RNA–Protein interactions for RNA: ENST00000560353.1

APH1B-208, Transcript of aph-1 homolog B, gamma-secretase subunit, humanhuman

TSL 3

Gene APH1B, Length 672 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APH1B-208ENST00000560353 HIST1H2BCP62807 126 aa5.84□□□□□ -1.47
APH1B-208ENST00000560353 HIST2H2BEQ16778 126 aa5.84□□□□□ -1.47
APH1B-208ENST00000560353 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.84□□□□□ -1.47
APH1B-208ENST00000560353 AKR1C8PQ5T2L2 129 aa5.84□□□□□ -1.47
APH1B-208ENST00000560353 LINC00242Q5T6M2 205 aa5.84□□□□□ -1.47
APH1B-208ENST00000560353 HIST1H2BHQ93079 126 aa5.84□□□□□ -1.47
APH1B-208ENST00000560353 HIST1H2BNQ99877 126 aa5.84□□□□□ -1.47
APH1B-208ENST00000560353 HIST1H2BMQ99879 126 aa5.84□□□□□ -1.47
APH1B-208ENST00000560353 SNHG12Q9BXW3 62 aa5.84□□□□□ -1.47
APH1B-208ENST00000560353 IGKV2D-26A0A0A0MRZ7 120 aa5.83□□□□□ -1.48
APH1B-208ENST00000560353 UMAD1C9J7I0 102 aa5.83□□□□□ -1.48
APH1B-208ENST00000560353 C10orf25Q5T742 122 aa5.83□□□□□ -1.48
APH1B-208ENST00000560353 RPL39LQ96EH5 51 aaKnown RBP5.83□□□□□ -1.48
APH1B-208ENST00000560353 PACRGQ96M98 296 aaPredicted RBP5.83□□□□□ -1.48
APH1B-208ENST00000560353 BCE1O60756 84 aa5.82□□□□□ -1.48
APH1B-208ENST00000560353 FABP4P15090 132 aa5.82□□□□□ -1.48
APH1B-208ENST00000560353 KRTAP19-2Q3LHN2 52 aa5.82□□□□□ -1.48
APH1B-208ENST00000560353 COA6Q5JTJ3 125 aaKnown RBP5.82□□□□□ -1.48
APH1B-208ENST00000560353 UNQ6190/PRO20217Q6UXQ8 127 aa5.82□□□□□ -1.48
APH1B-208ENST00000560353 ORAOV1Q8WV07 137 aa5.82□□□□□ -1.48
APH1B-208ENST00000560353 HIST1H2BLQ99880 126 aa5.82□□□□□ -1.48
APH1B-208ENST00000560353 C6orf48Q9UBA6 75 aa5.82□□□□□ -1.48
APH1B-208ENST00000560353 TRAV13-1A0A0B4J241 112 aa5.81□□□□□ -1.48
APH1B-208ENST00000560353 XKRY2A2RUG3 117 aa5.81□□□□□ -1.48
APH1B-208ENST00000560353 MAP1LC3B2A6NCE7 125 aa5.81□□□□□ -1.48
APH1B-208ENST00000560353 RPL7L1Q6DKI1 246 aaKnown RBP5.81□□□□□ -1.48
APH1B-208ENST00000560353 LYZL1Q6UWQ5 148 aa5.81□□□□□ -1.48
APH1B-208ENST00000560353 MAP1LC3BQ9GZQ8 125 aa5.81□□□□□ -1.48
APH1B-208ENST00000560353 IFNA1P01562 189 aa5.8□□□□□ -1.48
APH1B-208ENST00000560353 NPSP0C0P6 89 aa5.8□□□□□ -1.48
APH1B-208ENST00000560353 CTRLP40313 264 aa5.8□□□□□ -1.48
APH1B-208ENST00000560353 TWIST1Q15672 202 aa5.8□□□□□ -1.48
APH1B-208ENST00000560353 C9orf129Q5T035 196 aaKnown RBP5.8□□□□□ -1.48
APH1B-208ENST00000560353 TMEM242Q9NWH2 141 aa5.8□□□□□ -1.48
APH1B-208ENST00000560353 NDUFC2-KCTD14E9PQ53 114 aa5.79□□□□□ -1.48
APH1B-208ENST00000560353 PAGE4O60829 102 aa5.79□□□□□ -1.48
APH1B-208ENST00000560353 TRGC2P03986 189 aa5.79□□□□□ -1.48
APH1B-208ENST00000560353 TAGLN2P37802 199 aaKnown RBP5.79□□□□□ -1.48
APH1B-208ENST00000560353 SMAGPQ0VAQ4 97 aa5.79□□□□□ -1.48
APH1B-208ENST00000560353 SPAG11AQ6PDA7 123 aa5.79□□□□□ -1.48
APH1B-208ENST00000560353 EIF5A2Q9GZV4 153 aaKnown RBP5.79□□□□□ -1.48
APH1B-208ENST00000560353 C22orf24Q9Y442 160 aa5.79□□□□□ -1.48
APH1B-208ENST00000560353 CSDC2Q9Y534 153 aaKnown RBP5.79□□□□□ -1.48
APH1B-208ENST00000560353 TRBV24-1A0A075B6N3 115 aa5.78□□□□□ -1.48
APH1B-208ENST00000560353 TRBV6-5A0A0K0K1A5 114 aa5.78□□□□□ -1.48
APH1B-208ENST00000560353 M0R2T5 61 aa5.78□□□□□ -1.48
APH1B-208ENST00000560353 SRP19P09132 144 aaKnown RBP5.78□□□□□ -1.48
APH1B-208ENST00000560353 SMIM15Q7Z3B0 74 aa5.78□□□□□ -1.48
APH1B-208ENST00000560353 SSPOA2VEC9 5147 aa5.77□□□□□ -1.49
APH1B-208ENST00000560353 TGIF2-C20orf24A0A0A6YYL0 155 aa5.77□□□□□ -1.49
APH1B-208ENST00000560353 BORCS7-ASMTA0A0B4J1R7 106 aa5.77□□□□□ -1.49
APH1B-208ENST00000560353 TRBV30A0A0K0K1B3 111 aa5.77□□□□□ -1.49
APH1B-208ENST00000560353 ZNF727A8MUV8 499 aa5.77□□□□□ -1.49
APH1B-208ENST00000560353 RNASE13Q5GAN3 156 aaKnown RBP5.77□□□□□ -1.49
APH1B-208ENST00000560353 CNFNQ9BYD5 112 aa5.77□□□□□ -1.49
APH1B-208ENST00000560353 ST20Q9HBF5 79 aa5.77□□□□□ -1.49
APH1B-208ENST00000560353 FCGBPQ9Y6R7 5405 aaPredicted RBP5.76□□□□□ -1.49
APH1B-208ENST00000560353 USH2AO75445 5202 aa5.76□□□□□ -1.49
APH1B-208ENST00000560353 PDZD11Q5EBL8 140 aa5.76□□□□□ -1.49
APH1B-208ENST00000560353 RNASE7Q9H1E1 156 aaKnown RBP5.76□□□□□ -1.49
APH1B-208ENST00000560353 IGHV3OR16-9A0A0B4J2B5 98 aa5.75□□□□□ -1.49
APH1B-208ENST00000560353 HSBP1L1C9JCN9 74 aa5.75□□□□□ -1.49
APH1B-208ENST00000560353 PNRC1Q12796 327 aaPredicted RBP5.75□□□□□ -1.49
APH1B-208ENST00000560353 KRTAP15-1Q3LI76 137 aa5.75□□□□□ -1.49
APH1B-208ENST00000560353 TMEM18Q96B42 140 aa5.75□□□□□ -1.49
APH1B-208ENST00000560353 TP73-AS1Q9UF72 201 aa5.75□□□□□ -1.49
APH1B-208ENST00000560353 UBE2D4Q9Y2X8 147 aa5.75□□□□□ -1.49
APH1B-208ENST00000560353 TRBV27A0A0K0K1C4 114 aa5.74□□□□□ -1.49
APH1B-208ENST00000560353 TNFRSF6BO95407 300 aa5.74□□□□□ -1.49
APH1B-208ENST00000560353 PPBPP02775 128 aa5.74□□□□□ -1.49
APH1B-208ENST00000560353 COL5A1-AS1Q5SY13 56 aa5.74□□□□□ -1.49
APH1B-208ENST00000560353 MRPL55Q7Z7F7 128 aaKnown RBP5.74□□□□□ -1.49
APH1B-208ENST00000560353 MIEN1Q9BRT3 115 aa5.74□□□□□ -1.49
APH1B-208ENST00000560353 UBE2AP49459 152 aa5.73□□□□□ -1.49
APH1B-208ENST00000560353 POLR2KP53803 58 aaKnown RBP5.73□□□□□ -1.49
APH1B-208ENST00000560353 FOXA3P55318 350 aaPredicted RBP5.73□□□□□ -1.49
APH1B-208ENST00000560353 KIAA0087Q14695 138 aa5.73□□□□□ -1.49
APH1B-208ENST00000560353 CENPWQ5EE01 88 aa5.73□□□□□ -1.49
APH1B-208ENST00000560353 KRTAP13-1Q8IUC0 172 aa5.73□□□□□ -1.49
APH1B-208ENST00000560353 DAND5Q8N907 189 aa5.73□□□□□ -1.49
APH1B-208ENST00000560353 FCER1GP30273 86 aa5.72□□□□□ -1.49
APH1B-208ENST00000560353 Q6ZUT4 128 aa5.72□□□□□ -1.49
APH1B-208ENST00000560353 TIMM21Q9BVV7 248 aa5.72□□□□□ -1.49
APH1B-208ENST00000560353 C20orf202A1L168 122 aa5.71□□□□□ -1.5
APH1B-208ENST00000560353 RPL37AP8A6NKH3 93 aa5.71□□□□□ -1.5
APH1B-208ENST00000560353 VCYO14598 125 aa5.71□□□□□ -1.5
APH1B-208ENST00000560353 C2orf82Q6UX34 121 aa5.71□□□□□ -1.5
APH1B-208ENST00000560353 SMIM12Q96EX1 92 aa5.71□□□□□ -1.5
APH1B-208ENST00000560353 SYNE2Q8WXH0 6885 aaKnown RBP5.7□□□□□ -1.5
APH1B-208ENST00000560353 CCL20P78556 96 aa5.7□□□□□ -1.5
APH1B-208ENST00000560353 UBE2V1Q13404 147 aa5.7□□□□□ -1.5
APH1B-208ENST00000560353 TEX43Q6ZNM6 134 aa5.7□□□□□ -1.5
APH1B-208ENST00000560353 LINC01551Q86U37 167 aa5.7□□□□□ -1.5
APH1B-208ENST00000560353 C3orf22Q8N5N4 141 aa5.7□□□□□ -1.5
APH1B-208ENST00000560353 FAM213BQ8TBF2 198 aa5.7□□□□□ -1.5
APH1B-208ENST00000560353 KIR2DL4Q99706 377 aa5.7□□□□□ -1.5
APH1B-208ENST00000560353 XAGE1AQ9HD64 81 aa5.7□□□□□ -1.5
APH1B-208ENST00000560353 NDUFA12Q9UI09 145 aa5.7□□□□□ -1.5
APH1B-208ENST00000560353 SCGB1D1O95968 90 aa5.69□□□□□ -1.5
APH1B-208ENST00000560353 GNG4P50150 75 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms