0.69
USB1-213ENST00000566292 TMEM170BQ5T4T1 132 aa10.73□□□□□ -0.69
USB1-213ENST00000566292 TMEM238C9JI98 176 aa10.72□□□□□ -0.69
USB1-213ENST00000566292 APOC3P02656 99 aa10.72□□□□□ -0.69
USB1-213ENST00000566292 PRLHP81277 87 aa10.72□□□□□ -0.69
USB1-213ENST00000566292 TMEM126AQ9H061 195 aa10.71□□□□□ -0.69
USB1-213ENST00000566292 RPL24P83731 157 aaKnown RBP10.7□□□□□ -0.7
USB1-213ENST00000566292 FAM229BQ4G0N7 80 aa10.7□□□□□ -0.7
USB1-213ENST00000566292 M0R378 163 aa10.69□□□□□ -0.7
USB1-213ENST00000566292 FAM19A1Q7Z5A9 133 aa10.69□□□□□ -0.7
USB1-213ENST00000566292 CHTOPQ9Y3Y2 248 aaKnown RBP10.69□□□□□ -0.7
USB1-213ENST00000566292 MUC2Q02817 5179 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms