RNA–Protein interactions for RNA: ENST00000565788.1

MAP1LC3B-207, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 2 BASIC

Gene MAP1LC3B, Length 625 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-207ENST00000565788 HERVK_113P63121 156 aa10.54□□□□□ -0.72
MAP1LC3B-207ENST00000565788 C6orf226Q5I0X4 101 aa10.54□□□□□ -0.72
MAP1LC3B-207ENST00000565788 LINC00469Q8N7U9 141 aa10.54□□□□□ -0.72
MAP1LC3B-207ENST00000565788 ALKBH7Q9BT30 221 aaPredicted RBP10.54□□□□□ -0.72
MAP1LC3B-207ENST00000565788 RNF213Q63HN8 5207 aa10.54□□□□□ -0.72
MAP1LC3B-207ENST00000565788 SEC11AP67812 179 aa10.53□□□□□ -0.72
MAP1LC3B-207ENST00000565788 PAPPA-AS1Q5QFB9 102 aa10.53□□□□□ -0.72
MAP1LC3B-207ENST00000565788 TMEM218A2RU14 115 aa10.52□□□□□ -0.73
MAP1LC3B-207ENST00000565788 G0S2P27469 103 aa10.52□□□□□ -0.73
MAP1LC3B-207ENST00000565788 GEMIN7Q9H840 131 aaKnown RBP10.52□□□□□ -0.73
MAP1LC3B-207ENST00000565788 TRAV9-1A0A075B6T8 112 aa10.51□□□□□ -0.73
MAP1LC3B-207ENST00000565788 UQCC3Q6UW78 93 aa10.51□□□□□ -0.73
MAP1LC3B-207ENST00000565788 KRTAP1-4P0C5Y4 121 aa10.5□□□□□ -0.73
MAP1LC3B-207ENST00000565788 ERASQ7Z444 233 aa10.5□□□□□ -0.73
MAP1LC3B-207ENST00000565788 SCGB3A1Q96QR1 104 aa10.5□□□□□ -0.73
MAP1LC3B-207ENST00000565788 XAGE1AQ9HD64 81 aa10.5□□□□□ -0.73
MAP1LC3B-207ENST00000565788 F8VRH5 84 aa10.49□□□□□ -0.73
MAP1LC3B-207ENST00000565788 LCE2AQ5TA79 106 aaPredicted RBP10.49□□□□□ -0.73
MAP1LC3B-207ENST00000565788 C22orf24Q9Y442 160 aa10.49□□□□□ -0.73
MAP1LC3B-207ENST00000565788 LPAP08519 4548 aa10.48□□□□□ -0.73
MAP1LC3B-207ENST00000565788 IFITM2Q01629 132 aa10.48□□□□□ -0.73
MAP1LC3B-207ENST00000565788 SMIM1B2RUZ4 78 aa10.47□□□□□ -0.73
MAP1LC3B-207ENST00000565788 CXCL5P42830 114 aa10.47□□□□□ -0.73
MAP1LC3B-207ENST00000565788 GNB1LQ9BYB4 327 aa10.47□□□□□ -0.73
MAP1LC3B-207ENST00000565788 IGLV1-50A0A075B6I6 118 aa10.46□□□□□ -0.73
MAP1LC3B-207ENST00000565788 TINCRA0A1B0GVN0 87 aa10.46□□□□□ -0.73
MAP1LC3B-207ENST00000565788 LINC01546A6NGU7 62 aa10.46□□□□□ -0.73
MAP1LC3B-207ENST00000565788 S100PP25815 95 aa10.46□□□□□ -0.73
MAP1LC3B-207ENST00000565788 SEC11CQ9BY50 192 aa10.46□□□□□ -0.73
MAP1LC3B-207ENST00000565788 PDZD11Q5EBL8 140 aa10.45□□□□□ -0.74
MAP1LC3B-207ENST00000565788 IGLV5-45A0A087WSX0 123 aa10.44□□□□□ -0.74
MAP1LC3B-207ENST00000565788 NUPR1O60356 82 aa10.44□□□□□ -0.74
MAP1LC3B-207ENST00000565788 LBHQ53QV2 105 aaPredicted RBP10.44□□□□□ -0.74
MAP1LC3B-207ENST00000565788 COX7B2Q8TF08 81 aa10.44□□□□□ -0.74
MAP1LC3B-207ENST00000565788 LINC01549A6NIU2 74 aa10.43□□□□□ -0.74
MAP1LC3B-207ENST00000565788 ZNF861PO60384 105 aa10.43□□□□□ -0.74
MAP1LC3B-207ENST00000565788 CST9LQ9H4G1 147 aa10.43□□□□□ -0.74
MAP1LC3B-207ENST00000565788 SPINK8P0C7L1 97 aa10.42□□□□□ -0.74
MAP1LC3B-207ENST00000565788 FA2HQ7L5A8 372 aa10.42□□□□□ -0.74
MAP1LC3B-207ENST00000565788 MRPL55Q7Z7F7 128 aaKnown RBP10.42□□□□□ -0.74
MAP1LC3B-207ENST00000565788 MRPL18Q9H0U6 180 aaKnown RBP10.42□□□□□ -0.74
MAP1LC3B-207ENST00000565788 TP73-AS1Q9UF72 201 aa10.42□□□□□ -0.74
MAP1LC3B-207ENST00000565788 PMVKQ15126 192 aa10.41□□□□□ -0.74
MAP1LC3B-207ENST00000565788 COX19Q49B96 90 aa10.41□□□□□ -0.74
MAP1LC3B-207ENST00000565788 COMMD7Q86VX2 200 aa10.41□□□□□ -0.74
MAP1LC3B-207ENST00000565788 FABP9Q0Z7S8 132 aa10.4□□□□□ -0.74
MAP1LC3B-207ENST00000565788 SMCO4Q9NRQ5 59 aa10.4□□□□□ -0.74
MAP1LC3B-207ENST00000565788 RPL13AP40429 203 aaKnown RBP10.39□□□□□ -0.75
MAP1LC3B-207ENST00000565788 RAB5BP61020 215 aa10.38□□□□□ -0.75
MAP1LC3B-207ENST00000565788 C10orf91Q5T1B1 145 aa10.38□□□□□ -0.75
MAP1LC3B-207ENST00000565788 LINC00167Q96N53 147 aa10.38□□□□□ -0.75
MAP1LC3B-207ENST00000565788 CARHSP1Q9Y2V2 147 aaKnown RBP10.38□□□□□ -0.75
MAP1LC3B-207ENST00000565788 RPL37AP8A6NKH3 93 aa10.37□□□□□ -0.75
MAP1LC3B-207ENST00000565788 BCE1O60756 84 aa10.37□□□□□ -0.75
MAP1LC3B-207ENST00000565788 RPS10P5Q9NQ39 176 aa10.37□□□□□ -0.75
MAP1LC3B-207ENST00000565788 A0A096LNJ9 63 aa10.36□□□□□ -0.75
MAP1LC3B-207ENST00000565788 RHEBQ15382 184 aa10.36□□□□□ -0.75
MAP1LC3B-207ENST00000565788 GAGE10A6NGK3 116 aa10.35□□□□□ -0.75
MAP1LC3B-207ENST00000565788 H3BRM9 83 aa10.35□□□□□ -0.75
MAP1LC3B-207ENST00000565788 IGLC3P0DOY3 106 aa10.35□□□□□ -0.75
MAP1LC3B-207ENST00000565788 RPL28P46779 137 aaKnown RBP10.35□□□□□ -0.75
MAP1LC3B-207ENST00000565788 URB1-AS1Q96HZ7 61 aa10.35□□□□□ -0.75
MAP1LC3B-207ENST00000565788 IGLV5-37A0A075B6J1 123 aa10.34□□□□□ -0.75
MAP1LC3B-207ENST00000565788 ATP5LO75964 103 aa10.33□□□□□ -0.76
MAP1LC3B-207ENST00000565788 NDUFA6P56556 154 aa10.33□□□□□ -0.76
MAP1LC3B-207ENST00000565788 IGLV5-39A0A0G2JS06 123 aa10.32□□□□□ -0.76
MAP1LC3B-207ENST00000565788 ZNF22P17026 224 aaPredicted RBP10.32□□□□□ -0.76
MAP1LC3B-207ENST00000565788 NKAPP1Q8N9T2 125 aa10.32□□□□□ -0.76
MAP1LC3B-207ENST00000565788 C18orf32Q8TCD1 76 aa10.32□□□□□ -0.76
MAP1LC3B-207ENST00000565788 TRAPPC1Q9Y5R8 145 aa10.32□□□□□ -0.76
MAP1LC3B-207ENST00000565788 A0A087X002 238 aa10.31□□□□□ -0.76
MAP1LC3B-207ENST00000565788 SCO1O75880 301 aa10.31□□□□□ -0.76
MAP1LC3B-207ENST00000565788 PRR4Q16378 134 aa10.31□□□□□ -0.76
MAP1LC3B-207ENST00000565788 HBDP02042 147 aa10.3□□□□□ -0.76
MAP1LC3B-207ENST00000565788 LINC00614P0C842 121 aa10.3□□□□□ -0.76
MAP1LC3B-207ENST00000565788 PFN2P35080 140 aa10.3□□□□□ -0.76
MAP1LC3B-207ENST00000565788 PMCHL1Q16048 86 aa10.3□□□□□ -0.76
MAP1LC3B-207ENST00000565788 KRTAP13-1Q8IUC0 172 aa10.29□□□□□ -0.76
MAP1LC3B-207ENST00000565788 IGKV2-28A0A075B6P5 120 aa10.28□□□□□ -0.76
MAP1LC3B-207ENST00000565788 IGKV2D-28P01615 120 aa10.28□□□□□ -0.76
MAP1LC3B-207ENST00000565788 UBE2AP49459 152 aa10.28□□□□□ -0.76
MAP1LC3B-207ENST00000565788 TSPAN13O95857 204 aa10.27□□□□□ -0.77
MAP1LC3B-207ENST00000565788 CRYGAP11844 174 aa10.27□□□□□ -0.77
MAP1LC3B-207ENST00000565788 ANAPC11Q9NYG5 84 aa10.27□□□□□ -0.77
MAP1LC3B-207ENST00000565788 ERG28Q9UKR5 140 aa10.27□□□□□ -0.77
MAP1LC3B-207ENST00000565788 C11orf86A6NJI1 115 aa10.26□□□□□ -0.77
MAP1LC3B-207ENST00000565788 VPREB1P12018 145 aa10.26□□□□□ -0.77
MAP1LC3B-207ENST00000565788 LCE2CQ5TA81 110 aa10.26□□□□□ -0.77
MAP1LC3B-207ENST00000565788 TYMSOSQ8TAI1 123 aa10.26□□□□□ -0.77
MAP1LC3B-207ENST00000565788 ZNF625Q96I27 306 aaPredicted RBP10.26□□□□□ -0.77
MAP1LC3B-207ENST00000565788 SND1-IT1Q9HBX3 110 aa10.26□□□□□ -0.77
MAP1LC3B-207ENST00000565788 BAGE3Q86Y29 109 aa10.25□□□□□ -0.77
MAP1LC3B-207ENST00000565788 APOC3P02656 99 aa10.24□□□□□ -0.77
MAP1LC3B-207ENST00000565788 KRTAP13-2Q52LG2 175 aa10.23□□□□□ -0.77
MAP1LC3B-207ENST00000565788 TMEM170BQ5T4T1 132 aa10.23□□□□□ -0.77
MAP1LC3B-207ENST00000565788 Q8NDZ9 215 aa10.23□□□□□ -0.77
MAP1LC3B-207ENST00000565788 PRLHP81277 87 aa10.22□□□□□ -0.77
MAP1LC3B-207ENST00000565788 COX17Q14061 63 aa10.22□□□□□ -0.77
MAP1LC3B-207ENST00000565788 TMEM238C9JI98 176 aa10.21□□□□□ -0.77
MAP1LC3B-207ENST00000565788 RPL24P83731 157 aaKnown RBP10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 161.3 ms