RNA–Protein interactions for RNA: ENST00000559844.5

SNX1-208, Transcript of sorting nexin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX1, Length 1,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-208ENST00000559844 DEFB131BA0A096LNP1 70 aa12.17□□□□□ -0.46
SNX1-208ENST00000559844 XCL1P47992 114 aa12.17□□□□□ -0.46
SNX1-208ENST00000559844 LINC00269Q8N2A0 174 aa12.17□□□□□ -0.46
SNX1-208ENST00000559844 DAND5Q8N907 189 aa12.17□□□□□ -0.46
SNX1-208ENST00000559844 TRAV10A0A0B4J240 114 aa12.16□□□□□ -0.46
SNX1-208ENST00000559844 PSMB2P49721 201 aa12.16□□□□□ -0.46
SNX1-208ENST00000559844 REG3AQ06141 175 aa12.16□□□□□ -0.46
SNX1-208ENST00000559844 Q1RN00 199 aa12.16□□□□□ -0.46
SNX1-208ENST00000559844 CLPSL2Q6UWE3 100 aa12.16□□□□□ -0.46
SNX1-208ENST00000559844 SCGB1C2P0DMR2 95 aa12.15□□□□□ -0.46
SNX1-208ENST00000559844 CD164L2Q6UWJ8 174 aa12.15□□□□□ -0.46
SNX1-208ENST00000559844 OCIAD2Q56VL3 154 aa12.14□□□□□ -0.47
SNX1-208ENST00000559844 MUC7Q8TAX7 377 aa12.14□□□□□ -0.47
SNX1-208ENST00000559844 A0A0U1RRA0 63 aa12.14□□□□□ -0.47
SNX1-208ENST00000559844 LYPD5Q6UWN5 251 aa12.14□□□□□ -0.47
SNX1-208ENST00000559844 Q8IZM0 81 aa12.13□□□□□ -0.47
SNX1-208ENST00000559844 CHCHD10Q8WYQ3 142 aaPredicted RBP12.13□□□□□ -0.47
SNX1-208ENST00000559844 DNAH7Q8WXX0 4024 aa12.13□□□□□ -0.47
SNX1-208ENST00000559844 TRBV30A0A0K0K1B3 111 aa12.12□□□□□ -0.47
SNX1-208ENST00000559844 H7C2G1 150 aa12.12□□□□□ -0.47
SNX1-208ENST00000559844 IBA57-AS1B1ANH7 110 aa12.12□□□□□ -0.47
SNX1-208ENST00000559844 COX7A2LO14548 114 aa12.12□□□□□ -0.47
SNX1-208ENST00000559844 C6orf226Q5I0X4 101 aa12.12□□□□□ -0.47
SNX1-208ENST00000559844 K7ERU9 68 aa12.11□□□□□ -0.47
SNX1-208ENST00000559844 NUPR2A6NF83 97 aa12.1□□□□□ -0.47
SNX1-208ENST00000559844 TCL1BO95988 128 aa12.1□□□□□ -0.47
SNX1-208ENST00000559844 SOSTDC1Q6X4U4 206 aa12.1□□□□□ -0.47
SNX1-208ENST00000559844 Q8N3U1 123 aa12.1□□□□□ -0.47
SNX1-208ENST00000559844 PRO0461Q9UI25 63 aa12.1□□□□□ -0.47
SNX1-208ENST00000559844 LINC00158P58513 81 aa12.09□□□□□ -0.47
SNX1-208ENST00000559844 CSMD3Q7Z407 3707 aa12.08□□□□□ -0.48
SNX1-208ENST00000559844 COX6CP09669 75 aa12.08□□□□□ -0.48
SNX1-208ENST00000559844 RPL13AP40429 203 aaKnown RBP12.08□□□□□ -0.48
SNX1-208ENST00000559844 WFDC2Q14508 124 aa12.08□□□□□ -0.48
SNX1-208ENST00000559844 MIR7-3HGQ8N6C7 128 aa12.08□□□□□ -0.48
SNX1-208ENST00000559844 PRR34Q9NV39 138 aa12.08□□□□□ -0.48
SNX1-208ENST00000559844 MALP21145 153 aa12.07□□□□□ -0.48
SNX1-208ENST00000559844 CXCL5P42830 114 aa12.07□□□□□ -0.48
SNX1-208ENST00000559844 IGLV10-54A0A075B6I4 117 aa12.07□□□□□ -0.48
SNX1-208ENST00000559844 KLK5Q9Y337 293 aaPredicted RBP12.07□□□□□ -0.48
SNX1-208ENST00000559844 TRIAP1O43715 76 aa12.06□□□□□ -0.48
SNX1-208ENST00000559844 ATXN8Q156A1 80 aa12.06□□□□□ -0.48
SNX1-208ENST00000559844 CFAP161Q6P656 301 aa12.06□□□□□ -0.48
SNX1-208ENST00000559844 CKS1BP61024 79 aa12.05□□□□□ -0.48
SNX1-208ENST00000559844 FOXI1Q12951 378 aa12.05□□□□□ -0.48
SNX1-208ENST00000559844 KLK12Q9UKR0 248 aa12.05□□□□□ -0.48
SNX1-208ENST00000559844 CRPP02741 224 aa12.04□□□□□ -0.48
SNX1-208ENST00000559844 TRAV8-4A0A0B4J246 113 aa12.03□□□□□ -0.48
SNX1-208ENST00000559844 GAGE12HA6NDE8 117 aa12.03□□□□□ -0.48
SNX1-208ENST00000559844 C3orf84H3BNL1 204 aa12.03□□□□□ -0.48
SNX1-208ENST00000559844 KIAA0087Q14695 138 aa12.03□□□□□ -0.48
SNX1-208ENST00000559844 CASC10Q5T4H9 136 aa12.03□□□□□ -0.48
SNX1-208ENST00000559844 MTURNQ8N3F0 131 aa12.03□□□□□ -0.48
SNX1-208ENST00000559844 TENM2Q9NT68 2774 aa12.02□□□□□ -0.48
SNX1-208ENST00000559844 PFN2P35080 140 aa12.02□□□□□ -0.49
SNX1-208ENST00000559844 ENHOQ6UWT2 76 aa12.02□□□□□ -0.49
SNX1-208ENST00000559844 STARD9Q9P2P6 4700 aa12.01□□□□□ -0.49
SNX1-208ENST00000559844 TRAV13-2A0A0B4J235 113 aa12.01□□□□□ -0.49
SNX1-208ENST00000559844 C15orf53Q8NAA6 179 aa12.01□□□□□ -0.49
SNX1-208ENST00000559844 SND1-IT1Q9HBX3 110 aa12.01□□□□□ -0.49
SNX1-208ENST00000559844 ETDBQ3ZM63 59 aa12.01□□□□□ -0.49
SNX1-208ENST00000559844 WFDC10BQ8IUB3 73 aa12.01□□□□□ -0.49
SNX1-208ENST00000559844 SMCPP49901 116 aaPredicted RBP12□□□□□ -0.49
SNX1-208ENST00000559844 COX17Q14061 63 aa12□□□□□ -0.49
SNX1-208ENST00000559844 CCL18P55774 89 aa11.99□□□□□ -0.49
SNX1-208ENST00000559844 ESRGQ1W209 222 aa11.99□□□□□ -0.49
SNX1-208ENST00000559844 RNF151Q2KHN1 245 aa11.99□□□□□ -0.49
SNX1-208ENST00000559844 C2orf82Q6UX34 121 aa11.99□□□□□ -0.49
SNX1-208ENST00000559844 APLNQ9ULZ1 77 aa11.99□□□□□ -0.49
SNX1-208ENST00000559844 J3QR89 54 aa11.99□□□□□ -0.49
SNX1-208ENST00000559844 M0QXV9 152 aa11.99□□□□□ -0.49
SNX1-208ENST00000559844 UBE2WQ96B02 151 aa11.99□□□□□ -0.49
SNX1-208ENST00000559844 LINC01620Q4KN68 170 aa11.98□□□□□ -0.49
SNX1-208ENST00000559844 DYNC2H1Q8NCM8 4307 aaKnown RBP11.97□□□□□ -0.49
SNX1-208ENST00000559844 C9JAW5 83 aa11.97□□□□□ -0.49
SNX1-208ENST00000559844 SLC25A20O43772 301 aa11.97□□□□□ -0.49
SNX1-208ENST00000559844 SPAG11BQ08648 103 aa11.97□□□□□ -0.49
SNX1-208ENST00000559844 CBY1Q9Y3M2 126 aa11.96□□□□□ -0.5
SNX1-208ENST00000559844 LINC01556Q5JQF7 62 aa11.95□□□□□ -0.5
SNX1-208ENST00000559844 VPS25Q9BRG1 176 aa11.95□□□□□ -0.5
SNX1-208ENST00000559844 LST1O00453 97 aa11.94□□□□□ -0.5
SNX1-208ENST00000559844 IGKV2-28A0A075B6P5 120 aa11.94□□□□□ -0.5
SNX1-208ENST00000559844 IGKV2D-28P01615 120 aa11.94□□□□□ -0.5
SNX1-208ENST00000559844 TEN1Q86WV5 123 aa11.94□□□□□ -0.5
SNX1-208ENST00000559844 TRBV10-2A0A0K0K1G8 114 aa11.93□□□□□ -0.5
SNX1-208ENST00000559844 LINC00337Q8N6G1 96 aa11.93□□□□□ -0.5
SNX1-208ENST00000559844 LINC01600Q96MT4 127 aa11.93□□□□□ -0.5
SNX1-208ENST00000559844 CLEC2BQ92478 149 aa11.92□□□□□ -0.5
SNX1-208ENST00000559844 RPL28P46779 137 aaKnown RBP11.92□□□□□ -0.5
SNX1-208ENST00000559844 ANKRD29Q8N6D5 301 aa11.92□□□□□ -0.5
SNX1-208ENST00000559844 PLECQ15149 4684 aaKnown RBP11.9□□□□□ -0.5
SNX1-208ENST00000559844 NDUFC2O95298 119 aa11.9□□□□□ -0.5
SNX1-208ENST00000559844 PPDPFLQ8WWR9 84 aa11.9□□□□□ -0.5
SNX1-208ENST00000559844 GVQW2A0A096LPI5 108 aaPredicted RBP11.88□□□□□ -0.51
SNX1-208ENST00000559844 H3BT86 120 aa11.88□□□□□ -0.51
SNX1-208ENST00000559844 DNAH10OSP0CZ25 163 aa11.88□□□□□ -0.51
SNX1-208ENST00000559844 UBE2DNLQ8IWF7 75 aa11.88□□□□□ -0.51
SNX1-208ENST00000559844 NTN5Q8WTR8 489 aaPredicted RBP11.88□□□□□ -0.51
SNX1-208ENST00000559844 LINC00588Q9Y4M8 146 aa11.88□□□□□ -0.51
SNX1-208ENST00000559844 KRTAP26-1Q6PEX3 210 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 126.5 ms