RNA–Protein interactions for RNA: ENST00000560127.1

RABGGTA-213, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 4

Gene RABGGTA, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-213ENST00000560127 C2orf48Q96LS8 159 aa7.56□□□□□ -1.2
RABGGTA-213ENST00000560127 COX7A2LO14548 114 aa7.55□□□□□ -1.2
RABGGTA-213ENST00000560127 RNF151Q2KHN1 245 aa7.55□□□□□ -1.2
RABGGTA-213ENST00000560127 LINC00242Q5T6M2 205 aa7.55□□□□□ -1.2
RABGGTA-213ENST00000560127 TOMM6Q96B49 74 aa7.55□□□□□ -1.2
RABGGTA-213ENST00000560127 KRTAP7-1Q8IUC3 87 aa7.54□□□□□ -1.2
RABGGTA-213ENST00000560127 TRAPPC1Q9Y5R8 145 aa7.54□□□□□ -1.2
RABGGTA-213ENST00000560127 FAM19A5Q7Z5A7 132 aaPredicted RBP7.53□□□□□ -1.2
RABGGTA-213ENST00000560127 FAM19A3Q7Z5A8 133 aa7.53□□□□□ -1.2
RABGGTA-213ENST00000560127 TIMM17AQ99595 171 aa7.53□□□□□ -1.2
RABGGTA-213ENST00000560127 NPSP0C0P6 89 aa7.51□□□□□ -1.21
RABGGTA-213ENST00000560127 SPAG11BQ08648 103 aa7.51□□□□□ -1.21
RABGGTA-213ENST00000560127 TEX43Q6ZNM6 134 aa7.51□□□□□ -1.21
RABGGTA-213ENST00000560127 SMCO4Q9NRQ5 59 aa7.51□□□□□ -1.21
RABGGTA-213ENST00000560127 MRPL35Q9NZE8 188 aaKnown RBP7.51□□□□□ -1.21
RABGGTA-213ENST00000560127 A0A087X002 238 aa7.5□□□□□ -1.21
RABGGTA-213ENST00000560127 KIAA0087Q14695 138 aa7.5□□□□□ -1.21
RABGGTA-213ENST00000560127 PMCHL1Q16048 86 aa7.5□□□□□ -1.21
RABGGTA-213ENST00000560127 C10orf25Q5T742 122 aa7.5□□□□□ -1.21
RABGGTA-213ENST00000560127 FA2HQ7L5A8 372 aa7.5□□□□□ -1.21
RABGGTA-213ENST00000560127 ERASQ7Z444 233 aa7.5□□□□□ -1.21
RABGGTA-213ENST00000560127 RETNLBQ9BQ08 111 aa7.5□□□□□ -1.21
RABGGTA-213ENST00000560127 CDIP1Q9H305 208 aa7.5□□□□□ -1.21
RABGGTA-213ENST00000560127 M0QXV9 152 aa7.49□□□□□ -1.21
RABGGTA-213ENST00000560127 SCO1O75880 301 aa7.49□□□□□ -1.21
RABGGTA-213ENST00000560127 TLX1NBP0CAT3 122 aa7.49□□□□□ -1.21
RABGGTA-213ENST00000560127 LINC00310P59036 64 aa7.49□□□□□ -1.21
RABGGTA-213ENST00000560127 UBE2BP63146 152 aa7.49□□□□□ -1.21
RABGGTA-213ENST00000560127 ORAOV1Q8WV07 137 aa7.49□□□□□ -1.21
RABGGTA-213ENST00000560127 COLCA2A8K830 154 aa7.48□□□□□ -1.21
RABGGTA-213ENST00000560127 ZNF861PO60384 105 aa7.48□□□□□ -1.21
RABGGTA-213ENST00000560127 TPRXLQ17RH7 258 aa7.48□□□□□ -1.21
RABGGTA-213ENST00000560127 PDZD11Q5EBL8 140 aa7.48□□□□□ -1.21
RABGGTA-213ENST00000560127 OR10D4PQ8NGN7 298 aa7.48□□□□□ -1.21
RABGGTA-213ENST00000560127 SCGB3A1Q96QR1 104 aa7.48□□□□□ -1.21
RABGGTA-213ENST00000560127 VCX2Q9H322 139 aa7.48□□□□□ -1.21
RABGGTA-213ENST00000560127 LINC00614P0C842 121 aa7.47□□□□□ -1.21
RABGGTA-213ENST00000560127 GAGE2EQ4V326 116 aa7.47□□□□□ -1.21
RABGGTA-213ENST00000560127 Q6ZN92 141 aa7.47□□□□□ -1.21
RABGGTA-213ENST00000560127 C2orf88Q9BSF0 95 aa7.47□□□□□ -1.21
RABGGTA-213ENST00000560127 GAGE2DQ9UEU5 116 aa7.47□□□□□ -1.21
RABGGTA-213ENST00000560127 CDKN2A-AS1Q9UH64 79 aa7.47□□□□□ -1.21
RABGGTA-213ENST00000560127 IGLV5-45A0A087WSX0 123 aa7.46□□□□□ -1.22
RABGGTA-213ENST00000560127 TRGC2P03986 189 aa7.46□□□□□ -1.22
RABGGTA-213ENST00000560127 UNQ6190/PRO20217Q6UXQ8 127 aa7.46□□□□□ -1.22
RABGGTA-213ENST00000560127 TYMSOSQ8TAI1 123 aa7.46□□□□□ -1.22
RABGGTA-213ENST00000560127 CST9LQ9H4G1 147 aa7.46□□□□□ -1.22
RABGGTA-213ENST00000560127 C6orf48Q9UBA6 75 aa7.46□□□□□ -1.22
RABGGTA-213ENST00000560127 NDUFA1O15239 70 aa7.45□□□□□ -1.22
RABGGTA-213ENST00000560127 LINC01561Q8N1V8 128 aa7.45□□□□□ -1.22
RABGGTA-213ENST00000560127 SMIM1B2RUZ4 78 aa7.44□□□□□ -1.22
RABGGTA-213ENST00000560127 F8WDY8 70 aa7.44□□□□□ -1.22
RABGGTA-213ENST00000560127 HBDP02042 147 aa7.44□□□□□ -1.22
RABGGTA-213ENST00000560127 G0S2P27469 103 aa7.44□□□□□ -1.22
RABGGTA-213ENST00000560127 LINC01547P58512 204 aaPredicted RBP7.44□□□□□ -1.22
RABGGTA-213ENST00000560127 C2orf82Q6UX34 121 aa7.44□□□□□ -1.22
RABGGTA-213ENST00000560127 IGLV7-46A0A075B6I9 117 aa7.43□□□□□ -1.22
RABGGTA-213ENST00000560127 TINCRA0A1B0GVN0 87 aa7.43□□□□□ -1.22
RABGGTA-213ENST00000560127 CRYGAP11844 174 aa7.43□□□□□ -1.22
RABGGTA-213ENST00000560127 HERVK_113P63121 156 aa7.43□□□□□ -1.22
RABGGTA-213ENST00000560127 PMVKQ15126 192 aa7.43□□□□□ -1.22
RABGGTA-213ENST00000560127 PAPPA-AS1Q5QFB9 102 aa7.43□□□□□ -1.22
RABGGTA-213ENST00000560127 LINC01549A6NIU2 74 aa7.42□□□□□ -1.22
RABGGTA-213ENST00000560127 NUPR1O60356 82 aa7.42□□□□□ -1.22
RABGGTA-213ENST00000560127 C9orf129Q5T035 196 aaKnown RBP7.42□□□□□ -1.22
RABGGTA-213ENST00000560127 IGLC3P0DOY3 106 aa7.41□□□□□ -1.22
RABGGTA-213ENST00000560127 LINC00469Q8N7U9 141 aa7.41□□□□□ -1.22
RABGGTA-213ENST00000560127 CHCHD1Q96BP2 118 aaKnown RBP7.41□□□□□ -1.22
RABGGTA-213ENST00000560127 SERF1AO75920 110 aa7.4□□□□□ -1.22
RABGGTA-213ENST00000560127 ZNF22P17026 224 aaPredicted RBP7.4□□□□□ -1.22
RABGGTA-213ENST00000560127 KRTAP13-2Q52LG2 175 aa7.4□□□□□ -1.22
RABGGTA-213ENST00000560127 Q8IZM0 81 aa7.4□□□□□ -1.22
RABGGTA-213ENST00000560127 FAM19A2Q8N3H0 131 aa7.4□□□□□ -1.22
RABGGTA-213ENST00000560127 GEMIN7Q9H840 131 aaKnown RBP7.4□□□□□ -1.22
RABGGTA-213ENST00000560127 ANAPC11Q9NYG5 84 aa7.4□□□□□ -1.22
RABGGTA-213ENST00000560127 C11orf86A6NJI1 115 aa7.39□□□□□ -1.23
RABGGTA-213ENST00000560127 SPINK8P0C7L1 97 aa7.39□□□□□ -1.23
RABGGTA-213ENST00000560127 RAB5BP61020 215 aa7.39□□□□□ -1.23
RABGGTA-213ENST00000560127 SEC11AP67812 179 aa7.39□□□□□ -1.23
RABGGTA-213ENST00000560127 IGLV5-39A0A0G2JS06 123 aa7.38□□□□□ -1.23
RABGGTA-213ENST00000560127 LINC00304Q8N9R0 145 aa7.38□□□□□ -1.23
RABGGTA-213ENST00000560127 KRTAP4-1Q9BYQ7 146 aa7.38□□□□□ -1.23
RABGGTA-213ENST00000560127 TOMM7Q9P0U1 55 aa7.38□□□□□ -1.23
RABGGTA-213ENST00000560127 TRBV30A0A0K0K1B3 111 aa7.37□□□□□ -1.23
RABGGTA-213ENST00000560127 NDUFC2-KCTD14E9PQ53 114 aa7.37□□□□□ -1.23
RABGGTA-213ENST00000560127 ATP5LO75964 103 aa7.37□□□□□ -1.23
RABGGTA-213ENST00000560127 RPL28P46779 137 aaKnown RBP7.36□□□□□ -1.23
RABGGTA-213ENST00000560127 NDUFA6P56556 154 aa7.36□□□□□ -1.23
RABGGTA-213ENST00000560127 BAGE3Q86Y29 109 aa7.36□□□□□ -1.23
RABGGTA-213ENST00000560127 COX7B2Q8TF08 81 aa7.36□□□□□ -1.23
RABGGTA-213ENST00000560127 PPDPFQ9H3Y8 114 aa7.36□□□□□ -1.23
RABGGTA-213ENST00000560127 C22orf24Q9Y442 160 aa7.36□□□□□ -1.23
RABGGTA-213ENST00000560127 HIST1H2BKO60814 126 aa7.35□□□□□ -1.23
RABGGTA-213ENST00000560127 HSBP1O75506 76 aa7.35□□□□□ -1.23
RABGGTA-213ENST00000560127 HIST1H2BJP06899 126 aa7.35□□□□□ -1.23
RABGGTA-213ENST00000560127 HIST1H2BOP23527 126 aa7.35□□□□□ -1.23
RABGGTA-213ENST00000560127 HIST1H2BBP33778 126 aa7.35□□□□□ -1.23
RABGGTA-213ENST00000560127 HIST1H2BDP58876 126 aa7.35□□□□□ -1.23
RABGGTA-213ENST00000560127 HIST1H2BCP62807 126 aa7.35□□□□□ -1.23
RABGGTA-213ENST00000560127 HIST2H2BEQ16778 126 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 232.8 ms