RNA–Protein interactions for RNA: ENST00000560243.5

RABGGTA-216, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 704 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-216ENST00000560243 GEMIN7Q9H840 131 aaKnown RBP7.21□□□□□ -1.26
RABGGTA-216ENST00000560243 SMCO4Q9NRQ5 59 aa7.21□□□□□ -1.26
RABGGTA-216ENST00000560243 TRBV30A0A0K0K1B3 111 aa7.2□□□□□ -1.26
RABGGTA-216ENST00000560243 PMCHL1Q16048 86 aa7.2□□□□□ -1.26
RABGGTA-216ENST00000560243 LINC00469Q8N7U9 141 aa7.2□□□□□ -1.26
RABGGTA-216ENST00000560243 PRSS2P07478 247 aa7.19□□□□□ -1.26
RABGGTA-216ENST00000560243 SEC11AP67812 179 aa7.19□□□□□ -1.26
RABGGTA-216ENST00000560243 C6orf226Q5I0X4 101 aa7.19□□□□□ -1.26
RABGGTA-216ENST00000560243 FAM19A5Q7Z5A7 132 aaPredicted RBP7.19□□□□□ -1.26
RABGGTA-216ENST00000560243 KRTAP11-1Q8IUC1 163 aa7.19□□□□□ -1.26
RABGGTA-216ENST00000560243 Q8IZM0 81 aa7.19□□□□□ -1.26
RABGGTA-216ENST00000560243 PACRGQ96M98 296 aaPredicted RBP7.19□□□□□ -1.26
RABGGTA-216ENST00000560243 PSORS1C2Q9UIG4 136 aa7.19□□□□□ -1.26
RABGGTA-216ENST00000560243 TNXBP22105 4242 aa7.19□□□□□ -1.26
RABGGTA-216ENST00000560243 HMCN2Q8NDA2 5059 aa7.19□□□□□ -1.26
RABGGTA-216ENST00000560243 IGLV5-45A0A087WSX0 123 aa7.18□□□□□ -1.26
RABGGTA-216ENST00000560243 TINCRA0A1B0GVN0 87 aa7.18□□□□□ -1.26
RABGGTA-216ENST00000560243 LINC01549A6NIU2 74 aa7.18□□□□□ -1.26
RABGGTA-216ENST00000560243 SMIM1B2RUZ4 78 aa7.18□□□□□ -1.26
RABGGTA-216ENST00000560243 NDUFC2-KCTD14E9PQ53 114 aa7.18□□□□□ -1.26
RABGGTA-216ENST00000560243 LINC00614P0C842 121 aa7.18□□□□□ -1.26
RABGGTA-216ENST00000560243 CKS1BP61024 79 aa7.18□□□□□ -1.26
RABGGTA-216ENST00000560243 SRSF9Q13242 221 aaKnown RBP eCLIP7.18□□□□□ -1.26
RABGGTA-216ENST00000560243 PMVKQ15126 192 aa7.18□□□□□ -1.26
RABGGTA-216ENST00000560243 C9orf129Q5T035 196 aaKnown RBP7.18□□□□□ -1.26
RABGGTA-216ENST00000560243 SPINK8P0C7L1 97 aa7.17□□□□□ -1.26
RABGGTA-216ENST00000560243 CBLN2Q8IUK8 224 aa7.17□□□□□ -1.26
RABGGTA-216ENST00000560243 SLC7A5P1Q8MH63 180 aa7.16□□□□□ -1.26
RABGGTA-216ENST00000560243 F8VRH5 84 aa7.15□□□□□ -1.26
RABGGTA-216ENST00000560243 HBDP02042 147 aa7.15□□□□□ -1.26
RABGGTA-216ENST00000560243 NDUFA6P56556 154 aa7.15□□□□□ -1.26
RABGGTA-216ENST00000560243 PDZD11Q5EBL8 140 aa7.15□□□□□ -1.26
RABGGTA-216ENST00000560243 SPINK6Q6UWN8 80 aa7.15□□□□□ -1.26
RABGGTA-216ENST00000560243 COX7B2Q8TF08 81 aa7.15□□□□□ -1.26
RABGGTA-216ENST00000560243 XAGE1AQ9HD64 81 aa7.15□□□□□ -1.26
RABGGTA-216ENST00000560243 M0QXV9 152 aa7.14□□□□□ -1.27
RABGGTA-216ENST00000560243 ODF1Q14990 250 aa7.14□□□□□ -1.27
RABGGTA-216ENST00000560243 C1orf137Q5JT78 98 aa7.14□□□□□ -1.27
RABGGTA-216ENST00000560243 SERTAD4-AS1Q5TG53 156 aa7.14□□□□□ -1.27
RABGGTA-216ENST00000560243 IGLC3P0DOY3 106 aa7.13□□□□□ -1.27
RABGGTA-216ENST00000560243 LINC01600Q96MT4 127 aa7.13□□□□□ -1.27
RABGGTA-216ENST00000560243 ZNF22P17026 224 aaPredicted RBP7.12□□□□□ -1.27
RABGGTA-216ENST00000560243 RAB5BP61020 215 aa7.12□□□□□ -1.27
RABGGTA-216ENST00000560243 IGLV5-39A0A0G2JS06 123 aa7.11□□□□□ -1.27
RABGGTA-216ENST00000560243 C11orf86A6NJI1 115 aa7.11□□□□□ -1.27
RABGGTA-216ENST00000560243 CXCL5P42830 114 aa7.11□□□□□ -1.27
RABGGTA-216ENST00000560243 BAGE3Q86Y29 109 aa7.11□□□□□ -1.27
RABGGTA-216ENST00000560243 H3BRM9 83 aa7.1□□□□□ -1.27
RABGGTA-216ENST00000560243 ATP5LO75964 103 aa7.1□□□□□ -1.27
RABGGTA-216ENST00000560243 IGLV7-43P04211 117 aa7.1□□□□□ -1.27
RABGGTA-216ENST00000560243 UBE2BP63146 152 aa7.1□□□□□ -1.27
RABGGTA-216ENST00000560243 REG3GQ6UW15 175 aa7.1□□□□□ -1.27
RABGGTA-216ENST00000560243 TRGC2P03986 189 aa7.09□□□□□ -1.27
RABGGTA-216ENST00000560243 KRTAP10-8P60410 259 aa7.09□□□□□ -1.27
RABGGTA-216ENST00000560243 CHCHD1Q96BP2 118 aaKnown RBP7.09□□□□□ -1.27
RABGGTA-216ENST00000560243 C22orf24Q9Y442 160 aa7.09□□□□□ -1.27
RABGGTA-216ENST00000560243 FAM19A2Q8N3H0 131 aa7.08□□□□□ -1.28
RABGGTA-216ENST00000560243 LINC00310P59036 64 aa7.07□□□□□ -1.28
RABGGTA-216ENST00000560243 TMEM170BQ5T4T1 132 aa7.07□□□□□ -1.28
RABGGTA-216ENST00000560243 PLA2G2DQ9UNK4 145 aa7.07□□□□□ -1.28
RABGGTA-216ENST00000560243 CHTOPQ9Y3Y2 248 aaKnown RBP7.07□□□□□ -1.28
RABGGTA-216ENST00000560243 PFN2P35080 140 aa7.06□□□□□ -1.28
RABGGTA-216ENST00000560243 IFI27L1Q96BM0 104 aa7.06□□□□□ -1.28
RABGGTA-216ENST00000560243 COLCA2A8K830 154 aa7.05□□□□□ -1.28
RABGGTA-216ENST00000560243 HSBP1O75506 76 aa7.05□□□□□ -1.28
RABGGTA-216ENST00000560243 MRPL55Q7Z7F7 128 aaKnown RBP7.05□□□□□ -1.28
RABGGTA-216ENST00000560243 DIRC1Q969H9 104 aa7.05□□□□□ -1.28
RABGGTA-216ENST00000560243 ZNF625Q96I27 306 aaPredicted RBP7.05□□□□□ -1.28
RABGGTA-216ENST00000560243 UBR4Q5T4S7 5183 aa7.04□□□□□ -1.28
RABGGTA-216ENST00000560243 TRAV12-1A0A0B4J245 112 aa7.04□□□□□ -1.28
RABGGTA-216ENST00000560243 GAGE10A6NGK3 116 aa7.04□□□□□ -1.28
RABGGTA-216ENST00000560243 RPL37AP8A6NKH3 93 aa7.04□□□□□ -1.28
RABGGTA-216ENST00000560243 H0Y9J4 135 aa7.04□□□□□ -1.28
RABGGTA-216ENST00000560243 SERF1AO75920 110 aa7.04□□□□□ -1.28
RABGGTA-216ENST00000560243 LBHQ53QV2 105 aaPredicted RBP7.04□□□□□ -1.28
RABGGTA-216ENST00000560243 LINC00167Q96N53 147 aa7.04□□□□□ -1.28
RABGGTA-216ENST00000560243 TP73-AS1Q9UF72 201 aa7.04□□□□□ -1.28
RABGGTA-216ENST00000560243 TMEM223A0PJW6 202 aa7.03□□□□□ -1.28
RABGGTA-216ENST00000560243 NUPR1O60356 82 aa7.03□□□□□ -1.28
RABGGTA-216ENST00000560243 SCO1O75880 301 aa7.03□□□□□ -1.28
RABGGTA-216ENST00000560243 ERG28Q9UKR5 140 aa7.03□□□□□ -1.28
RABGGTA-216ENST00000560243 IGLV5-37A0A075B6J1 123 aa7.02□□□□□ -1.29
RABGGTA-216ENST00000560243 H0Y8G0 127 aa7.02□□□□□ -1.29
RABGGTA-216ENST00000560243 KRTAP1-4P0C5Y4 121 aa7.02□□□□□ -1.29
RABGGTA-216ENST00000560243 PRR26Q8N8Z3 221 aa7.02□□□□□ -1.29
RABGGTA-216ENST00000560243 SND1-IT1Q9HBX3 110 aa7.02□□□□□ -1.29
RABGGTA-216ENST00000560243 Q8NDZ9 215 aa7.01□□□□□ -1.29
RABGGTA-216ENST00000560243 ZNF861PO60384 105 aa7□□□□□ -1.29
RABGGTA-216ENST00000560243 LEPROTL1O95214 131 aa6.99□□□□□ -1.29
RABGGTA-216ENST00000560243 VPREB1P12018 145 aa6.99□□□□□ -1.29
RABGGTA-216ENST00000560243 FABP4P15090 132 aa6.99□□□□□ -1.29
RABGGTA-216ENST00000560243 COX17Q14061 63 aa6.99□□□□□ -1.29
RABGGTA-216ENST00000560243 NKAPP1Q8N9T2 125 aa6.99□□□□□ -1.29
RABGGTA-216ENST00000560243 LRP2P98164 4655 aa6.98□□□□□ -1.29
RABGGTA-216ENST00000560243 IGKV2-28A0A075B6P5 120 aa6.98□□□□□ -1.29
RABGGTA-216ENST00000560243 A0A0U1RRA0 63 aa6.98□□□□□ -1.29
RABGGTA-216ENST00000560243 BCE1O60756 84 aa6.98□□□□□ -1.29
RABGGTA-216ENST00000560243 IGKV2D-28P01615 120 aa6.98□□□□□ -1.29
RABGGTA-216ENST00000560243 LINC00158P58513 81 aa6.97□□□□□ -1.29
RABGGTA-216ENST00000560243 SFTA2Q6UW10 78 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms