RNA–Protein interactions for RNA: ENST00000561947.5

SMG1-205, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 2,664 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-205ENST00000561947 M0QXV9 152 aa6.72□□□□□ -1.33
SMG1-205ENST00000561947 SLC25A20O43772 301 aa6.72□□□□□ -1.33
SMG1-205ENST00000561947 LINC00158P58513 81 aa6.72□□□□□ -1.33
SMG1-205ENST00000561947 LINC01620Q4KN68 170 aa6.72□□□□□ -1.33
SMG1-205ENST00000561947 C6orf226Q5I0X4 101 aa6.72□□□□□ -1.33
SMG1-205ENST00000561947 CHCHD10Q8WYQ3 142 aaPredicted RBP6.72□□□□□ -1.33
SMG1-205ENST00000561947 TEN1Q86WV5 123 aa6.72□□□□□ -1.33
SMG1-205ENST00000561947 COX7A2LO14548 114 aa6.71□□□□□ -1.34
SMG1-205ENST00000561947 FOXI1Q12951 378 aa6.71□□□□□ -1.34
SMG1-205ENST00000561947 C11orf68Q9H3H3 251 aaKnown RBP6.71□□□□□ -1.34
SMG1-205ENST00000561947 ANK2Q01484 3957 aa6.71□□□□□ -1.34
SMG1-205ENST00000561947 ANKRD29Q8N6D5 301 aa6.7□□□□□ -1.34
SMG1-205ENST00000561947 CLEC2BQ92478 149 aa6.7□□□□□ -1.34
SMG1-205ENST00000561947 FBN1P35555 2871 aaKnown RBP6.7□□□□□ -1.34
SMG1-205ENST00000561947 IGLV10-54A0A075B6I4 117 aa6.7□□□□□ -1.34
SMG1-205ENST00000561947 H3BNG1 76 aa6.7□□□□□ -1.34
SMG1-205ENST00000561947 PFN2P35080 140 aa6.7□□□□□ -1.34
SMG1-205ENST00000561947 LYPD5Q6UWN5 251 aa6.7□□□□□ -1.34
SMG1-205ENST00000561947 PPDPFLQ8WWR9 84 aa6.7□□□□□ -1.34
SMG1-205ENST00000561947 SND1-IT1Q9HBX3 110 aa6.7□□□□□ -1.34
SMG1-205ENST00000561947 TRBV10-2A0A0K0K1G8 114 aa6.69□□□□□ -1.34
SMG1-205ENST00000561947 LST1O00453 97 aa6.69□□□□□ -1.34
SMG1-205ENST00000561947 CCL18P55774 89 aa6.69□□□□□ -1.34
SMG1-205ENST00000561947 LINC01600Q96MT4 127 aa6.69□□□□□ -1.34
SMG1-205ENST00000561947 TRAV13-2A0A0B4J235 113 aa6.69□□□□□ -1.34
SMG1-205ENST00000561947 KIAA0087Q14695 138 aa6.69□□□□□ -1.34
SMG1-205ENST00000561947 CARD19Q96LW7 228 aa6.69□□□□□ -1.34
SMG1-205ENST00000561947 CRPP02741 224 aa6.68□□□□□ -1.34
SMG1-205ENST00000561947 MALP21145 153 aa6.68□□□□□ -1.34
SMG1-205ENST00000561947 C2orf82Q6UX34 121 aa6.68□□□□□ -1.34
SMG1-205ENST00000561947 Q6ZTC4 211 aa6.68□□□□□ -1.34
SMG1-205ENST00000561947 IGKV2-28A0A075B6P5 120 aa6.68□□□□□ -1.34
SMG1-205ENST00000561947 CYSRT1A8MQ03 144 aa6.68□□□□□ -1.34
SMG1-205ENST00000561947 IGKV2D-28P01615 120 aa6.68□□□□□ -1.34
SMG1-205ENST00000561947 CXCL5P42830 114 aa6.68□□□□□ -1.34
SMG1-205ENST00000561947 CKS1BP61024 79 aa6.68□□□□□ -1.34
SMG1-205ENST00000561947 KPRPQ5T749 579 aaPredicted RBP6.68□□□□□ -1.34
SMG1-205ENST00000561947 PRR34Q9NV39 138 aa6.68□□□□□ -1.34
SMG1-205ENST00000561947 LINC00337Q8N6G1 96 aa6.67□□□□□ -1.34
SMG1-205ENST00000561947 KLK12Q9UKR0 248 aa6.67□□□□□ -1.34
SMG1-205ENST00000561947 GAGE12HA6NDE8 117 aa6.67□□□□□ -1.34
SMG1-205ENST00000561947 A0A0J9YWU9 116 aa6.66□□□□□ -1.34
SMG1-205ENST00000561947 STAB1Q9NY15 2570 aa6.66□□□□□ -1.34
SMG1-205ENST00000561947 H3BT86 120 aa6.66□□□□□ -1.34
SMG1-205ENST00000561947 ENHOQ6UWT2 76 aa6.66□□□□□ -1.34
SMG1-205ENST00000561947 SPATA25Q9BR10 227 aa6.66□□□□□ -1.34
SMG1-205ENST00000561947 RPL28P46779 137 aaKnown RBP6.65□□□□□ -1.34
SMG1-205ENST00000561947 PCP4P48539 62 aa6.65□□□□□ -1.34
SMG1-205ENST00000561947 KLK5Q9Y337 293 aaPredicted RBP6.65□□□□□ -1.35
SMG1-205ENST00000561947 NANOS2P60321 138 aaKnown RBP6.64□□□□□ -1.35
SMG1-205ENST00000561947 COX17Q14061 63 aa6.64□□□□□ -1.35
SMG1-205ENST00000561947 WFDC10BQ8IUB3 73 aa6.64□□□□□ -1.35
SMG1-205ENST00000561947 NTN5Q8WTR8 489 aaPredicted RBP6.64□□□□□ -1.35
SMG1-205ENST00000561947 C11orf45Q8TAV5 145 aa6.64□□□□□ -1.35
SMG1-205ENST00000561947 SPAG11BQ08648 103 aa6.63□□□□□ -1.35
SMG1-205ENST00000561947 TRAV8-4A0A0B4J246 113 aa6.63□□□□□ -1.35
SMG1-205ENST00000561947 UBE2WQ96B02 151 aa6.63□□□□□ -1.35
SMG1-205ENST00000561947 PKD1L1Q8TDX9 2849 aa6.63□□□□□ -1.35
SMG1-205ENST00000561947 DEFB131BA0A096LNP1 70 aa6.63□□□□□ -1.35
SMG1-205ENST00000561947 TRACP01848 142 aa6.62□□□□□ -1.35
SMG1-205ENST00000561947 SMIM11BQ8TCY0 68 aa6.62□□□□□ -1.35
SMG1-205ENST00000561947 ESRGQ1W209 222 aa6.62□□□□□ -1.35
SMG1-205ENST00000561947 SIGMAR1Q99720 223 aa6.62□□□□□ -1.35
SMG1-205ENST00000561947 C9orf116Q5BN46 136 aaPredicted RBP6.61□□□□□ -1.35
SMG1-205ENST00000561947 C6orf223Q8N319 242 aa6.61□□□□□ -1.35
SMG1-205ENST00000561947 FAM218AQ96MZ4 157 aa6.61□□□□□ -1.35
SMG1-205ENST00000561947 CDIP1Q9H305 208 aa6.61□□□□□ -1.35
SMG1-205ENST00000561947 MAST4O15021 2626 aa6.61□□□□□ -1.35
SMG1-205ENST00000561947 TEX49A0A1B0GTD5 131 aa6.61□□□□□ -1.35
SMG1-205ENST00000561947 NDUFC2O95298 119 aa6.6□□□□□ -1.35
SMG1-205ENST00000561947 PRB2P02812 416 aaPredicted RBP6.6□□□□□ -1.35
SMG1-205ENST00000561947 C10orf25Q5T742 122 aa6.6□□□□□ -1.35
SMG1-205ENST00000561947 UNQ6190/PRO20217Q6UXQ8 127 aa6.6□□□□□ -1.35
SMG1-205ENST00000561947 OR13C6PQ8NH95 151 aa6.6□□□□□ -1.35
SMG1-205ENST00000561947 BAHCC1Q9P281 2608 aa6.59□□□□□ -1.35
SMG1-205ENST00000561947 MUC7Q8TAX7 377 aa6.59□□□□□ -1.35
SMG1-205ENST00000561947 LINC00526Q96FQ7 95 aa6.59□□□□□ -1.35
SMG1-205ENST00000561947 TM2D3Q9BRN9 247 aa6.59□□□□□ -1.35
SMG1-205ENST00000561947 TENM3Q9P273 2699 aa6.59□□□□□ -1.35
SMG1-205ENST00000561947 HUWE1Q7Z6Z7 4374 aaKnown RBP6.59□□□□□ -1.35
SMG1-205ENST00000561947 K7EIL1 84 aa6.59□□□□□ -1.35
SMG1-205ENST00000561947 H0YGX0 51 aa6.58□□□□□ -1.36
SMG1-205ENST00000561947 KRTAP26-1Q6PEX3 210 aa6.58□□□□□ -1.36
SMG1-205ENST00000561947 GVQW2A0A096LPI5 108 aaPredicted RBP6.58□□□□□ -1.36
SMG1-205ENST00000561947 LINC01556Q5JQF7 62 aa6.58□□□□□ -1.36
SMG1-205ENST00000561947 TRAV10A0A0B4J240 114 aa6.57□□□□□ -1.36
SMG1-205ENST00000561947 DEFB121Q5J5C9 76 aa6.57□□□□□ -1.36
SMG1-205ENST00000561947 BAALC-AS2P0C853 105 aa6.57□□□□□ -1.36
SMG1-205ENST00000561947 PRR3P79522 188 aaKnown RBP6.57□□□□□ -1.36
SMG1-205ENST00000561947 A0A087WYN8 130 aa6.56□□□□□ -1.36
SMG1-205ENST00000561947 C6orf48Q9UBA6 75 aa6.56□□□□□ -1.36
SMG1-205ENST00000561947 Q8NDZ9 215 aa6.56□□□□□ -1.36
SMG1-205ENST00000561947 MRAPQ8TCY5 172 aa6.56□□□□□ -1.36
SMG1-205ENST00000561947 Q9HAA7 133 aa6.56□□□□□ -1.36
SMG1-205ENST00000561947 C15orf53Q8NAA6 179 aa6.55□□□□□ -1.36
SMG1-205ENST00000561947 TMEM126AQ9H061 195 aa6.55□□□□□ -1.36
SMG1-205ENST00000561947 COL6A5A8TX70 2615 aa6.55□□□□□ -1.36
SMG1-205ENST00000561947 NCR3O14931 201 aa6.55□□□□□ -1.36
SMG1-205ENST00000561947 DNAL4O96015 105 aa6.55□□□□□ -1.36
SMG1-205ENST00000561947 XGP55808 180 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms