RNA–Protein interactions for RNA: ENST00000559941.1

CHRNA3-207, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 4

Gene CHRNA3, Length 592 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-207ENST00000559941 C6orf226Q5I0X4 101 aa12.49□□□□□ -0.41
CHRNA3-207ENST00000559941 C9orf129Q5T035 196 aaKnown RBP12.49□□□□□ -0.41
CHRNA3-207ENST00000559941 CDKN2A-AS1Q9UH64 79 aa12.49□□□□□ -0.41
CHRNA3-207ENST00000559941 LINC01546A6NGU7 62 aa12.48□□□□□ -0.41
CHRNA3-207ENST00000559941 SCGB3A1Q96QR1 104 aa12.48□□□□□ -0.41
CHRNA3-207ENST00000559941 ALKBH7Q9BT30 221 aaPredicted RBP12.48□□□□□ -0.41
CHRNA3-207ENST00000559941 GEMIN7Q9H840 131 aaKnown RBP12.48□□□□□ -0.41
CHRNA3-207ENST00000559941 M0QXV9 152 aa12.47□□□□□ -0.41
CHRNA3-207ENST00000559941 COX19Q49B96 90 aa12.47□□□□□ -0.41
CHRNA3-207ENST00000559941 LINC01549A6NIU2 74 aa12.46□□□□□ -0.41
CHRNA3-207ENST00000559941 COMMD7Q86VX2 200 aa12.46□□□□□ -0.41
CHRNA3-207ENST00000559941 LRP2P98164 4655 aa12.45□□□□□ -0.42
CHRNA3-207ENST00000559941 C10orf91Q5T1B1 145 aa12.45□□□□□ -0.42
CHRNA3-207ENST00000559941 DIRC1Q969H9 104 aa12.45□□□□□ -0.42
CHRNA3-207ENST00000559941 UBE2BP63146 152 aa12.44□□□□□ -0.42
CHRNA3-207ENST00000559941 TINCRA0A1B0GVN0 87 aa12.42□□□□□ -0.42
CHRNA3-207ENST00000559941 F8VRH5 84 aa12.42□□□□□ -0.42
CHRNA3-207ENST00000559941 LINC00469Q8N7U9 141 aa12.42□□□□□ -0.42
CHRNA3-207ENST00000559941 MRPL18Q9H0U6 180 aaKnown RBP12.42□□□□□ -0.42
CHRNA3-207ENST00000559941 IGLV5-45A0A087WSX0 123 aa12.41□□□□□ -0.42
CHRNA3-207ENST00000559941 SMIM1B2RUZ4 78 aa12.41□□□□□ -0.42
CHRNA3-207ENST00000559941 H0Y9J4 135 aa12.41□□□□□ -0.42
CHRNA3-207ENST00000559941 CXCL5P42830 114 aa12.41□□□□□ -0.42
CHRNA3-207ENST00000559941 FABP9Q0Z7S8 132 aa12.41□□□□□ -0.42
CHRNA3-207ENST00000559941 RHEBQ15382 184 aa12.41□□□□□ -0.42
CHRNA3-207ENST00000559941 CARHSP1Q9Y2V2 147 aaKnown RBP12.41□□□□□ -0.42
CHRNA3-207ENST00000559941 PDZD11Q5EBL8 140 aa12.4□□□□□ -0.42
CHRNA3-207ENST00000559941 FA2HQ7L5A8 372 aa12.4□□□□□ -0.42
CHRNA3-207ENST00000559941 CST9LQ9H4G1 147 aa12.4□□□□□ -0.42
CHRNA3-207ENST00000559941 RPS10P5Q9NQ39 176 aa12.4□□□□□ -0.42
CHRNA3-207ENST00000559941 XAGE1AQ9HD64 81 aa12.39□□□□□ -0.43
CHRNA3-207ENST00000559941 COX7B2Q8TF08 81 aa12.38□□□□□ -0.43
CHRNA3-207ENST00000559941 SMCO4Q9NRQ5 59 aa12.38□□□□□ -0.43
CHRNA3-207ENST00000559941 C22orf24Q9Y442 160 aa12.38□□□□□ -0.43
CHRNA3-207ENST00000559941 PMVKQ15126 192 aa12.37□□□□□ -0.43
CHRNA3-207ENST00000559941 PRR26Q8N8Z3 221 aa12.36□□□□□ -0.43
CHRNA3-207ENST00000559941 LBHQ53QV2 105 aaPredicted RBP12.35□□□□□ -0.43
CHRNA3-207ENST00000559941 KRTAP1-4P0C5Y4 121 aa12.33□□□□□ -0.44
CHRNA3-207ENST00000559941 SPINK8P0C7L1 97 aa12.33□□□□□ -0.44
CHRNA3-207ENST00000559941 TP73-AS1Q9UF72 201 aa12.33□□□□□ -0.44
CHRNA3-207ENST00000559941 NUPR1O60356 82 aa12.32□□□□□ -0.44
CHRNA3-207ENST00000559941 URB1-AS1Q96HZ7 61 aa12.32□□□□□ -0.44
CHRNA3-207ENST00000559941 TRAPPC1Q9Y5R8 145 aa12.32□□□□□ -0.44
CHRNA3-207ENST00000559941 IGLV1-50A0A075B6I6 118 aa12.31□□□□□ -0.44
CHRNA3-207ENST00000559941 A0A096LNJ9 63 aa12.31□□□□□ -0.44
CHRNA3-207ENST00000559941 C18orf32Q8TCD1 76 aa12.31□□□□□ -0.44
CHRNA3-207ENST00000559941 H3BRM9 83 aa12.3□□□□□ -0.44
CHRNA3-207ENST00000559941 ZNF861PO60384 105 aa12.3□□□□□ -0.44
CHRNA3-207ENST00000559941 LINC00614P0C842 121 aa12.3□□□□□ -0.44
CHRNA3-207ENST00000559941 MRPL55Q7Z7F7 128 aaKnown RBP12.3□□□□□ -0.44
CHRNA3-207ENST00000559941 IGLC3P0DOY3 106 aa12.29□□□□□ -0.44
CHRNA3-207ENST00000559941 HBDP02042 147 aa12.27□□□□□ -0.45
CHRNA3-207ENST00000559941 APOC3P02656 99 aa12.27□□□□□ -0.45
CHRNA3-207ENST00000559941 RAB5BP61020 215 aa12.27□□□□□ -0.45
CHRNA3-207ENST00000559941 NDUFA6P56556 154 aa12.26□□□□□ -0.45
CHRNA3-207ENST00000559941 LINC00167Q96N53 147 aa12.26□□□□□ -0.45
CHRNA3-207ENST00000559941 IGLV5-39A0A0G2JS06 123 aa12.25□□□□□ -0.45
CHRNA3-207ENST00000559941 ZNF22P17026 224 aaPredicted RBP12.25□□□□□ -0.45
CHRNA3-207ENST00000559941 IGLV5-37A0A075B6J1 123 aa12.24□□□□□ -0.45
CHRNA3-207ENST00000559941 ATP5LO75964 103 aa12.24□□□□□ -0.45
CHRNA3-207ENST00000559941 BCE1O60756 84 aa12.23□□□□□ -0.45
CHRNA3-207ENST00000559941 SNAPINO95295 136 aa12.23□□□□□ -0.45
CHRNA3-207ENST00000559941 RPL13AP40429 203 aaKnown RBP12.23□□□□□ -0.45
CHRNA3-207ENST00000559941 PMCHL1Q16048 86 aa12.23□□□□□ -0.45
CHRNA3-207ENST00000559941 NDUFA5Q16718 116 aa12.22□□□□□ -0.45
CHRNA3-207ENST00000559941 SVBPQ8N300 66 aa12.22□□□□□ -0.45
CHRNA3-207ENST00000559941 RPL37AP8A6NKH3 93 aa12.21□□□□□ -0.45
CHRNA3-207ENST00000559941 RPL28P46779 137 aaKnown RBP12.21□□□□□ -0.45
CHRNA3-207ENST00000559941 LPAP08519 4548 aa12.2□□□□□ -0.46
CHRNA3-207ENST00000559941 NKAPP1Q8N9T2 125 aa12.2□□□□□ -0.46
CHRNA3-207ENST00000559941 RNF213Q63HN8 5207 aa12.19□□□□□ -0.46
CHRNA3-207ENST00000559941 GAGE10A6NGK3 116 aa12.19□□□□□ -0.46
CHRNA3-207ENST00000559941 PFN2P35080 140 aa12.19□□□□□ -0.46
CHRNA3-207ENST00000559941 BAGE3Q86Y29 109 aa12.19□□□□□ -0.46
CHRNA3-207ENST00000559941 C11orf86A6NJI1 115 aa12.18□□□□□ -0.46
CHRNA3-207ENST00000559941 YPEL4Q96NS1 127 aa12.17□□□□□ -0.46
CHRNA3-207ENST00000559941 ERG28Q9UKR5 140 aa12.17□□□□□ -0.46
CHRNA3-207ENST00000559941 COX17Q14061 63 aa12.16□□□□□ -0.46
CHRNA3-207ENST00000559941 TMEM170BQ5T4T1 132 aa12.15□□□□□ -0.46
CHRNA3-207ENST00000559941 SND1-IT1Q9HBX3 110 aa12.15□□□□□ -0.46
CHRNA3-207ENST00000559941 SCO1O75880 301 aa12.13□□□□□ -0.47
CHRNA3-207ENST00000559941 VPREB1P12018 145 aa12.13□□□□□ -0.47
CHRNA3-207ENST00000559941 SFTA2Q6UW10 78 aa12.13□□□□□ -0.47
CHRNA3-207ENST00000559941 KRTAP13-1Q8IUC0 172 aa12.13□□□□□ -0.47
CHRNA3-207ENST00000559941 CHCHD1Q96BP2 118 aaKnown RBP12.13□□□□□ -0.47
CHRNA3-207ENST00000559941 ZNF625Q96I27 306 aaPredicted RBP12.13□□□□□ -0.47
CHRNA3-207ENST00000559941 CHTOPQ9Y3Y2 248 aaKnown RBP12.13□□□□□ -0.47
CHRNA3-207ENST00000559941 IGKV2-28A0A075B6P5 120 aa12.11□□□□□ -0.47
CHRNA3-207ENST00000559941 A0A087X002 238 aa12.11□□□□□ -0.47
CHRNA3-207ENST00000559941 TRAV12-1A0A0B4J245 112 aa12.11□□□□□ -0.47
CHRNA3-207ENST00000559941 IGKV2D-28P01615 120 aa12.11□□□□□ -0.47
CHRNA3-207ENST00000559941 UBE2AP49459 152 aa12.1□□□□□ -0.47
CHRNA3-207ENST00000559941 RPL24P83731 157 aaKnown RBP12.1□□□□□ -0.47
CHRNA3-207ENST00000559941 IFI27L1Q96BM0 104 aa12.1□□□□□ -0.47
CHRNA3-207ENST00000559941 CRYGAP11844 174 aa12.09□□□□□ -0.47
CHRNA3-207ENST00000559941 TMEM223A0PJW6 202 aa12.08□□□□□ -0.48
CHRNA3-207ENST00000559941 Q8NDZ9 215 aa12.07□□□□□ -0.48
CHRNA3-207ENST00000559941 TYMSOSQ8TAI1 123 aa12.05□□□□□ -0.48
CHRNA3-207ENST00000559941 TMEM126AQ9H061 195 aa12.05□□□□□ -0.48
CHRNA3-207ENST00000559941 TMEM238C9JI98 176 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms