RNA–Protein interactions for RNA: ENST00000563396.1

SMPD3-204, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 3

Gene SMPD3, Length 608 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-204ENST00000563396 FAM168BA1KXE4 195 aa8.64□□□□□ -1.03
SMPD3-204ENST00000563396 KRTAP7-1Q8IUC3 87 aa8.64□□□□□ -1.03
SMPD3-204ENST00000563396 PACRGQ96M98 296 aaPredicted RBP8.64□□□□□ -1.03
SMPD3-204ENST00000563396 CDKN2A-AS1Q9UH64 79 aa8.64□□□□□ -1.03
SMPD3-204ENST00000563396 IGLV5-45A0A087WSX0 123 aa8.63□□□□□ -1.03
SMPD3-204ENST00000563396 MRPL18Q9H0U6 180 aaKnown RBP8.63□□□□□ -1.03
SMPD3-204ENST00000563396 PRSS2P07478 247 aa8.62□□□□□ -1.03
SMPD3-204ENST00000563396 GAGE2EQ4V326 116 aa8.62□□□□□ -1.03
SMPD3-204ENST00000563396 C9orf129Q5T035 196 aaKnown RBP8.62□□□□□ -1.03
SMPD3-204ENST00000563396 SCGB3A1Q96QR1 104 aa8.62□□□□□ -1.03
SMPD3-204ENST00000563396 RPS10P5Q9NQ39 176 aa8.62□□□□□ -1.03
SMPD3-204ENST00000563396 GAGE2DQ9UEU5 116 aa8.62□□□□□ -1.03
SMPD3-204ENST00000563396 TINCRA0A1B0GVN0 87 aa8.61□□□□□ -1.03
SMPD3-204ENST00000563396 SMIM1B2RUZ4 78 aa8.61□□□□□ -1.03
SMPD3-204ENST00000563396 CXCL5P42830 114 aa8.61□□□□□ -1.03
SMPD3-204ENST00000563396 ODF1Q14990 250 aa8.61□□□□□ -1.03
SMPD3-204ENST00000563396 FAM19A5Q7Z5A7 132 aaPredicted RBP8.61□□□□□ -1.03
SMPD3-204ENST00000563396 KRTAP11-1Q8IUC1 163 aa8.61□□□□□ -1.03
SMPD3-204ENST00000563396 GEMIN7Q9H840 131 aaKnown RBP8.61□□□□□ -1.03
SMPD3-204ENST00000563396 TOMM7Q9P0U1 55 aa8.61□□□□□ -1.03
SMPD3-204ENST00000563396 F8VRH5 84 aa8.6□□□□□ -1.03
SMPD3-204ENST00000563396 M0QXV9 152 aa8.6□□□□□ -1.03
SMPD3-204ENST00000563396 KRTAP10-8P60410 259 aa8.6□□□□□ -1.03
SMPD3-204ENST00000563396 CKS1BP61024 79 aa8.6□□□□□ -1.03
SMPD3-204ENST00000563396 C1orf137Q5JT78 98 aa8.6□□□□□ -1.03
SMPD3-204ENST00000563396 A0A096LNJ9 63 aa8.59□□□□□ -1.03
SMPD3-204ENST00000563396 FABP9Q0Z7S8 132 aa8.59□□□□□ -1.03
SMPD3-204ENST00000563396 C6orf226Q5I0X4 101 aa8.59□□□□□ -1.03
SMPD3-204ENST00000563396 FA2HQ7L5A8 372 aa8.59□□□□□ -1.03
SMPD3-204ENST00000563396 LINC00469Q8N7U9 141 aa8.59□□□□□ -1.03
SMPD3-204ENST00000563396 UBR4Q5T4S7 5183 aa8.58□□□□□ -1.04
SMPD3-204ENST00000563396 IGLV7-43P04211 117 aa8.58□□□□□ -1.04
SMPD3-204ENST00000563396 PMVKQ15126 192 aa8.58□□□□□ -1.04
SMPD3-204ENST00000563396 PDZD11Q5EBL8 140 aa8.58□□□□□ -1.04
SMPD3-204ENST00000563396 URB1-AS1Q96HZ7 61 aa8.58□□□□□ -1.04
SMPD3-204ENST00000563396 CST9LQ9H4G1 147 aa8.58□□□□□ -1.04
SMPD3-204ENST00000563396 SMCO4Q9NRQ5 59 aa8.58□□□□□ -1.04
SMPD3-204ENST00000563396 C18orf32Q8TCD1 76 aa8.57□□□□□ -1.04
SMPD3-204ENST00000563396 SVBPQ8N300 66 aa8.55□□□□□ -1.04
SMPD3-204ENST00000563396 COX7B2Q8TF08 81 aa8.55□□□□□ -1.04
SMPD3-204ENST00000563396 DIRC1Q969H9 104 aa8.55□□□□□ -1.04
SMPD3-204ENST00000563396 H0Y9J4 135 aa8.54□□□□□ -1.04
SMPD3-204ENST00000563396 SNAPINO95295 136 aa8.54□□□□□ -1.04
SMPD3-204ENST00000563396 APOC3P02656 99 aa8.54□□□□□ -1.04
SMPD3-204ENST00000563396 IGLC3P0DOY3 106 aa8.54□□□□□ -1.04
SMPD3-204ENST00000563396 TRAPPC1Q9Y5R8 145 aa8.54□□□□□ -1.04
SMPD3-204ENST00000563396 HBDP02042 147 aa8.53□□□□□ -1.04
SMPD3-204ENST00000563396 UBE2BP63146 152 aa8.53□□□□□ -1.04
SMPD3-204ENST00000563396 NDUFA5Q16718 116 aa8.53□□□□□ -1.04
SMPD3-204ENST00000563396 YPEL4Q96NS1 127 aa8.53□□□□□ -1.04
SMPD3-204ENST00000563396 XAGE1AQ9HD64 81 aa8.53□□□□□ -1.04
SMPD3-204ENST00000563396 TP73-AS1Q9UF72 201 aa8.53□□□□□ -1.04
SMPD3-204ENST00000563396 IGLV5-39A0A0G2JS06 123 aa8.52□□□□□ -1.05
SMPD3-204ENST00000563396 SPINK8P0C7L1 97 aa8.52□□□□□ -1.05
SMPD3-204ENST00000563396 LINC00614P0C842 121 aa8.52□□□□□ -1.05
SMPD3-204ENST00000563396 H3BRM9 83 aa8.51□□□□□ -1.05
SMPD3-204ENST00000563396 C22orf24Q9Y442 160 aa8.51□□□□□ -1.05
SMPD3-204ENST00000563396 LRP2P98164 4655 aa8.51□□□□□ -1.05
SMPD3-204ENST00000563396 NUPR1O60356 82 aa8.5□□□□□ -1.05
SMPD3-204ENST00000563396 KRTAP1-4P0C5Y4 121 aa8.5□□□□□ -1.05
SMPD3-204ENST00000563396 ZNF22P17026 224 aaPredicted RBP8.5□□□□□ -1.05
SMPD3-204ENST00000563396 RAB5BP61020 215 aa8.49□□□□□ -1.05
SMPD3-204ENST00000563396 LBHQ53QV2 105 aaPredicted RBP8.49□□□□□ -1.05
SMPD3-204ENST00000563396 MRPL55Q7Z7F7 128 aaKnown RBP8.49□□□□□ -1.05
SMPD3-204ENST00000563396 IGLV5-37A0A075B6J1 123 aa8.48□□□□□ -1.05
SMPD3-204ENST00000563396 ATP5LO75964 103 aa8.48□□□□□ -1.05
SMPD3-204ENST00000563396 PMCHL1Q16048 86 aa8.48□□□□□ -1.05
SMPD3-204ENST00000563396 IGLV1-50A0A075B6I6 118 aa8.47□□□□□ -1.05
SMPD3-204ENST00000563396 ZNF861PO60384 105 aa8.46□□□□□ -1.06
SMPD3-204ENST00000563396 PRR26Q8N8Z3 221 aa8.46□□□□□ -1.06
SMPD3-204ENST00000563396 C11orf86A6NJI1 115 aa8.45□□□□□ -1.06
SMPD3-204ENST00000563396 CHCHD1Q96BP2 118 aaKnown RBP8.45□□□□□ -1.06
SMPD3-204ENST00000563396 NDUFA6P56556 154 aa8.44□□□□□ -1.06
SMPD3-204ENST00000563396 SFTA2Q6UW10 78 aa8.44□□□□□ -1.06
SMPD3-204ENST00000563396 TMEM238LA0A1B0GVL6 79 aa8.43□□□□□ -1.06
SMPD3-204ENST00000563396 BCE1O60756 84 aa8.43□□□□□ -1.06
SMPD3-204ENST00000563396 COX17Q14061 63 aa8.43□□□□□ -1.06
SMPD3-204ENST00000563396 BAGE3Q86Y29 109 aa8.43□□□□□ -1.06
SMPD3-204ENST00000563396 LINC00167Q96N53 147 aa8.43□□□□□ -1.06
SMPD3-204ENST00000563396 TRAV12-1A0A0B4J245 112 aa8.42□□□□□ -1.06
SMPD3-204ENST00000563396 GHRHP01286 108 aa8.42□□□□□ -1.06
SMPD3-204ENST00000563396 ERG28Q9UKR5 140 aa8.42□□□□□ -1.06
SMPD3-204ENST00000563396 RPL13AP40429 203 aaKnown RBP8.41□□□□□ -1.06
SMPD3-204ENST00000563396 KRTAP13-1Q8IUC0 172 aa8.41□□□□□ -1.06
SMPD3-204ENST00000563396 CBLN2Q8IUK8 224 aa8.41□□□□□ -1.06
SMPD3-204ENST00000563396 ZNF625Q96I27 306 aaPredicted RBP8.41□□□□□ -1.06
SMPD3-204ENST00000563396 CHTOPQ9Y3Y2 248 aaKnown RBP8.41□□□□□ -1.06
SMPD3-204ENST00000563396 VPREB1P12018 145 aa8.4□□□□□ -1.06
SMPD3-204ENST00000563396 RPL28P46779 137 aaKnown RBP8.4□□□□□ -1.06
SMPD3-204ENST00000563396 TMEM170BQ5T4T1 132 aa8.4□□□□□ -1.06
SMPD3-204ENST00000563396 NKAPP1Q8N9T2 125 aa8.4□□□□□ -1.06
SMPD3-204ENST00000563396 SND1-IT1Q9HBX3 110 aa8.4□□□□□ -1.06
SMPD3-204ENST00000563396 PFN2P35080 140 aa8.39□□□□□ -1.07
SMPD3-204ENST00000563396 IFI27L1Q96BM0 104 aa8.39□□□□□ -1.07
SMPD3-204ENST00000563396 TMEM223A0PJW6 202 aa8.38□□□□□ -1.07
SMPD3-204ENST00000563396 RPL37AP8A6NKH3 93 aa8.38□□□□□ -1.07
SMPD3-204ENST00000563396 GAGE10A6NGK3 116 aa8.37□□□□□ -1.07
SMPD3-204ENST00000563396 HSBP1O75506 76 aa8.36□□□□□ -1.07
SMPD3-204ENST00000563396 LINC00310P59036 64 aa8.36□□□□□ -1.07
SMPD3-204ENST00000563396 LCE2CQ5TA81 110 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms