RNA–Protein interactions for RNA: ENST00000564252.1

NME3-206, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 599 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-206ENST00000564252 TIMM17AQ99595 171 aa14.27□□□□□ -0.13
NME3-206ENST00000564252 CTDSP1Q9GZU7 261 aa14.27□□□□□ -0.13
NME3-206ENST00000564252 ZNF861PO60384 105 aa14.26□□□□□ -0.13
NME3-206ENST00000564252 RPL13AP40429 203 aaKnown RBP14.26□□□□□ -0.13
NME3-206ENST00000564252 PAPPA-AS1Q5QFB9 102 aa14.26□□□□□ -0.13
NME3-206ENST00000564252 TOMM6Q96B49 74 aa14.26□□□□□ -0.13
NME3-206ENST00000564252 F8VRH5 84 aa14.25□□□□□ -0.13
NME3-206ENST00000564252 NUPR1O60356 82 aa14.24□□□□□ -0.13
NME3-206ENST00000564252 G0S2P27469 103 aa14.24□□□□□ -0.13
NME3-206ENST00000564252 GEMIN7Q9H840 131 aaKnown RBP14.24□□□□□ -0.13
NME3-206ENST00000564252 CARHSP1Q9Y2V2 147 aaKnown RBP14.24□□□□□ -0.13
NME3-206ENST00000564252 LBHQ53QV2 105 aaPredicted RBP14.23□□□□□ -0.13
NME3-206ENST00000564252 RAB14P61106 215 aa14.22□□□□□ -0.13
NME3-206ENST00000564252 KIAA1644Q3SXP7 199 aa14.21□□□□□ -0.13
NME3-206ENST00000564252 TP73-AS1Q9UF72 201 aa14.21□□□□□ -0.13
NME3-206ENST00000564252 CXCL5P42830 114 aa14.2□□□□□ -0.14
NME3-206ENST00000564252 ERASQ7Z444 233 aa14.2□□□□□ -0.14
NME3-206ENST00000564252 SMIM1B2RUZ4 78 aa14.19□□□□□ -0.14
NME3-206ENST00000564252 MRPL55Q7Z7F7 128 aaKnown RBP14.19□□□□□ -0.14
NME3-206ENST00000564252 SCGB3A1Q96QR1 104 aa14.18□□□□□ -0.14
NME3-206ENST00000564252 ADCYAP1P18509 176 aa14.17□□□□□ -0.14
NME3-206ENST00000564252 TINCRA0A1B0GVN0 87 aa14.16□□□□□ -0.14
NME3-206ENST00000564252 PRR4Q16378 134 aa14.16□□□□□ -0.14
NME3-206ENST00000564252 PDZD11Q5EBL8 140 aa14.16□□□□□ -0.14
NME3-206ENST00000564252 IGLV5-45A0A087WSX0 123 aa14.15□□□□□ -0.14
NME3-206ENST00000564252 BCE1O60756 84 aa14.15□□□□□ -0.14
NME3-206ENST00000564252 COX7B2Q8TF08 81 aa14.15□□□□□ -0.14
NME3-206ENST00000564252 CLLU1Q5K131 121 aa14.14□□□□□ -0.15
NME3-206ENST00000564252 TRAV9-1A0A075B6T8 112 aa14.13□□□□□ -0.15
NME3-206ENST00000564252 LINC01546A6NGU7 62 aa14.13□□□□□ -0.15
NME3-206ENST00000564252 RPL28P46779 137 aaKnown RBP14.13□□□□□ -0.15
NME3-206ENST00000564252 LINC00167Q96N53 147 aa14.13□□□□□ -0.15
NME3-206ENST00000564252 MUC2Q02817 5179 aa14.12□□□□□ -0.15
NME3-206ENST00000564252 A0A087X002 238 aa14.11□□□□□ -0.15
NME3-206ENST00000564252 CST9LQ9H4G1 147 aa14.11□□□□□ -0.15
NME3-206ENST00000564252 LINC01549A6NIU2 74 aa14.1□□□□□ -0.15
NME3-206ENST00000564252 RPL37AP8A6NKH3 93 aa14.1□□□□□ -0.15
NME3-206ENST00000564252 SPINK8P0C7L1 97 aa14.09□□□□□ -0.15
NME3-206ENST00000564252 GNB1LQ9BYB4 327 aa14.09□□□□□ -0.15
NME3-206ENST00000564252 IGLV5-37A0A075B6J1 123 aa14.08□□□□□ -0.16
NME3-206ENST00000564252 TMEM218A2RU14 115 aa14.07□□□□□ -0.16
NME3-206ENST00000564252 GAGE10A6NGK3 116 aa14.07□□□□□ -0.16
NME3-206ENST00000564252 TSPAN13O95857 204 aa14.07□□□□□ -0.16
NME3-206ENST00000564252 RAB5BP61020 215 aa14.07□□□□□ -0.16
NME3-206ENST00000564252 UQCC3Q6UW78 93 aa14.07□□□□□ -0.16
NME3-206ENST00000564252 PMVKQ15126 192 aa14.06□□□□□ -0.16
NME3-206ENST00000564252 CRYGAP11844 174 aa14.05□□□□□ -0.16
NME3-206ENST00000564252 KRTAP13-1Q8IUC0 172 aa14.05□□□□□ -0.16
NME3-206ENST00000564252 MRPL18Q9H0U6 180 aaKnown RBP14.04□□□□□ -0.16
NME3-206ENST00000564252 S100PP25815 95 aa14.03□□□□□ -0.16
NME3-206ENST00000564252 TYMSOSQ8TAI1 123 aa14.03□□□□□ -0.16
NME3-206ENST00000564252 FA2HQ7L5A8 372 aa14.02□□□□□ -0.17
NME3-206ENST00000564252 NKAPP1Q8N9T2 125 aa14.02□□□□□ -0.17
NME3-206ENST00000564252 SEC11CQ9BY50 192 aa14.01□□□□□ -0.17
NME3-206ENST00000564252 ANAPC11Q9NYG5 84 aa14.01□□□□□ -0.17
NME3-206ENST00000564252 H3BRM9 83 aa14□□□□□ -0.17
NME3-206ENST00000564252 ATP5LO75964 103 aa14□□□□□ -0.17
NME3-206ENST00000564252 SMCO4Q9NRQ5 59 aa14□□□□□ -0.17
NME3-206ENST00000564252 IGLV5-39A0A0G2JS06 123 aa13.99□□□□□ -0.17
NME3-206ENST00000564252 SCO1O75880 301 aa13.99□□□□□ -0.17
NME3-206ENST00000564252 IGLC3P0DOY3 106 aa13.99□□□□□ -0.17
NME3-206ENST00000564252 UBE2AP49459 152 aa13.99□□□□□ -0.17
NME3-206ENST00000564252 COX19Q49B96 90 aa13.99□□□□□ -0.17
NME3-206ENST00000564252 KRTAP13-2Q52LG2 175 aa13.99□□□□□ -0.17
NME3-206ENST00000564252 IGKV2-28A0A075B6P5 120 aa13.97□□□□□ -0.17
NME3-206ENST00000564252 IGKV2D-28P01615 120 aa13.97□□□□□ -0.17
NME3-206ENST00000564252 FABP9Q0Z7S8 132 aa13.97□□□□□ -0.17
NME3-206ENST00000564252 A0A096LNJ9 63 aa13.96□□□□□ -0.17
NME3-206ENST00000564252 PFN2P35080 140 aa13.96□□□□□ -0.17
NME3-206ENST00000564252 IFITM2Q01629 132 aa13.96□□□□□ -0.17
NME3-206ENST00000564252 ZNF22P17026 224 aaPredicted RBP13.94□□□□□ -0.18
NME3-206ENST00000564252 FAM229BQ4G0N7 80 aa13.94□□□□□ -0.18
NME3-206ENST00000564252 VPREB1P12018 145 aa13.93□□□□□ -0.18
NME3-206ENST00000564252 URB1-AS1Q96HZ7 61 aa13.92□□□□□ -0.18
NME3-206ENST00000564252 SND1-IT1Q9HBX3 110 aa13.92□□□□□ -0.18
NME3-206ENST00000564252 ERG28Q9UKR5 140 aa13.92□□□□□ -0.18
NME3-206ENST00000564252 NDUFA6P56556 154 aa13.91□□□□□ -0.18
NME3-206ENST00000564252 PRLHP81277 87 aa13.9□□□□□ -0.18
NME3-206ENST00000564252 TMEM238C9JI98 176 aa13.89□□□□□ -0.19
NME3-206ENST00000564252 COX17Q14061 63 aa13.89□□□□□ -0.19
NME3-206ENST00000564252 C10orf91Q5T1B1 145 aa13.89□□□□□ -0.19
NME3-206ENST00000564252 TMEM126AQ9H061 195 aa13.89□□□□□ -0.19
NME3-206ENST00000564252 RHEBQ15382 184 aa13.88□□□□□ -0.19
NME3-206ENST00000564252 LINC00304Q8N9R0 145 aa13.88□□□□□ -0.19
NME3-206ENST00000564252 C18orf32Q8TCD1 76 aa13.88□□□□□ -0.19
NME3-206ENST00000564252 LINC00614P0C842 121 aa13.87□□□□□ -0.19
NME3-206ENST00000564252 FAM19A1Q7Z5A9 133 aa13.87□□□□□ -0.19
NME3-206ENST00000564252 COMMD7Q86VX2 200 aa13.87□□□□□ -0.19
NME3-206ENST00000564252 Q8NDZ9 215 aa13.87□□□□□ -0.19
NME3-206ENST00000564252 RPS10P5Q9NQ39 176 aa13.87□□□□□ -0.19
NME3-206ENST00000564252 M0R378 163 aa13.86□□□□□ -0.19
NME3-206ENST00000564252 HBDP02042 147 aa13.86□□□□□ -0.19
NME3-206ENST00000564252 RPL24P83731 157 aaKnown RBP13.86□□□□□ -0.19
NME3-206ENST00000564252 ZNF625Q96I27 306 aaPredicted RBP13.86□□□□□ -0.19
NME3-206ENST00000564252 RETNLBQ9BQ08 111 aa13.86□□□□□ -0.19
NME3-206ENST00000564252 MUC17Q685J3 4493 aa13.86□□□□□ -0.19
NME3-206ENST00000564252 C11orf86A6NJI1 115 aa13.85□□□□□ -0.19
NME3-206ENST00000564252 PMCHL1Q16048 86 aa13.85□□□□□ -0.19
NME3-206ENST00000564252 IGKV2D-26A0A0A0MRZ7 120 aa13.84□□□□□ -0.19
NME3-206ENST00000564252 A0A0U1RQV1 116 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 214.9 ms