RNA–Protein interactions for RNA: ENST00000561637.5

NME3-202, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 1,014 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-202ENST00000561637 SCGB3A1Q96QR1 104 aa15.38■□□□□ 0.05
NME3-202ENST00000561637 GNB1LQ9BYB4 327 aa15.38■□□□□ 0.05
NME3-202ENST00000561637 HERVK_113P63121 156 aa15.36■□□□□ 0.05
NME3-202ENST00000561637 ERASQ7Z444 233 aa15.36■□□□□ 0.05
NME3-202ENST00000561637 Q8IZM0 81 aa15.36■□□□□ 0.05
NME3-202ENST00000561637 S100PP25815 95 aa15.35■□□□□ 0.05
NME3-202ENST00000561637 CKS1BP61024 79 aa15.35■□□□□ 0.05
NME3-202ENST00000561637 C6orf226Q5I0X4 101 aa15.35■□□□□ 0.05
NME3-202ENST00000561637 GEMIN7Q9H840 131 aaKnown RBP15.35■□□□□ 0.05
NME3-202ENST00000561637 LINC01546A6NGU7 62 aa15.34■□□□□ 0.05
NME3-202ENST00000561637 C10orf91Q5T1B1 145 aa15.34■□□□□ 0.05
NME3-202ENST00000561637 MRPL18Q9H0U6 180 aaKnown RBP15.34■□□□□ 0.05
NME3-202ENST00000561637 XAGE1AQ9HD64 81 aa15.34■□□□□ 0.05
NME3-202ENST00000561637 PAPPA-AS1Q5QFB9 102 aa15.33■□□□□ 0.04
NME3-202ENST00000561637 SMIM1B2RUZ4 78 aa15.32■□□□□ 0.04
NME3-202ENST00000561637 FABP9Q0Z7S8 132 aa15.32■□□□□ 0.04
NME3-202ENST00000561637 RPS10P5Q9NQ39 176 aa15.32■□□□□ 0.04
NME3-202ENST00000561637 G0S2P27469 103 aa15.31■□□□□ 0.04
NME3-202ENST00000561637 UBE2BP63146 152 aa15.31■□□□□ 0.04
NME3-202ENST00000561637 CARHSP1Q9Y2V2 147 aaKnown RBP15.31■□□□□ 0.04
NME3-202ENST00000561637 SEC11AP67812 179 aa15.3■□□□□ 0.04
NME3-202ENST00000561637 PRR26Q8N8Z3 221 aa15.29■□□□□ 0.04
NME3-202ENST00000561637 CST9LQ9H4G1 147 aa15.29■□□□□ 0.04
NME3-202ENST00000561637 FA2HQ7L5A8 372 aa15.28■□□□□ 0.04
NME3-202ENST00000561637 IGLV5-45A0A087WSX0 123 aa15.27■□□□□ 0.04
NME3-202ENST00000561637 TINCRA0A1B0GVN0 87 aa15.27■□□□□ 0.04
NME3-202ENST00000561637 F8VRH5 84 aa15.27■□□□□ 0.04
NME3-202ENST00000561637 H0Y9J4 135 aa15.27■□□□□ 0.04
NME3-202ENST00000561637 SPINK8P0C7L1 97 aa15.27■□□□□ 0.04
NME3-202ENST00000561637 DIRC1Q969H9 104 aa15.27■□□□□ 0.04
NME3-202ENST00000561637 URB1-AS1Q96HZ7 61 aa15.27■□□□□ 0.04
NME3-202ENST00000561637 RHEBQ15382 184 aa15.26■□□□□ 0.03
NME3-202ENST00000561637 A0A096LNJ9 63 aa15.25■□□□□ 0.03
NME3-202ENST00000561637 COX7B2Q8TF08 81 aa15.25■□□□□ 0.03
NME3-202ENST00000561637 C22orf24Q9Y442 160 aa15.25■□□□□ 0.03
NME3-202ENST00000561637 COX19Q49B96 90 aa15.24■□□□□ 0.03
NME3-202ENST00000561637 KRTAP9-2Q9BYQ4 174 aa15.24■□□□□ 0.03
NME3-202ENST00000561637 SMCO4Q9NRQ5 59 aa15.24■□□□□ 0.03
NME3-202ENST00000561637 KRTAP1-4P0C5Y4 121 aa15.23■□□□□ 0.03
NME3-202ENST00000561637 PMVKQ15126 192 aa15.23■□□□□ 0.03
NME3-202ENST00000561637 PDZD11Q5EBL8 140 aa15.23■□□□□ 0.03
NME3-202ENST00000561637 PMCHL1Q16048 86 aa15.21■□□□□ 0.03
NME3-202ENST00000561637 CXCL5P42830 114 aa15.2■□□□□ 0.02
NME3-202ENST00000561637 C18orf32Q8TCD1 76 aa15.2■□□□□ 0.02
NME3-202ENST00000561637 TRAPPC1Q9Y5R8 145 aa15.18■□□□□ 0.02
NME3-202ENST00000561637 MUC2Q02817 5179 aa15.17■□□□□ 0.02
NME3-202ENST00000561637 RAB5BP61020 215 aa15.17■□□□□ 0.02
NME3-202ENST00000561637 LINC01549A6NIU2 74 aa15.16■□□□□ 0.02
NME3-202ENST00000561637 APOC3P02656 99 aa15.16■□□□□ 0.02
NME3-202ENST00000561637 NDUFA6P56556 154 aa15.16■□□□□ 0.02
NME3-202ENST00000561637 IGLC3P0DOY3 106 aa15.15■□□□□ 0.02
NME3-202ENST00000561637 MRPL55Q7Z7F7 128 aaKnown RBP15.14■□□□□ 0.01
NME3-202ENST00000561637 ZNF22P17026 224 aaPredicted RBP15.13■□□□□ 0.01
NME3-202ENST00000561637 GAGE10A6NGK3 116 aa15.12■□□□□ 0.01
NME3-202ENST00000561637 RPL37AP8A6NKH3 93 aa15.12■□□□□ 0.01
NME3-202ENST00000561637 LINC00614P0C842 121 aa15.12■□□□□ 0.01
NME3-202ENST00000561637 LBHQ53QV2 105 aaPredicted RBP15.12■□□□□ 0.01
NME3-202ENST00000561637 IGLV5-39A0A0G2JS06 123 aa15.11■□□□□ 0.01
NME3-202ENST00000561637 ZNF861PO60384 105 aa15.11■□□□□ 0.01
NME3-202ENST00000561637 SCO1O75880 301 aa15.11■□□□□ 0.01
NME3-202ENST00000561637 HBDP02042 147 aa15.11■□□□□ 0.01
NME3-202ENST00000561637 LINC00167Q96N53 147 aa15.11■□□□□ 0.01
NME3-202ENST00000561637 TP73-AS1Q9UF72 201 aa15.11■□□□□ 0.01
NME3-202ENST00000561637 H3BRM9 83 aa15.09■□□□□ 0.01
NME3-202ENST00000561637 IGLV1-50A0A075B6I6 118 aa15.08■□□□□ 0
NME3-202ENST00000561637 NUPR1O60356 82 aa15.08■□□□□ 0
NME3-202ENST00000561637 C11orf86A6NJI1 115 aa15.07■□□□□ 0
NME3-202ENST00000561637 YPEL4Q96NS1 127 aa15.07■□□□□ 0
NME3-202ENST00000561637 PFN2P35080 140 aa15.06■□□□□ 0
NME3-202ENST00000561637 ATP5LO75964 103 aa15.05■□□□□ -0
NME3-202ENST00000561637 SNAPINO95295 136 aa15.05■□□□□ -0
NME3-202ENST00000561637 BCE1O60756 84 aa15.04■□□□□ -0
NME3-202ENST00000561637 BAGE3Q86Y29 109 aa15.04■□□□□ -0
NME3-202ENST00000561637 SVBPQ8N300 66 aa15.04■□□□□ -0
NME3-202ENST00000561637 IGLV5-37A0A075B6J1 123 aa15.03■□□□□ -0
NME3-202ENST00000561637 ZNF625Q96I27 306 aaPredicted RBP15.03■□□□□ -0
NME3-202ENST00000561637 Q8NDZ9 215 aa15.02■□□□□ -0
NME3-202ENST00000561637 NDUFA5Q16718 116 aa15.01□□□□□ -0.01
NME3-202ENST00000561637 NKAPP1Q8N9T2 125 aa15□□□□□ -0.01
NME3-202ENST00000561637 TMEM170BQ5T4T1 132 aa14.99□□□□□ -0.01
NME3-202ENST00000561637 SND1-IT1Q9HBX3 110 aa14.99□□□□□ -0.01
NME3-202ENST00000561637 ERG28Q9UKR5 140 aa14.99□□□□□ -0.01
NME3-202ENST00000561637 IGKV2-28A0A075B6P5 120 aa14.98□□□□□ -0.01
NME3-202ENST00000561637 A0A087X002 238 aa14.98□□□□□ -0.01
NME3-202ENST00000561637 IGKV2D-28P01615 120 aa14.98□□□□□ -0.01
NME3-202ENST00000561637 VPREB1P12018 145 aa14.97□□□□□ -0.01
NME3-202ENST00000561637 RPL28P46779 137 aaKnown RBP14.97□□□□□ -0.01
NME3-202ENST00000561637 KRTAP13-1Q8IUC0 172 aa14.97□□□□□ -0.01
NME3-202ENST00000561637 CBLN2Q8IUK8 224 aa14.97□□□□□ -0.01
NME3-202ENST00000561637 ANAPC11Q9NYG5 84 aa14.97□□□□□ -0.01
NME3-202ENST00000561637 KRTAP9-6A0A140TA67 174 aa14.96□□□□□ -0.01
NME3-202ENST00000561637 CHTOPQ9Y3Y2 248 aaKnown RBP14.96□□□□□ -0.01
NME3-202ENST00000561637 RPL13AP40429 203 aaKnown RBP14.95□□□□□ -0.02
NME3-202ENST00000561637 FAT4Q6V0I7 4981 aa14.92□□□□□ -0.02
NME3-202ENST00000561637 TMEM238C9JI98 176 aa14.92□□□□□ -0.02
NME3-202ENST00000561637 IFI27L1Q96BM0 104 aa14.91□□□□□ -0.02
NME3-202ENST00000561637 UBE2AP49459 152 aa14.9□□□□□ -0.02
NME3-202ENST00000561637 FAM19A2Q8N3H0 131 aa14.9□□□□□ -0.02
NME3-202ENST00000561637 CHCHD1Q96BP2 118 aaKnown RBP14.9□□□□□ -0.02
NME3-202ENST00000561637 A0A0U1RRA0 63 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms