RNA–Protein interactions for RNA: ENST00000559460.5

SMAD3-211, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 568 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-211ENST00000559460 NKAPP1Q8N9T2 125 aa5.35□□□□□ -1.55
SMAD3-211ENST00000559460 TIMM21Q9BVV7 248 aa5.35□□□□□ -1.55
SMAD3-211ENST00000559460 PPP1R2P9O14990 202 aa5.34□□□□□ -1.55
SMAD3-211ENST00000559460 APOC3P02656 99 aa5.34□□□□□ -1.55
SMAD3-211ENST00000559460 CFC1P0CG37 223 aa5.34□□□□□ -1.55
SMAD3-211ENST00000559460 POLR2KP53803 58 aaKnown RBP5.34□□□□□ -1.55
SMAD3-211ENST00000559460 RPL32P62910 135 aaKnown RBP5.34□□□□□ -1.55
SMAD3-211ENST00000559460 PRLHP81277 87 aa5.34□□□□□ -1.55
SMAD3-211ENST00000559460 KIAA0087Q14695 138 aa5.34□□□□□ -1.55
SMAD3-211ENST00000559460 FAM19A1Q7Z5A9 133 aa5.34□□□□□ -1.55
SMAD3-211ENST00000559460 Q8NBF4 154 aa5.34□□□□□ -1.55
SMAD3-211ENST00000559460 BORCS7Q96B45 105 aa5.34□□□□□ -1.55
SMAD3-211ENST00000559460 ANAPC16Q96DE5 110 aa5.34□□□□□ -1.55
SMAD3-211ENST00000559460 GATCO43716 136 aaKnown RBP5.33□□□□□ -1.56
SMAD3-211ENST00000559460 MT-ND4LP03901 98 aa5.33□□□□□ -1.56
SMAD3-211ENST00000559460 ADCYAP1P18509 176 aa5.33□□□□□ -1.56
SMAD3-211ENST00000559460 TOMM7Q9P0U1 55 aa5.33□□□□□ -1.56
SMAD3-211ENST00000559460 RPL23P62829 140 aaKnown RBP5.32□□□□□ -1.56
SMAD3-211ENST00000559460 C6orf226Q5I0X4 101 aa5.32□□□□□ -1.56
SMAD3-211ENST00000559460 FAM231DQ6ZW35 169 aa5.32□□□□□ -1.56
SMAD3-211ENST00000559460 LINC01551Q86U37 167 aa5.32□□□□□ -1.56
SMAD3-211ENST00000559460 OSTCQ9NRP0 149 aa5.32□□□□□ -1.56
SMAD3-211ENST00000559460 IGKV2-28A0A075B6P5 120 aa5.31□□□□□ -1.56
SMAD3-211ENST00000559460 PPP1R17O96001 155 aa5.31□□□□□ -1.56
SMAD3-211ENST00000559460 IGKV2D-28P01615 120 aa5.31□□□□□ -1.56
SMAD3-211ENST00000559460 CBLN2Q8IUK8 224 aa5.31□□□□□ -1.56
SMAD3-211ENST00000559460 GNB1LQ9BYB4 327 aa5.31□□□□□ -1.56
SMAD3-211ENST00000559460 TRAV9-1A0A075B6T8 112 aa5.3□□□□□ -1.56
SMAD3-211ENST00000559460 SLC25A20O43772 301 aa5.3□□□□□ -1.56
SMAD3-211ENST00000559460 ADIRFQ15847 76 aa5.3□□□□□ -1.56
SMAD3-211ENST00000559460 CT83Q5H943 113 aa5.3□□□□□ -1.56
SMAD3-211ENST00000559460 PLEKHB2Q96CS7 222 aa5.3□□□□□ -1.56
SMAD3-211ENST00000559460 SPANXA1Q9NS26 97 aa5.3□□□□□ -1.56
SMAD3-211ENST00000559460 ZNF706Q9Y5V0 76 aaPredicted RBP5.3□□□□□ -1.56
SMAD3-211ENST00000559460 TCAPO15273 167 aa5.29□□□□□ -1.56
SMAD3-211ENST00000559460 SUMO2P61956 95 aaKnown RBP5.29□□□□□ -1.56
SMAD3-211ENST00000559460 KRTAP19-1Q8IUB9 90 aa5.29□□□□□ -1.56
SMAD3-211ENST00000559460 HIGD2AQ9BW72 106 aa5.29□□□□□ -1.56
SMAD3-211ENST00000559460 RPS10P5Q9NQ39 176 aa5.29□□□□□ -1.56
SMAD3-211ENST00000559460 SMCO4Q9NRQ5 59 aa5.29□□□□□ -1.56
SMAD3-211ENST00000559460 LINC00846Q9NV44 126 aa5.29□□□□□ -1.56
SMAD3-211ENST00000559460 FCGBPQ9Y6R7 5405 aaPredicted RBP5.28□□□□□ -1.56
SMAD3-211ENST00000559460 A8MWL6 223 aa5.28□□□□□ -1.56
SMAD3-211ENST00000559460 KRTAP4-16G5E9R7 235 aaPredicted RBP5.28□□□□□ -1.56
SMAD3-211ENST00000559460 S100PP25815 95 aa5.28□□□□□ -1.56
SMAD3-211ENST00000559460 MRPS36P82909 103 aaKnown RBP5.28□□□□□ -1.56
SMAD3-211ENST00000559460 Q6ZN92 141 aa5.28□□□□□ -1.56
SMAD3-211ENST00000559460 ALKBH7Q9BT30 221 aaPredicted RBP5.28□□□□□ -1.56
SMAD3-211ENST00000559460 SSPOA2VEC9 5147 aa5.27□□□□□ -1.57
SMAD3-211ENST00000559460 USH2AO75445 5202 aa5.27□□□□□ -1.57
SMAD3-211ENST00000559460 F8VRH5 84 aa5.27□□□□□ -1.57
SMAD3-211ENST00000559460 RPS29P62273 56 aaKnown RBP5.27□□□□□ -1.57
SMAD3-211ENST00000559460 RPL39P62891 51 aaKnown RBP5.27□□□□□ -1.57
SMAD3-211ENST00000559460 COX19Q49B96 90 aa5.27□□□□□ -1.57
SMAD3-211ENST00000559460 LINC01561Q8N1V8 128 aa5.27□□□□□ -1.57
SMAD3-211ENST00000559460 Q8N377 158 aa5.27□□□□□ -1.57
SMAD3-211ENST00000559460 SMIM27A0A1W2PRY6 76 aa5.26□□□□□ -1.57
SMAD3-211ENST00000559460 RAB4AP20338 218 aa5.26□□□□□ -1.57
SMAD3-211ENST00000559460 IFI27P40305 119 aaPredicted RBP5.26□□□□□ -1.57
SMAD3-211ENST00000559460 Q8IZM0 81 aa5.26□□□□□ -1.57
SMAD3-211ENST00000559460 SPRR4Q96PI1 79 aa5.26□□□□□ -1.57
SMAD3-211ENST00000559460 TMEM126AQ9H061 195 aa5.26□□□□□ -1.57
SMAD3-211ENST00000559460 TMEM191AQ9H0A3 160 aa5.26□□□□□ -1.57
SMAD3-211ENST00000559460 V9GYV3 84 aa5.26□□□□□ -1.57
SMAD3-211ENST00000559460 IGLV5-37A0A075B6J1 123 aa5.25□□□□□ -1.57
SMAD3-211ENST00000559460 TRBV24-1A0A075B6N3 115 aa5.25□□□□□ -1.57
SMAD3-211ENST00000559460 A0A1B0GW15 77 aa5.25□□□□□ -1.57
SMAD3-211ENST00000559460 HIGD1CA8MV81 97 aa5.25□□□□□ -1.57
SMAD3-211ENST00000559460 SMKR1H3BMG3 65 aa5.25□□□□□ -1.57
SMAD3-211ENST00000559460 AMN1Q8IY45 258 aa5.25□□□□□ -1.57
SMAD3-211ENST00000559460 C2orf88Q9BSF0 95 aa5.25□□□□□ -1.57
SMAD3-211ENST00000559460 NAT8BQ9UHF3 227 aa5.25□□□□□ -1.57
SMAD3-211ENST00000559460 S100A8P05109 93 aa5.24□□□□□ -1.57
SMAD3-211ENST00000559460 CXCL5P42830 114 aa5.24□□□□□ -1.57
SMAD3-211ENST00000559460 ATP5L2Q7Z4Y8 100 aa5.24□□□□□ -1.57
SMAD3-211ENST00000559460 GEMIN7Q9H840 131 aaKnown RBP5.24□□□□□ -1.57
SMAD3-211ENST00000559460 A0A1B0GUT8 65 aa5.23□□□□□ -1.57
SMAD3-211ENST00000559460 TMEM238C9JI98 176 aa5.23□□□□□ -1.57
SMAD3-211ENST00000559460 TEX43Q6ZNM6 134 aa5.23□□□□□ -1.57
SMAD3-211ENST00000559460 YPEL4Q96NS1 127 aa5.23□□□□□ -1.57
SMAD3-211ENST00000559460 SYNE2Q8WXH0 6885 aaKnown RBP5.23□□□□□ -1.57
SMAD3-211ENST00000559460 C9orf92A6NGG3 77 aa5.22□□□□□ -1.57
SMAD3-211ENST00000559460 COLCA2A8K830 154 aa5.22□□□□□ -1.57
SMAD3-211ENST00000559460 RIGQ13278 110 aa5.22□□□□□ -1.57
SMAD3-211ENST00000559460 MRPL54Q6P161 138 aaKnown RBP5.22□□□□□ -1.57
SMAD3-211ENST00000559460 Q6Q795 121 aa5.22□□□□□ -1.57
SMAD3-211ENST00000559460 TMEM141Q96I45 108 aa5.22□□□□□ -1.57
SMAD3-211ENST00000559460 SCO1O75880 301 aa5.21□□□□□ -1.58
SMAD3-211ENST00000559460 MOBPQ13875 183 aa5.21□□□□□ -1.58
SMAD3-211ENST00000559460 NRACQ8N912 160 aa5.21□□□□□ -1.58
SMAD3-211ENST00000559460 C20orf78Q9BR46 151 aa5.21□□□□□ -1.58
SMAD3-211ENST00000559460 MACF1Q9UPN3 7388 aaKnown RBP5.21□□□□□ -1.58
SMAD3-211ENST00000559460 IGLV9-49A0A0B4J1Y8 123 aa5.2□□□□□ -1.58
SMAD3-211ENST00000559460 M0R378 163 aa5.2□□□□□ -1.58
SMAD3-211ENST00000559460 FAM104AQ969W3 186 aa5.2□□□□□ -1.58
SMAD3-211ENST00000559460 IGLV4-3A0A075B6K6 122 aa5.19□□□□□ -1.58
SMAD3-211ENST00000559460 RAB5AP20339 215 aa5.19□□□□□ -1.58
SMAD3-211ENST00000559460 RAB5BP61020 215 aa5.19□□□□□ -1.58
SMAD3-211ENST00000559460 A0A1B0GXF2 115 aa5.18□□□□□ -1.58
SMAD3-211ENST00000559460 RPL24P83731 157 aaKnown RBP5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms