RNA–Protein interactions for RNA: ENST00000561187.1

SNRPA1-215, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-215ENST00000561187 PRR4Q16378 134 aa16.16■□□□□ 0.18
SNRPA1-215ENST00000561187 FAM19A3Q7Z5A8 133 aa16.16■□□□□ 0.18
SNRPA1-215ENST00000561187 ZNF861PO60384 105 aa16.15■□□□□ 0.18
SNRPA1-215ENST00000561187 NPSP0C0P6 89 aa16.15■□□□□ 0.18
SNRPA1-215ENST00000561187 F8VRH5 84 aa16.14■□□□□ 0.17
SNRPA1-215ENST00000561187 K7EMI3 77 aa16.14■□□□□ 0.17
SNRPA1-215ENST00000561187 RAB14P61106 215 aa16.14■□□□□ 0.17
SNRPA1-215ENST00000561187 RPL13AP40429 203 aaKnown RBP16.13■□□□□ 0.17
SNRPA1-215ENST00000561187 TOMM6Q96B49 74 aa16.13■□□□□ 0.17
SNRPA1-215ENST00000561187 TIMM17AQ99595 171 aa16.13■□□□□ 0.17
SNRPA1-215ENST00000561187 SEC11AP67812 179 aa16.12■□□□□ 0.17
SNRPA1-215ENST00000561187 PAPPA-AS1Q5QFB9 102 aa16.12■□□□□ 0.17
SNRPA1-215ENST00000561187 LBHQ53QV2 105 aaPredicted RBP16.11■□□□□ 0.17
SNRPA1-215ENST00000561187 NUPR1O60356 82 aa16.1■□□□□ 0.17
SNRPA1-215ENST00000561187 ADCYAP1P18509 176 aa16.1■□□□□ 0.17
SNRPA1-215ENST00000561187 MRPL55Q7Z7F7 128 aaKnown RBP16.1■□□□□ 0.17
SNRPA1-215ENST00000561187 SCGB3A1Q96QR1 104 aa16.1■□□□□ 0.17
SNRPA1-215ENST00000561187 SMIM1B2RUZ4 78 aa16.09■□□□□ 0.17
SNRPA1-215ENST00000561187 GAGE10A6NGK3 116 aa16.07■□□□□ 0.16
SNRPA1-215ENST00000561187 RPL37AP8A6NKH3 93 aa16.07■□□□□ 0.16
SNRPA1-215ENST00000561187 TSPAN13O95857 204 aa16.07■□□□□ 0.16
SNRPA1-215ENST00000561187 G0S2P27469 103 aa16.06■□□□□ 0.16
SNRPA1-215ENST00000561187 CXCL5P42830 114 aa16.06■□□□□ 0.16
SNRPA1-215ENST00000561187 ERASQ7Z444 233 aa16.06■□□□□ 0.16
SNRPA1-215ENST00000561187 COX7B2Q8TF08 81 aa16.06■□□□□ 0.16
SNRPA1-215ENST00000561187 SPINK8P0C7L1 97 aa16.05■□□□□ 0.16
SNRPA1-215ENST00000561187 RAB5BP61020 215 aa16.05■□□□□ 0.16
SNRPA1-215ENST00000561187 CARHSP1Q9Y2V2 147 aaKnown RBP16.05■□□□□ 0.16
SNRPA1-215ENST00000561187 A0A087X002 238 aa16.03■□□□□ 0.16
SNRPA1-215ENST00000561187 BCE1O60756 84 aa16.03■□□□□ 0.16
SNRPA1-215ENST00000561187 LINC00167Q96N53 147 aa16.03■□□□□ 0.16
SNRPA1-215ENST00000561187 TP73-AS1Q9UF72 201 aa16.03■□□□□ 0.16
SNRPA1-215ENST00000561187 TINCRA0A1B0GVN0 87 aa16.02■□□□□ 0.16
SNRPA1-215ENST00000561187 RPL28P46779 137 aaKnown RBP16.02■□□□□ 0.16
SNRPA1-215ENST00000561187 PDZD11Q5EBL8 140 aa16.01■□□□□ 0.15
SNRPA1-215ENST00000561187 ANAPC11Q9NYG5 84 aa15.99■□□□□ 0.15
SNRPA1-215ENST00000561187 IGLV5-45A0A087WSX0 123 aa15.98■□□□□ 0.15
SNRPA1-215ENST00000561187 SCO1O75880 301 aa15.98■□□□□ 0.15
SNRPA1-215ENST00000561187 MUC2Q02817 5179 aa15.98■□□□□ 0.15
SNRPA1-215ENST00000561187 CLLU1Q5K131 121 aa15.98■□□□□ 0.15
SNRPA1-215ENST00000561187 CST9LQ9H4G1 147 aa15.98■□□□□ 0.15
SNRPA1-215ENST00000561187 NKAPP1Q8N9T2 125 aa15.95■□□□□ 0.14
SNRPA1-215ENST00000561187 TYMSOSQ8TAI1 123 aa15.95■□□□□ 0.14
SNRPA1-215ENST00000561187 TMEM218A2RU14 115 aa15.94■□□□□ 0.14
SNRPA1-215ENST00000561187 FA2HQ7L5A8 372 aa15.94■□□□□ 0.14
SNRPA1-215ENST00000561187 TRAV9-1A0A075B6T8 112 aa15.93■□□□□ 0.14
SNRPA1-215ENST00000561187 CRYGAP11844 174 aa15.93■□□□□ 0.14
SNRPA1-215ENST00000561187 S100PP25815 95 aa15.93■□□□□ 0.14
SNRPA1-215ENST00000561187 UBE2AP49459 152 aa15.93■□□□□ 0.14
SNRPA1-215ENST00000561187 PMVKQ15126 192 aa15.93■□□□□ 0.14
SNRPA1-215ENST00000561187 SMCO4Q9NRQ5 59 aa15.93■□□□□ 0.14
SNRPA1-215ENST00000561187 IGKV2-28A0A075B6P5 120 aa15.92■□□□□ 0.14
SNRPA1-215ENST00000561187 IGKV2D-28P01615 120 aa15.92■□□□□ 0.14
SNRPA1-215ENST00000561187 GNB1LQ9BYB4 327 aa15.92■□□□□ 0.14
SNRPA1-215ENST00000561187 LINC01546A6NGU7 62 aa15.91■□□□□ 0.14
SNRPA1-215ENST00000561187 PFN2P35080 140 aa15.91■□□□□ 0.14
SNRPA1-215ENST00000561187 ATP5LO75964 103 aa15.89■□□□□ 0.13
SNRPA1-215ENST00000561187 NDUFA6P56556 154 aa15.89■□□□□ 0.13
SNRPA1-215ENST00000561187 FABP9Q0Z7S8 132 aa15.89■□□□□ 0.13
SNRPA1-215ENST00000561187 UQCC3Q6UW78 93 aa15.89■□□□□ 0.13
SNRPA1-215ENST00000561187 MRPL18Q9H0U6 180 aaKnown RBP15.89■□□□□ 0.13
SNRPA1-215ENST00000561187 IGLV5-37A0A075B6J1 123 aa15.88■□□□□ 0.13
SNRPA1-215ENST00000561187 H3BRM9 83 aa15.88■□□□□ 0.13
SNRPA1-215ENST00000561187 LINC01549A6NIU2 74 aa15.86■□□□□ 0.13
SNRPA1-215ENST00000561187 PRLHP81277 87 aa15.86■□□□□ 0.13
SNRPA1-215ENST00000561187 KRTAP13-2Q52LG2 175 aa15.86■□□□□ 0.13
SNRPA1-215ENST00000561187 KRTAP13-1Q8IUC0 172 aa15.86■□□□□ 0.13
SNRPA1-215ENST00000561187 RETNLBQ9BQ08 111 aa15.85■□□□□ 0.13
SNRPA1-215ENST00000561187 IGLC3P0DOY3 106 aa15.83■□□□□ 0.12
SNRPA1-215ENST00000561187 ZNF625Q96I27 306 aaPredicted RBP15.83■□□□□ 0.12
SNRPA1-215ENST00000561187 SEC11CQ9BY50 192 aa15.83■□□□□ 0.12
SNRPA1-215ENST00000561187 ZNF22P17026 224 aaPredicted RBP15.82■□□□□ 0.12
SNRPA1-215ENST00000561187 IFITM2Q01629 132 aa15.82■□□□□ 0.12
SNRPA1-215ENST00000561187 A0A096LNJ9 63 aa15.81■□□□□ 0.12
SNRPA1-215ENST00000561187 TMEM238C9JI98 176 aa15.81■□□□□ 0.12
SNRPA1-215ENST00000561187 PMCHL1Q16048 86 aa15.81■□□□□ 0.12
SNRPA1-215ENST00000561187 IGLV5-39A0A0G2JS06 123 aa15.8■□□□□ 0.12
SNRPA1-215ENST00000561187 FAM19A1Q7Z5A9 133 aa15.8■□□□□ 0.12
SNRPA1-215ENST00000561187 SND1-IT1Q9HBX3 110 aa15.8■□□□□ 0.12
SNRPA1-215ENST00000561187 COMMD7Q86VX2 200 aa15.79■□□□□ 0.12
SNRPA1-215ENST00000561187 RPS10P5Q9NQ39 176 aa15.79■□□□□ 0.12
SNRPA1-215ENST00000561187 ERG28Q9UKR5 140 aa15.79■□□□□ 0.12
SNRPA1-215ENST00000561187 VPREB1P12018 145 aa15.78■□□□□ 0.12
SNRPA1-215ENST00000561187 COX19Q49B96 90 aa15.78■□□□□ 0.12
SNRPA1-215ENST00000561187 LINC00304Q8N9R0 145 aa15.77■□□□□ 0.12
SNRPA1-215ENST00000561187 URB1-AS1Q96HZ7 61 aa15.77■□□□□ 0.12
SNRPA1-215ENST00000561187 Q8NDZ9 215 aa15.76■□□□□ 0.11
SNRPA1-215ENST00000561187 TMEM126AQ9H061 195 aa15.76■□□□□ 0.11
SNRPA1-215ENST00000561187 IGKV2D-26A0A0A0MRZ7 120 aa15.73■□□□□ 0.11
SNRPA1-215ENST00000561187 C11orf86A6NJI1 115 aa15.73■□□□□ 0.11
SNRPA1-215ENST00000561187 HBDP02042 147 aa15.73■□□□□ 0.11
SNRPA1-215ENST00000561187 FAM229BQ4G0N7 80 aa15.73■□□□□ 0.11
SNRPA1-215ENST00000561187 C18orf32Q8TCD1 76 aa15.73■□□□□ 0.11
SNRPA1-215ENST00000561187 TMEM170BQ5T4T1 132 aa15.72■□□□□ 0.11
SNRPA1-215ENST00000561187 M0R378 163 aa15.71■□□□□ 0.11
SNRPA1-215ENST00000561187 TRAPPC1Q9Y5R8 145 aa15.71■□□□□ 0.11
SNRPA1-215ENST00000561187 LINC00614P0C842 121 aa15.7■□□□□ 0.1
SNRPA1-215ENST00000561187 RPL24P83731 157 aaKnown RBP15.7■□□□□ 0.1
SNRPA1-215ENST00000561187 RHEBQ15382 184 aa15.7■□□□□ 0.1
SNRPA1-215ENST00000561187 BAGE3Q86Y29 109 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms