RNA–Protein interactions for RNA: ENST00000563590.2

CCDC187-201, Transcript of coiled-coil domain containing 187, humanhuman

TSL 1 (best)

Gene CCDC187, Length 3,543 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187-201ENST00000563590 IGLV1-40P01703 118 aa9.14□□□□□ -0.95
CCDC187-201ENST00000563590 LINC00337Q8N6G1 96 aa9.14□□□□□ -0.95
CCDC187-201ENST00000563590 TMEM258P61165 79 aa9.13□□□□□ -0.95
CCDC187-201ENST00000563590 UNC79Q9P2D8 2635 aa9.13□□□□□ -0.95
CCDC187-201ENST00000563590 CRYGAP11844 174 aa9.13□□□□□ -0.95
CCDC187-201ENST00000563590 FAM19A1Q7Z5A9 133 aa9.13□□□□□ -0.95
CCDC187-201ENST00000563590 NOP10Q9NPE3 64 aaKnown RBP9.13□□□□□ -0.95
CCDC187-201ENST00000563590 LAMTOR3Q9UHA4 124 aa9.13□□□□□ -0.95
CCDC187-201ENST00000563590 IGHV4-31P0DP07 118 aa9.13□□□□□ -0.95
CCDC187-201ENST00000563590 ORMDL1Q9P0S3 153 aa9.12□□□□□ -0.95
CCDC187-201ENST00000563590 COX7B2Q8TF08 81 aa9.11□□□□□ -0.95
CCDC187-201ENST00000563590 SMR3AQ99954 134 aa9.11□□□□□ -0.95
CCDC187-201ENST00000563590 SNURFQ9Y675 71 aa9.11□□□□□ -0.95
CCDC187-201ENST00000563590 TRGV4A0A0C4DH28 118 aa9.11□□□□□ -0.95
CCDC187-201ENST00000563590 HIVEP1P15822 2718 aa9.1□□□□□ -0.95
CCDC187-201ENST00000563590 INSP01308 110 aa9.1□□□□□ -0.95
CCDC187-201ENST00000563590 UBL5Q9BZL1 73 aa9.1□□□□□ -0.95
CCDC187-201ENST00000563590 APCP25054 2843 aa9.1□□□□□ -0.95
CCDC187-201ENST00000563590 XCL1P47992 114 aa9.1□□□□□ -0.95
CCDC187-201ENST00000563590 PRR3P79522 188 aaKnown RBP9.1□□□□□ -0.95
CCDC187-201ENST00000563590 OVOL2Q9BRP0 275 aa9.1□□□□□ -0.95
CCDC187-201ENST00000563590 PF4P02776 101 aa9.09□□□□□ -0.95
CCDC187-201ENST00000563590 Q6ZTI0 123 aa9.09□□□□□ -0.95
CCDC187-201ENST00000563590 C2orf48Q96LS8 159 aa9.09□□□□□ -0.95
CCDC187-201ENST00000563590 RBM3P98179 157 aaKnown RBP9.09□□□□□ -0.95
CCDC187-201ENST00000563590 TMEM86BQ8N661 226 aa9.09□□□□□ -0.95
CCDC187-201ENST00000563590 A0A0U1RQV1 116 aa9.08□□□□□ -0.96
CCDC187-201ENST00000563590 CCL18P55774 89 aa9.08□□□□□ -0.96
CCDC187-201ENST00000563590 LOC100131303A0A0U1RQF7 123 aa9.08□□□□□ -0.96
CCDC187-201ENST00000563590 H0YGX0 51 aa9.08□□□□□ -0.96
CCDC187-201ENST00000563590 J3QLI3 93 aa9.08□□□□□ -0.96
CCDC187-201ENST00000563590 PSMB8P28062 276 aa9.08□□□□□ -0.96
CCDC187-201ENST00000563590 TRAV25A0A0B4J276 109 aa9.07□□□□□ -0.96
CCDC187-201ENST00000563590 SCXQ7RTU7 201 aa9.07□□□□□ -0.96
CCDC187-201ENST00000563590 LINC01561Q8N1V8 128 aa9.07□□□□□ -0.96
CCDC187-201ENST00000563590 UPK3BQ9BT76 320 aa9.07□□□□□ -0.96
CCDC187-201ENST00000563590 FHL2Q14192 279 aa9.07□□□□□ -0.96
CCDC187-201ENST00000563590 Q6JHZ5 121 aa9.06□□□□□ -0.96
CCDC187-201ENST00000563590 FAM236DA0A1B0GTK5 79 aa9.06□□□□□ -0.96
CCDC187-201ENST00000563590 FAM236CP0DP71 79 aa9.06□□□□□ -0.96
CCDC187-201ENST00000563590 S100A7L2Q5SY68 101 aa9.06□□□□□ -0.96
CCDC187-201ENST00000563590 STAB1Q9NY15 2570 aa9.06□□□□□ -0.96
CCDC187-201ENST00000563590 RPL28P46779 137 aaKnown RBP9.05□□□□□ -0.96
CCDC187-201ENST00000563590 FAM222AQ5U5X8 452 aa9.05□□□□□ -0.96
CCDC187-201ENST00000563590 IGLV10-54A0A075B6I4 117 aa9.05□□□□□ -0.96
CCDC187-201ENST00000563590 K7EQD1 137 aa9.04□□□□□ -0.96
CCDC187-201ENST00000563590 CCL24O00175 119 aa9.04□□□□□ -0.96
CCDC187-201ENST00000563590 MRAPQ8TCY5 172 aa9.04□□□□□ -0.96
CCDC187-201ENST00000563590 IGLV5-39A0A0G2JS06 123 aa9.03□□□□□ -0.96
CCDC187-201ENST00000563590 BRK1Q8WUW1 75 aa9.03□□□□□ -0.96
CCDC187-201ENST00000563590 IGKV2-28A0A075B6P5 120 aa9.03□□□□□ -0.96
CCDC187-201ENST00000563590 IGLV5-45A0A087WSX0 123 aa9.03□□□□□ -0.96
CCDC187-201ENST00000563590 OXTP01178 125 aa9.03□□□□□ -0.96
CCDC187-201ENST00000563590 IGKV2D-28P01615 120 aa9.03□□□□□ -0.96
CCDC187-201ENST00000563590 CDC42SE2Q9NRR3 84 aa9.03□□□□□ -0.96
CCDC187-201ENST00000563590 MAP6D1Q9H9H5 199 aa9.02□□□□□ -0.96
CCDC187-201ENST00000563590 ZNF702PQ9H963 129 aa9.02□□□□□ -0.97
CCDC187-201ENST00000563590 C22orf24Q9Y442 160 aa9.02□□□□□ -0.97
CCDC187-201ENST00000563590 RPS28P62857 69 aaKnown RBP9.02□□□□□ -0.97
CCDC187-201ENST00000563590 BEAN1Q3B7T3 259 aa9.02□□□□□ -0.97
CCDC187-201ENST00000563590 MPLKIPQ8TAP9 179 aa9.02□□□□□ -0.97
CCDC187-201ENST00000563590 NTM-AS1Q6ZSK4 140 aa9.01□□□□□ -0.97
CCDC187-201ENST00000563590 A8MTW9 85 aa9.01□□□□□ -0.97
CCDC187-201ENST00000563590 TENM4Q6N022 2769 aa9.01□□□□□ -0.97
CCDC187-201ENST00000563590 COL6A5A8TX70 2615 aa9□□□□□ -0.97
CCDC187-201ENST00000563590 DAD1P61803 113 aa9□□□□□ -0.97
CCDC187-201ENST00000563590 LINC00482Q8N8I6 264 aa9□□□□□ -0.97
CCDC187-201ENST00000563590 Q6YL49 198 aa8.99□□□□□ -0.97
CCDC187-201ENST00000563590 IGLV4-60A0A075B6I1 120 aa8.99□□□□□ -0.97
CCDC187-201ENST00000563590 DNAJC9-AS1A6NH13 148 aa8.99□□□□□ -0.97
CCDC187-201ENST00000563590 RMI2Q96E14 147 aa8.98□□□□□ -0.97
CCDC187-201ENST00000563590 CCKP06307 115 aa8.98□□□□□ -0.97
CCDC187-201ENST00000563590 NBPF19A0A087WUL8 3843 aa8.98□□□□□ -0.97
CCDC187-201ENST00000563590 PRB2P02812 416 aaPredicted RBP8.98□□□□□ -0.97
CCDC187-201ENST00000563590 C6orf99Q4VX62 202 aa8.97□□□□□ -0.97
CCDC187-201ENST00000563590 C11orf72Q8NBR9 251 aa8.97□□□□□ -0.97
CCDC187-201ENST00000563590 F8WEM9 126 aa8.97□□□□□ -0.97
CCDC187-201ENST00000563590 JMJD7-PLA2G4BH0Y9G9 81 aa8.97□□□□□ -0.97
CCDC187-201ENST00000563590 DEFB114Q30KQ6 69 aa8.97□□□□□ -0.97
CCDC187-201ENST00000563590 TMEM89A2RUT3 159 aa8.96□□□□□ -0.97
CCDC187-201ENST00000563590 NDUFC2O95298 119 aa8.96□□□□□ -0.97
CCDC187-201ENST00000563590 C9orf116Q5BN46 136 aaPredicted RBP8.96□□□□□ -0.98
CCDC187-201ENST00000563590 TMEM256-PLSCR3K7ERE1 68 aa8.95□□□□□ -0.98
CCDC187-201ENST00000563590 INAFM1C9JVW0 142 aa8.94□□□□□ -0.98
CCDC187-201ENST00000563590 LINC00336Q6ZUF6 198 aa8.94□□□□□ -0.98
CCDC187-201ENST00000563590 PDZD2O15018 2839 aa8.94□□□□□ -0.98
CCDC187-201ENST00000563590 ODF3L2Q3SX64 289 aa8.94□□□□□ -0.98
CCDC187-201ENST00000563590 SS18Q15532 418 aa8.93□□□□□ -0.98
CCDC187-201ENST00000563590 IBA57-AS1B1ANH7 110 aa8.93□□□□□ -0.98
CCDC187-201ENST00000563590 DEFB135Q30KP9 77 aa8.93□□□□□ -0.98
CCDC187-201ENST00000563590 LINC00269Q8N2A0 174 aa8.93□□□□□ -0.98
CCDC187-201ENST00000563590 NSD1Q96L73 2696 aaPredicted RBP8.92□□□□□ -0.98
CCDC187-201ENST00000563590 A0A096LNT2 108 aa8.92□□□□□ -0.98
CCDC187-201ENST00000563590 TRBV6-4A0A1B0GX49 114 aa8.92□□□□□ -0.98
CCDC187-201ENST00000563590 LY6G6DO95868 133 aa8.92□□□□□ -0.98
CCDC187-201ENST00000563590 Q8N814 137 aa8.92□□□□□ -0.98
CCDC187-201ENST00000563590 Q5XG85 94 aa8.91□□□□□ -0.98
CCDC187-201ENST00000563590 TRAV10A0A0B4J240 114 aa8.91□□□□□ -0.98
CCDC187-201ENST00000563590 TRBV10-1A0A0K0K1A3 114 aa8.91□□□□□ -0.98
CCDC187-201ENST00000563590 C1orf158Q8N1D5 194 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms