RNA–Protein interactions for RNA: ENST00000561945.1

SPG7-205, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 411 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-205ENST00000561945 FABP9Q0Z7S8 132 aa8.7□□□□□ -1.02
SPG7-205ENST00000561945 ORMDL2Q53FV1 153 aa8.7□□□□□ -1.02
SPG7-205ENST00000561945 C2orf82Q6UX34 121 aa8.7□□□□□ -1.02
SPG7-205ENST00000561945 AMELXQ99217 191 aa8.69□□□□□ -1.02
SPG7-205ENST00000561945 MRPL18Q9H0U6 180 aaKnown RBP8.69□□□□□ -1.02
SPG7-205ENST00000561945 UBE2BP63146 152 aa8.68□□□□□ -1.02
SPG7-205ENST00000561945 TEX43Q6ZNM6 134 aa8.68□□□□□ -1.02
SPG7-205ENST00000561945 LINC00173Q6ZV60 143 aa8.68□□□□□ -1.02
SPG7-205ENST00000561945 CYSLTR1Q9Y271 337 aa8.68□□□□□ -1.02
SPG7-205ENST00000561945 ZNF861PO60384 105 aa8.67□□□□□ -1.02
SPG7-205ENST00000561945 PACRGQ96M98 296 aaPredicted RBP8.67□□□□□ -1.02
SPG7-205ENST00000561945 ALKBH7Q9BT30 221 aaPredicted RBP8.67□□□□□ -1.02
SPG7-205ENST00000561945 TRAPPC1Q9Y5R8 145 aa8.67□□□□□ -1.02
SPG7-205ENST00000561945 NUPR1O60356 82 aa8.66□□□□□ -1.02
SPG7-205ENST00000561945 Q8IZM0 81 aa8.66□□□□□ -1.02
SPG7-205ENST00000561945 SLC7A5P1Q8MH63 180 aa8.66□□□□□ -1.02
SPG7-205ENST00000561945 IGIPA6NJ69 53 aa8.65□□□□□ -1.02
SPG7-205ENST00000561945 C2orf66Q6UXQ4 117 aa8.65□□□□□ -1.02
SPG7-205ENST00000561945 Q6ZN92 141 aa8.65□□□□□ -1.02
SPG7-205ENST00000561945 C2orf88Q9BSF0 95 aa8.65□□□□□ -1.02
SPG7-205ENST00000561945 LINC01549A6NIU2 74 aa8.64□□□□□ -1.03
SPG7-205ENST00000561945 SMCO4Q9NRQ5 59 aa8.64□□□□□ -1.03
SPG7-205ENST00000561945 PAPPA-AS1Q5QFB9 102 aa8.63□□□□□ -1.03
SPG7-205ENST00000561945 FA2HQ7L5A8 372 aa8.63□□□□□ -1.03
SPG7-205ENST00000561945 TP73-AS1Q9UF72 201 aa8.63□□□□□ -1.03
SPG7-205ENST00000561945 C22orf24Q9Y442 160 aa8.63□□□□□ -1.03
SPG7-205ENST00000561945 ZC2HC1BQ5TFG8 222 aa8.62□□□□□ -1.03
SPG7-205ENST00000561945 VCX2Q9H322 139 aa8.62□□□□□ -1.03
SPG7-205ENST00000561945 PRSS2P07478 247 aa8.61□□□□□ -1.03
SPG7-205ENST00000561945 CKS1BP61024 79 aa8.61□□□□□ -1.03
SPG7-205ENST00000561945 LBHQ53QV2 105 aaPredicted RBP8.61□□□□□ -1.03
SPG7-205ENST00000561945 TOMM6Q96B49 74 aa8.61□□□□□ -1.03
SPG7-205ENST00000561945 F8VRH5 84 aa8.6□□□□□ -1.03
SPG7-205ENST00000561945 HERVK_113P63121 156 aa8.6□□□□□ -1.03
SPG7-205ENST00000561945 SEC11AP67812 179 aa8.6□□□□□ -1.03
SPG7-205ENST00000561945 C6orf226Q5I0X4 101 aa8.6□□□□□ -1.03
SPG7-205ENST00000561945 MUC17Q685J3 4493 aa8.59□□□□□ -1.03
SPG7-205ENST00000561945 LINC01546A6NGU7 62 aa8.59□□□□□ -1.03
SPG7-205ENST00000561945 RAB5BP61020 215 aa8.59□□□□□ -1.03
SPG7-205ENST00000561945 PRR4Q16378 134 aa8.59□□□□□ -1.03
SPG7-205ENST00000561945 ERASQ7Z444 233 aa8.59□□□□□ -1.03
SPG7-205ENST00000561945 SCGB3A1Q96QR1 104 aa8.59□□□□□ -1.03
SPG7-205ENST00000561945 TIMM17AQ99595 171 aa8.59□□□□□ -1.03
SPG7-205ENST00000561945 CDKN2A-AS1Q9UH64 79 aa8.59□□□□□ -1.03
SPG7-205ENST00000561945 BCE1O60756 84 aa8.58□□□□□ -1.04
SPG7-205ENST00000561945 CXCL5P42830 114 aa8.58□□□□□ -1.04
SPG7-205ENST00000561945 MRPL55Q7Z7F7 128 aaKnown RBP8.58□□□□□ -1.04
SPG7-205ENST00000561945 CBLN2Q8IUK8 224 aa8.58□□□□□ -1.04
SPG7-205ENST00000561945 LINC00469Q8N7U9 141 aa8.58□□□□□ -1.04
SPG7-205ENST00000561945 YPEL4Q96NS1 127 aa8.58□□□□□ -1.04
SPG7-205ENST00000561945 XAGE1AQ9HD64 81 aa8.58□□□□□ -1.04
SPG7-205ENST00000561945 TOMM7Q9P0U1 55 aa8.58□□□□□ -1.04
SPG7-205ENST00000561945 A0A087X002 238 aa8.57□□□□□ -1.04
SPG7-205ENST00000561945 LINC00614P0C842 121 aa8.57□□□□□ -1.04
SPG7-205ENST00000561945 C18orf32Q8TCD1 76 aa8.57□□□□□ -1.04
SPG7-205ENST00000561945 RPL28P46779 137 aaKnown RBP8.56□□□□□ -1.04
SPG7-205ENST00000561945 IGLV5-37A0A075B6J1 123 aa8.55□□□□□ -1.04
SPG7-205ENST00000561945 IGLV5-45A0A087WSX0 123 aa8.55□□□□□ -1.04
SPG7-205ENST00000561945 KRTAP13-1Q8IUC0 172 aa8.55□□□□□ -1.04
SPG7-205ENST00000561945 SMIM1B2RUZ4 78 aa8.54□□□□□ -1.04
SPG7-205ENST00000561945 PDZD11Q5EBL8 140 aa8.54□□□□□ -1.04
SPG7-205ENST00000561945 LINC00167Q96N53 147 aa8.54□□□□□ -1.04
SPG7-205ENST00000561945 GEMIN7Q9H840 131 aaKnown RBP8.54□□□□□ -1.04
SPG7-205ENST00000561945 TINCRA0A1B0GVN0 87 aa8.53□□□□□ -1.04
SPG7-205ENST00000561945 CRYGAP11844 174 aa8.53□□□□□ -1.04
SPG7-205ENST00000561945 KRTAP9-2Q9BYQ4 174 aa8.53□□□□□ -1.04
SPG7-205ENST00000561945 A0A0U1RQV1 116 aa8.52□□□□□ -1.05
SPG7-205ENST00000561945 HBDP02042 147 aa8.52□□□□□ -1.05
SPG7-205ENST00000561945 PMVKQ15126 192 aa8.51□□□□□ -1.05
SPG7-205ENST00000561945 TYMSOSQ8TAI1 123 aa8.51□□□□□ -1.05
SPG7-205ENST00000561945 ATP5LO75964 103 aa8.5□□□□□ -1.05
SPG7-205ENST00000561945 TSPAN13O95857 204 aa8.5□□□□□ -1.05
SPG7-205ENST00000561945 TRGC2P03986 189 aa8.5□□□□□ -1.05
SPG7-205ENST00000561945 CTAG1AP78358 180 aa8.5□□□□□ -1.05
SPG7-205ENST00000561945 FAM229BQ4G0N7 80 aa8.5□□□□□ -1.05
SPG7-205ENST00000561945 KRTAP13-2Q52LG2 175 aa8.5□□□□□ -1.05
SPG7-205ENST00000561945 LCE2AQ5TA79 106 aaPredicted RBP8.5□□□□□ -1.05
SPG7-205ENST00000561945 BAGE3Q86Y29 109 aa8.5□□□□□ -1.05
SPG7-205ENST00000561945 COX7B2Q8TF08 81 aa8.5□□□□□ -1.05
SPG7-205ENST00000561945 CHCHD1Q96BP2 118 aaKnown RBP8.5□□□□□ -1.05
SPG7-205ENST00000561945 URB1-AS1Q96HZ7 61 aa8.5□□□□□ -1.05
SPG7-205ENST00000561945 CST9LQ9H4G1 147 aa8.5□□□□□ -1.05
SPG7-205ENST00000561945 NDUFA6P56556 154 aa8.49□□□□□ -1.05
SPG7-205ENST00000561945 RPL37AP8A6NKH3 93 aa8.48□□□□□ -1.05
SPG7-205ENST00000561945 COLCA2A8K830 154 aa8.48□□□□□ -1.05
SPG7-205ENST00000561945 A0A096LNJ9 63 aa8.47□□□□□ -1.05
SPG7-205ENST00000561945 PMCHL1Q16048 86 aa8.47□□□□□ -1.05
SPG7-205ENST00000561945 HSBP1O75506 76 aa8.46□□□□□ -1.06
SPG7-205ENST00000561945 H3BRM9 83 aa8.45□□□□□ -1.06
SPG7-205ENST00000561945 ANAPC11Q9NYG5 84 aa8.45□□□□□ -1.06
SPG7-205ENST00000561945 GAGE10A6NGK3 116 aa8.44□□□□□ -1.06
SPG7-205ENST00000561945 TPRXLQ17RH7 258 aa8.44□□□□□ -1.06
SPG7-205ENST00000561945 IGLV5-39A0A0G2JS06 123 aa8.43□□□□□ -1.06
SPG7-205ENST00000561945 SPINK8P0C7L1 97 aa8.43□□□□□ -1.06
SPG7-205ENST00000561945 NKAPP1Q8N9T2 125 aa8.43□□□□□ -1.06
SPG7-205ENST00000561945 SCO1O75880 301 aa8.42□□□□□ -1.06
SPG7-205ENST00000561945 IGLC3P0DOY3 106 aa8.42□□□□□ -1.06
SPG7-205ENST00000561945 UBE2AP49459 152 aa8.42□□□□□ -1.06
SPG7-205ENST00000561945 LINC00304Q8N9R0 145 aa8.42□□□□□ -1.06
SPG7-205ENST00000561945 IFI27L1Q96BM0 104 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms