RNA–Protein interactions for RNA: ENST00000560445.1

TPM1-223, Transcript of tropomyosin 1, humanhuman

TSL 3 BASIC

Gene TPM1, Length 485 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-223ENST00000560445 FAM19A5Q7Z5A7 132 aaPredicted RBP8.68□□□□□ -1.02
TPM1-223ENST00000560445 ALKBH7Q9BT30 221 aaPredicted RBP8.68□□□□□ -1.02
TPM1-223ENST00000560445 RPS10P5Q9NQ39 176 aa8.68□□□□□ -1.02
TPM1-223ENST00000560445 M0QXV9 152 aa8.67□□□□□ -1.02
TPM1-223ENST00000560445 ERASQ7Z444 233 aa8.67□□□□□ -1.02
TPM1-223ENST00000560445 TOMM6Q96B49 74 aa8.67□□□□□ -1.02
TPM1-223ENST00000560445 SCGB3A1Q96QR1 104 aa8.67□□□□□ -1.02
TPM1-223ENST00000560445 TOMM7Q9P0U1 55 aa8.67□□□□□ -1.02
TPM1-223ENST00000560445 IGLV7-43P04211 117 aa8.66□□□□□ -1.02
TPM1-223ENST00000560445 FABP9Q0Z7S8 132 aa8.66□□□□□ -1.02
TPM1-223ENST00000560445 ODF1Q14990 250 aa8.66□□□□□ -1.02
TPM1-223ENST00000560445 LINC00173Q6ZV60 143 aa8.66□□□□□ -1.02
TPM1-223ENST00000560445 SMCO4Q9NRQ5 59 aa8.66□□□□□ -1.02
TPM1-223ENST00000560445 LBHQ53QV2 105 aaPredicted RBP8.65□□□□□ -1.02
TPM1-223ENST00000560445 C10orf91Q5T1B1 145 aa8.65□□□□□ -1.02
TPM1-223ENST00000560445 ZC2HC1BQ5TFG8 222 aa8.65□□□□□ -1.02
TPM1-223ENST00000560445 FA2HQ7L5A8 372 aa8.65□□□□□ -1.02
TPM1-223ENST00000560445 CARHSP1Q9Y2V2 147 aaKnown RBP8.65□□□□□ -1.02
TPM1-223ENST00000560445 F8VRH5 84 aa8.64□□□□□ -1.03
TPM1-223ENST00000560445 LORP23490 312 aaPredicted RBP8.64□□□□□ -1.03
TPM1-223ENST00000560445 KRTAP10-8P60410 259 aa8.64□□□□□ -1.03
TPM1-223ENST00000560445 NDUFA5Q16718 116 aa8.64□□□□□ -1.03
TPM1-223ENST00000560445 C2orf82Q6UX34 121 aa8.64□□□□□ -1.03
TPM1-223ENST00000560445 MRPL18Q9H0U6 180 aaKnown RBP8.64□□□□□ -1.03
TPM1-223ENST00000560445 LINC00469Q8N7U9 141 aa8.63□□□□□ -1.03
TPM1-223ENST00000560445 TINCRA0A1B0GVN0 87 aa8.62□□□□□ -1.03
TPM1-223ENST00000560445 FAM168BA1KXE4 195 aa8.62□□□□□ -1.03
TPM1-223ENST00000560445 H0Y9J4 135 aa8.62□□□□□ -1.03
TPM1-223ENST00000560445 PDZD11Q5EBL8 140 aa8.62□□□□□ -1.03
TPM1-223ENST00000560445 CDKN2A-AS1Q9UH64 79 aa8.62□□□□□ -1.03
TPM1-223ENST00000560445 LINC01546A6NGU7 62 aa8.61□□□□□ -1.03
TPM1-223ENST00000560445 H3BRM9 83 aa8.61□□□□□ -1.03
TPM1-223ENST00000560445 NUPR1O60356 82 aa8.61□□□□□ -1.03
TPM1-223ENST00000560445 IGLV1-50A0A075B6I6 118 aa8.6□□□□□ -1.03
TPM1-223ENST00000560445 SNAPINO95295 136 aa8.6□□□□□ -1.03
TPM1-223ENST00000560445 APOC3P02656 99 aa8.6□□□□□ -1.03
TPM1-223ENST00000560445 RPL13AP40429 203 aaKnown RBP8.6□□□□□ -1.03
TPM1-223ENST00000560445 SVBPQ8N300 66 aa8.6□□□□□ -1.03
TPM1-223ENST00000560445 TRAPPC1Q9Y5R8 145 aa8.6□□□□□ -1.03
TPM1-223ENST00000560445 PMVKQ15126 192 aa8.59□□□□□ -1.03
TPM1-223ENST00000560445 C9orf129Q5T035 196 aaKnown RBP8.59□□□□□ -1.03
TPM1-223ENST00000560445 CST9LQ9H4G1 147 aa8.59□□□□□ -1.03
TPM1-223ENST00000560445 TP73-AS1Q9UF72 201 aa8.59□□□□□ -1.03
TPM1-223ENST00000560445 IGLV5-45A0A087WSX0 123 aa8.58□□□□□ -1.04
TPM1-223ENST00000560445 COX7B2Q8TF08 81 aa8.58□□□□□ -1.04
TPM1-223ENST00000560445 SMIM1B2RUZ4 78 aa8.57□□□□□ -1.04
TPM1-223ENST00000560445 RAB5BP61020 215 aa8.57□□□□□ -1.04
TPM1-223ENST00000560445 ATP5LO75964 103 aa8.56□□□□□ -1.04
TPM1-223ENST00000560445 LINC00614P0C842 121 aa8.56□□□□□ -1.04
TPM1-223ENST00000560445 NDUFA6P56556 154 aa8.55□□□□□ -1.04
TPM1-223ENST00000560445 SFTA2Q6UW10 78 aa8.55□□□□□ -1.04
TPM1-223ENST00000560445 MRPL55Q7Z7F7 128 aaKnown RBP8.55□□□□□ -1.04
TPM1-223ENST00000560445 XAGE1AQ9HD64 81 aa8.55□□□□□ -1.04
TPM1-223ENST00000560445 C22orf24Q9Y442 160 aa8.55□□□□□ -1.04
TPM1-223ENST00000560445 TNXBP22105 4242 aa8.55□□□□□ -1.04
TPM1-223ENST00000560445 ZNF861PO60384 105 aa8.54□□□□□ -1.04
TPM1-223ENST00000560445 RPL28P46779 137 aaKnown RBP8.54□□□□□ -1.04
TPM1-223ENST00000560445 HBDP02042 147 aa8.53□□□□□ -1.04
TPM1-223ENST00000560445 KRTAP7-1Q8IUC3 87 aa8.53□□□□□ -1.04
TPM1-223ENST00000560445 NKAPP1Q8N9T2 125 aa8.53□□□□□ -1.04
TPM1-223ENST00000560445 C18orf32Q8TCD1 76 aa8.53□□□□□ -1.04
TPM1-223ENST00000560445 UBR4Q5T4S7 5183 aa8.53□□□□□ -1.04
TPM1-223ENST00000560445 LOC100996750A0A140TA64 210 aa8.52□□□□□ -1.05
TPM1-223ENST00000560445 PRR26Q8N8Z3 221 aa8.52□□□□□ -1.05
TPM1-223ENST00000560445 KRTAP4-6Q9BYQ5 205 aa8.52□□□□□ -1.05
TPM1-223ENST00000560445 SPINK8P0C7L1 97 aa8.51□□□□□ -1.05
TPM1-223ENST00000560445 KRTAP11-1Q8IUC1 163 aa8.51□□□□□ -1.05
TPM1-223ENST00000560445 BCE1O60756 84 aa8.5□□□□□ -1.05
TPM1-223ENST00000560445 IGLC3P0DOY3 106 aa8.5□□□□□ -1.05
TPM1-223ENST00000560445 COX17Q14061 63 aa8.49□□□□□ -1.05
TPM1-223ENST00000560445 IGLV5-37A0A075B6J1 123 aa8.48□□□□□ -1.05
TPM1-223ENST00000560445 BAGE3Q86Y29 109 aa8.48□□□□□ -1.05
TPM1-223ENST00000560445 KRTAP1-4P0C5Y4 121 aa8.47□□□□□ -1.05
TPM1-223ENST00000560445 RPL24P83731 157 aaKnown RBP8.47□□□□□ -1.05
TPM1-223ENST00000560445 PMCHL1Q16048 86 aa8.47□□□□□ -1.05
TPM1-223ENST00000560445 CHCHD1Q96BP2 118 aaKnown RBP8.47□□□□□ -1.05
TPM1-223ENST00000560445 URB1-AS1Q96HZ7 61 aa8.47□□□□□ -1.05
TPM1-223ENST00000560445 A0A096LNJ9 63 aa8.46□□□□□ -1.06
TPM1-223ENST00000560445 IGLV5-39A0A0G2JS06 123 aa8.46□□□□□ -1.06
TPM1-223ENST00000560445 LINC00167Q96N53 147 aa8.46□□□□□ -1.06
TPM1-223ENST00000560445 LRP2P98164 4655 aa8.45□□□□□ -1.06
TPM1-223ENST00000560445 ZNF22P17026 224 aaPredicted RBP8.45□□□□□ -1.06
TPM1-223ENST00000560445 UBE2AP49459 152 aa8.45□□□□□ -1.06
TPM1-223ENST00000560445 TMEM170BQ5T4T1 132 aa8.45□□□□□ -1.06
TPM1-223ENST00000560445 ERG28Q9UKR5 140 aa8.45□□□□□ -1.06
TPM1-223ENST00000560445 CRYGAP11844 174 aa8.44□□□□□ -1.06
TPM1-223ENST00000560445 PFN2P35080 140 aa8.44□□□□□ -1.06
TPM1-223ENST00000560445 CHTOPQ9Y3Y2 248 aaKnown RBP8.44□□□□□ -1.06
TPM1-223ENST00000560445 RPL37AP8A6NKH3 93 aa8.43□□□□□ -1.06
TPM1-223ENST00000560445 GAGE10A6NGK3 116 aa8.42□□□□□ -1.06
TPM1-223ENST00000560445 HSBP1O75506 76 aa8.42□□□□□ -1.06
TPM1-223ENST00000560445 YPEL4Q96NS1 127 aa8.42□□□□□ -1.06
TPM1-223ENST00000560445 C11orf86A6NJI1 115 aa8.41□□□□□ -1.06
TPM1-223ENST00000560445 IFI27L1Q96BM0 104 aa8.41□□□□□ -1.06
TPM1-223ENST00000560445 TRAV12-1A0A0B4J245 112 aa8.4□□□□□ -1.06
TPM1-223ENST00000560445 LINC00587B1AMM8 73 aa8.4□□□□□ -1.06
TPM1-223ENST00000560445 ATP6V1G1O75348 118 aa8.4□□□□□ -1.06
TPM1-223ENST00000560445 SND1-IT1Q9HBX3 110 aa8.4□□□□□ -1.06
TPM1-223ENST00000560445 FAM229BQ4G0N7 80 aa8.39□□□□□ -1.07
TPM1-223ENST00000560445 CBLN2Q8IUK8 224 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 88.2 ms