RNA–Protein interactions for RNA: ENST00000559511.5

SPG11-217, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 2

Gene SPG11, Length 2,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-217ENST00000559511 MIR7-3HGQ8N6C7 128 aa7.62□□□□□ -1.19
SPG11-217ENST00000559511 EGFEM1PQ0D2K5 195 aa7.61□□□□□ -1.19
SPG11-217ENST00000559511 PPDPFQ9H3Y8 114 aa7.61□□□□□ -1.19
SPG11-217ENST00000559511 TRBV10-2A0A0K0K1G8 114 aa7.61□□□□□ -1.19
SPG11-217ENST00000559511 LST1O00453 97 aa7.61□□□□□ -1.19
SPG11-217ENST00000559511 ATP5G1P05496 136 aa7.61□□□□□ -1.19
SPG11-217ENST00000559511 SS18Q15532 418 aa7.61□□□□□ -1.19
SPG11-217ENST00000559511 C11orf68Q9H3H3 251 aaKnown RBP7.61□□□□□ -1.19
SPG11-217ENST00000559511 LINC00269Q8N2A0 174 aa7.6□□□□□ -1.19
SPG11-217ENST00000559511 LINC01600Q96MT4 127 aa7.6□□□□□ -1.19
SPG11-217ENST00000559511 SPART-AS1P0CW21 52 aa7.6□□□□□ -1.19
SPG11-217ENST00000559511 HTN3P15516 51 aa7.6□□□□□ -1.19
SPG11-217ENST00000559511 LINC00158P58513 81 aa7.6□□□□□ -1.19
SPG11-217ENST00000559511 NTN5Q8WTR8 489 aaPredicted RBP7.6□□□□□ -1.19
SPG11-217ENST00000559511 SIGMAR1Q99720 223 aa7.6□□□□□ -1.19
SPG11-217ENST00000559511 CDIP1Q9H305 208 aa7.6□□□□□ -1.19
SPG11-217ENST00000559511 IBA57-AS1B1ANH7 110 aa7.58□□□□□ -1.2
SPG11-217ENST00000559511 PFN2P35080 140 aa7.58□□□□□ -1.2
SPG11-217ENST00000559511 DNAH3Q8TD57 4116 aa7.58□□□□□ -1.2
SPG11-217ENST00000559511 IGKV2-28A0A075B6P5 120 aa7.58□□□□□ -1.2
SPG11-217ENST00000559511 COX7A2LO14548 114 aa7.58□□□□□ -1.2
SPG11-217ENST00000559511 IGKV2D-28P01615 120 aa7.58□□□□□ -1.2
SPG11-217ENST00000559511 C6orf226Q5I0X4 101 aa7.58□□□□□ -1.2
SPG11-217ENST00000559511 C2orf82Q6UX34 121 aa7.58□□□□□ -1.2
SPG11-217ENST00000559511 LINC00337Q8N6G1 96 aa7.58□□□□□ -1.2
SPG11-217ENST00000559511 SND1-IT1Q9HBX3 110 aa7.58□□□□□ -1.2
SPG11-217ENST00000559511 IGLV10-54A0A075B6I4 117 aa7.57□□□□□ -1.2
SPG11-217ENST00000559511 TEX49A0A1B0GTD5 131 aa7.57□□□□□ -1.2
SPG11-217ENST00000559511 ANGP03950 147 aaKnown RBP7.57□□□□□ -1.2
SPG11-217ENST00000559511 CCL18P55774 89 aa7.57□□□□□ -1.2
SPG11-217ENST00000559511 REG3AQ06141 175 aa7.57□□□□□ -1.2
SPG11-217ENST00000559511 Q8IZM0 81 aa7.57□□□□□ -1.2
SPG11-217ENST00000559511 COL6A5A8TX70 2615 aa7.56□□□□□ -1.2
SPG11-217ENST00000559511 H3BT86 120 aa7.56□□□□□ -1.2
SPG11-217ENST00000559511 MRPL23Q16540 153 aaKnown RBP7.56□□□□□ -1.2
SPG11-217ENST00000559511 CD164L2Q6UWJ8 174 aa7.56□□□□□ -1.2
SPG11-217ENST00000559511 CHCHD10Q8WYQ3 142 aaPredicted RBP7.56□□□□□ -1.2
SPG11-217ENST00000559511 RETNQ9HD89 108 aa7.56□□□□□ -1.2
SPG11-217ENST00000559511 TRAV13-2A0A0B4J235 113 aa7.55□□□□□ -1.2
SPG11-217ENST00000559511 CRPP02741 224 aa7.55□□□□□ -1.2
SPG11-217ENST00000559511 LINC01561Q8N1V8 128 aa7.55□□□□□ -1.2
SPG11-217ENST00000559511 KIAA0087Q14695 138 aa7.54□□□□□ -1.2
SPG11-217ENST00000559511 LELP1Q5T871 98 aa7.54□□□□□ -1.2
SPG11-217ENST00000559511 UBE2WQ96B02 151 aa7.54□□□□□ -1.2
SPG11-217ENST00000559511 FAM218AQ96MZ4 157 aa7.54□□□□□ -1.2
SPG11-217ENST00000559511 RPL28P46779 137 aaKnown RBP7.53□□□□□ -1.2
SPG11-217ENST00000559511 XGP55808 180 aa7.53□□□□□ -1.2
SPG11-217ENST00000559511 TENM3Q9P273 2699 aa7.53□□□□□ -1.2
SPG11-217ENST00000559511 MT-ATP8P03928 68 aa7.52□□□□□ -1.2
SPG11-217ENST00000559511 CKS1BP61024 79 aa7.52□□□□□ -1.2
SPG11-217ENST00000559511 SMIM11BQ8TCY0 68 aa7.52□□□□□ -1.21
SPG11-217ENST00000559511 TRAV8-4A0A0B4J246 113 aa7.51□□□□□ -1.21
SPG11-217ENST00000559511 MALP21145 153 aa7.51□□□□□ -1.21
SPG11-217ENST00000559511 SCGB1A1P11684 91 aa7.51□□□□□ -1.21
SPG11-217ENST00000559511 LYPD5Q6UWN5 251 aa7.51□□□□□ -1.21
SPG11-217ENST00000559511 TRACP01848 142 aa7.5□□□□□ -1.21
SPG11-217ENST00000559511 KLK12Q9UKR0 248 aa7.5□□□□□ -1.21
SPG11-217ENST00000559511 NOTCH1P46531 2555 aa7.5□□□□□ -1.21
SPG11-217ENST00000559511 C9orf116Q5BN46 136 aaPredicted RBP7.49□□□□□ -1.21
SPG11-217ENST00000559511 PRR34Q9NV39 138 aa7.49□□□□□ -1.21
SPG11-217ENST00000559511 CXCL5P42830 114 aa7.49□□□□□ -1.21
SPG11-217ENST00000559511 ENHOQ6UWT2 76 aa7.49□□□□□ -1.21
SPG11-217ENST00000559511 DEFB121Q5J5C9 76 aa7.48□□□□□ -1.21
SPG11-217ENST00000559511 Q6ZTC4 211 aa7.48□□□□□ -1.21
SPG11-217ENST00000559511 COX17Q14061 63 aa7.48□□□□□ -1.21
SPG11-217ENST00000559511 KPRPQ5T749 579 aaPredicted RBP7.48□□□□□ -1.21
SPG11-217ENST00000559511 C6orf223Q8N319 242 aa7.48□□□□□ -1.21
SPG11-217ENST00000559511 OR13C6PQ8NH95 151 aa7.48□□□□□ -1.21
SPG11-217ENST00000559511 LINC00526Q96FQ7 95 aa7.48□□□□□ -1.21
SPG11-217ENST00000559511 Q9HAA7 133 aa7.48□□□□□ -1.21
SPG11-217ENST00000559511 C22orf24Q9Y442 160 aa7.48□□□□□ -1.21
SPG11-217ENST00000559511 A0A087WYN8 130 aa7.47□□□□□ -1.21
SPG11-217ENST00000559511 PRB2P02812 416 aaPredicted RBP7.47□□□□□ -1.21
SPG11-217ENST00000559511 PRR3P79522 188 aaKnown RBP7.47□□□□□ -1.21
SPG11-217ENST00000559511 C10orf25Q5T742 122 aa7.47□□□□□ -1.21
SPG11-217ENST00000559511 A0A0J9YWU9 116 aa7.46□□□□□ -1.21
SPG11-217ENST00000559511 BAALC-AS2P0C853 105 aa7.46□□□□□ -1.21
SPG11-217ENST00000559511 WFDC10BQ8IUB3 73 aa7.46□□□□□ -1.21
SPG11-217ENST00000559511 KLK5Q9Y337 293 aaPredicted RBP7.46□□□□□ -1.21
SPG11-217ENST00000559511 SPAG11BQ08648 103 aa7.46□□□□□ -1.22
SPG11-217ENST00000559511 NBEAL1Q6ZS30 2694 aa7.46□□□□□ -1.22
SPG11-217ENST00000559511 H3BNG1 76 aa7.45□□□□□ -1.22
SPG11-217ENST00000559511 UNQ6190/PRO20217Q6UXQ8 127 aa7.45□□□□□ -1.22
SPG11-217ENST00000559511 NANOS2P60321 138 aaKnown RBP7.45□□□□□ -1.22
SPG11-217ENST00000559511 Q8NDZ9 215 aa7.45□□□□□ -1.22
SPG11-217ENST00000559511 H0YGX0 51 aa7.44□□□□□ -1.22
SPG11-217ENST00000559511 K7EIL1 84 aa7.43□□□□□ -1.22
SPG11-217ENST00000559511 NDUFC2O95298 119 aa7.43□□□□□ -1.22
SPG11-217ENST00000559511 FAM240AA0A1B0GVK7 77 aa7.42□□□□□ -1.22
SPG11-217ENST00000559511 LECT2O14960 151 aa7.42□□□□□ -1.22
SPG11-217ENST00000559511 NCR3O14931 201 aa7.42□□□□□ -1.22
SPG11-217ENST00000559511 DNAL4O96015 105 aa7.42□□□□□ -1.22
SPG11-217ENST00000559511 ESRGQ1W209 222 aa7.42□□□□□ -1.22
SPG11-217ENST00000559511 C11orf45Q8TAV5 145 aa7.42□□□□□ -1.22
SPG11-217ENST00000559511 C15orf53Q8NAA6 179 aa7.41□□□□□ -1.22
SPG11-217ENST00000559511 MDFIQ99750 246 aa7.41□□□□□ -1.22
SPG11-217ENST00000559511 C9orf129Q5T035 196 aaKnown RBP7.4□□□□□ -1.22
SPG11-217ENST00000559511 TM2D3Q9BRN9 247 aa7.4□□□□□ -1.22
SPG11-217ENST00000559511 HUWE1Q7Z6Z7 4374 aaKnown RBP7.4□□□□□ -1.22
SPG11-217ENST00000559511 DEFB131BA0A096LNP1 70 aa7.4□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms