RNA–Protein interactions for RNA: ENST00000559100.1

GABPB1-209, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 290 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-209ENST00000559100 PAPPAQ13219 1627 aa0.34□□□□□ -2.36
GABPB1-209ENST00000559100 NHSL1Q5SYE7 1610 aa0.34□□□□□ -2.36
GABPB1-209ENST00000559100 IGF2RP11717 2491 aa0.33□□□□□ -2.36
GABPB1-209ENST00000559100 ABCC2Q92887 1545 aa0.33□□□□□ -2.36
GABPB1-209ENST00000559100 COX6B1P14854 86 aa0.33□□□□□ -2.36
GABPB1-209ENST00000559100 PEA15Q15121 130 aa0.33□□□□□ -2.36
GABPB1-209ENST00000559100 KRTAP21-1Q3LI58 79 aa0.33□□□□□ -2.36
GABPB1-209ENST00000559100 MYO7BQ6PIF6 2116 aa0.33□□□□□ -2.36
GABPB1-209ENST00000559100 USMG5Q96IX5 58 aa0.33□□□□□ -2.36
GABPB1-209ENST00000559100 PSENENQ9NZ42 101 aa0.33□□□□□ -2.36
GABPB1-209ENST00000559100 PTPRZ1P23471 2315 aaPredicted RBP0.33□□□□□ -2.36
GABPB1-209ENST00000559100 COL4A6Q14031 1691 aa0.33□□□□□ -2.36
GABPB1-209ENST00000559100 GOLGA4Q13439 2230 aaKnown RBP0.33□□□□□ -2.36
GABPB1-209ENST00000559100 UNC79Q9P2D8 2635 aa0.33□□□□□ -2.36
GABPB1-209ENST00000559100 NUP188Q5SRE5 1749 aa0.33□□□□□ -2.36
GABPB1-209ENST00000559100 MARF1Q9Y4F3 1742 aaKnown RBP0.33□□□□□ -2.36
GABPB1-209ENST00000559100 PLCE1Q9P212 2302 aa0.32□□□□□ -2.36
GABPB1-209ENST00000559100 COX8AP10176 69 aa0.32□□□□□ -2.36
GABPB1-209ENST00000559100 Q5VSD8 79 aa0.32□□□□□ -2.36
GABPB1-209ENST00000559100 ALKAL2Q6UX46 152 aa0.32□□□□□ -2.36
GABPB1-209ENST00000559100 NRXN1Q9ULB1 1477 aa0.32□□□□□ -2.36
GABPB1-209ENST00000559100 KNDC1Q76NI1 1749 aa0.32□□□□□ -2.36
GABPB1-209ENST00000559100 EDC4Q6P2E9 1401 aaKnown RBP0.31□□□□□ -2.36
GABPB1-209ENST00000559100 PIEZO2Q9H5I5 2752 aa0.31□□□□□ -2.36
GABPB1-209ENST00000559100 CLTCQ00610 1675 aaKnown RBP0.31□□□□□ -2.36
GABPB1-209ENST00000559100 C2CD3Q4AC94 2353 aa0.31□□□□□ -2.36
GABPB1-209ENST00000559100 XRN1Q8IZH2 1706 aaKnown RBP0.31□□□□□ -2.36
GABPB1-209ENST00000559100 SPRR1AP35321 89 aa0.31□□□□□ -2.36
GABPB1-209ENST00000559100 GNG2P59768 71 aa0.31□□□□□ -2.36
GABPB1-209ENST00000559100 DEFB123Q8N688 67 aa0.31□□□□□ -2.36
GABPB1-209ENST00000559100 C20orf78Q9BR46 151 aa0.31□□□□□ -2.36
GABPB1-209ENST00000559100 CRIPTQ9P021 101 aa0.31□□□□□ -2.36
GABPB1-209ENST00000559100 HIGD1BQ9P298 99 aa0.31□□□□□ -2.36
GABPB1-209ENST00000559100 CSMD3Q7Z407 3707 aa0.3□□□□□ -2.36
GABPB1-209ENST00000559100 ANKRD26Q9UPS8 1709 aa0.3□□□□□ -2.36
GABPB1-209ENST00000559100 ATP10BO94823 1461 aa0.3□□□□□ -2.36
GABPB1-209ENST00000559100 CCDC141Q6ZP82 1450 aa0.3□□□□□ -2.36
GABPB1-209ENST00000559100 CYB5AP00167 134 aa0.3□□□□□ -2.36
GABPB1-209ENST00000559100 SPRR1BP22528 89 aa0.3□□□□□ -2.36
GABPB1-209ENST00000559100 PYY3Q5JQD4 70 aa0.3□□□□□ -2.36
GABPB1-209ENST00000559100 S100A16Q96FQ6 103 aaKnown RBP0.3□□□□□ -2.36
GABPB1-209ENST00000559100 SMARCA2P51531 1590 aa0.3□□□□□ -2.36
GABPB1-209ENST00000559100 A0A0G2JMZ2 1700 aa0.3□□□□□ -2.36
GABPB1-209ENST00000559100 TULP4Q9NRJ4 1543 aa0.29□□□□□ -2.36
GABPB1-209ENST00000559100 MAST4O15021 2626 aa0.29□□□□□ -2.36
GABPB1-209ENST00000559100 I3L3M4 83 aa0.29□□□□□ -2.36
GABPB1-209ENST00000559100 K7EQZ3 153 aa0.29□□□□□ -2.36
GABPB1-209ENST00000559100 ANKRD17O75179 2603 aaKnown RBP0.29□□□□□ -2.36
GABPB1-209ENST00000559100 USF3Q68DE3 2245 aa0.29□□□□□ -2.36
GABPB1-209ENST00000559100 TROQ12816 1431 aaPredicted RBP0.29□□□□□ -2.36
GABPB1-209ENST00000559100 EPRSP07814 1512 aaKnown RBP0.28□□□□□ -2.36
GABPB1-209ENST00000559100 PPRC1Q5VV67 1664 aaKnown RBP0.28□□□□□ -2.36
GABPB1-209ENST00000559100 PVALEFA0A1B0GWK0 134 aa0.28□□□□□ -2.36
GABPB1-209ENST00000559100 CPSF4LA6NMK7 179 aaKnown RBP0.28□□□□□ -2.36
GABPB1-209ENST00000559100 K7EP34 96 aa0.28□□□□□ -2.36
GABPB1-209ENST00000559100 SPINK4O60575 86 aa0.28□□□□□ -2.36
GABPB1-209ENST00000559100 HMGN2P05204 90 aaKnown RBP0.28□□□□□ -2.36
GABPB1-209ENST00000559100 IGLC2P0DOY2 106 aa0.28□□□□□ -2.36
GABPB1-209ENST00000559100 IGLC3P0DOY3 106 aa0.28□□□□□ -2.36
GABPB1-209ENST00000559100 AKAP6Q13023 2319 aa0.28□□□□□ -2.36
GABPB1-209ENST00000559100 TTC37Q6PGP7 1564 aa0.28□□□□□ -2.37
GABPB1-209ENST00000559100 PTPRQQ9UMZ3 2332 aa0.27□□□□□ -2.37
GABPB1-209ENST00000559100 FAT4Q6V0I7 4981 aa0.27□□□□□ -2.37
GABPB1-209ENST00000559100 SPTY2D1-AS1A0A0U1RR47 76 aa0.27□□□□□ -2.37
GABPB1-209ENST00000559100 PLGLAQ15195 96 aa0.27□□□□□ -2.37
GABPB1-209ENST00000559100 DEFB112Q30KQ8 113 aa0.27□□□□□ -2.37
GABPB1-209ENST00000559100 DEFB105AQ8NG35 78 aa0.27□□□□□ -2.37
GABPB1-209ENST00000559100 APLNQ9ULZ1 77 aa0.27□□□□□ -2.37
GABPB1-209ENST00000559100 DNAJC13O75165 2243 aa0.27□□□□□ -2.37
GABPB1-209ENST00000559100 PKDREJQ9NTG1 2253 aa0.27□□□□□ -2.37
GABPB1-209ENST00000559100 DOPEY2Q9Y3R5 2298 aa0.27□□□□□ -2.37
GABPB1-209ENST00000559100 FANCAO15360 1455 aa0.27□□□□□ -2.37
GABPB1-209ENST00000559100 IQSEC2Q5JU85 1478 aa0.27□□□□□ -2.37
GABPB1-209ENST00000559100 IGSF10Q6WRI0 2623 aa0.27□□□□□ -2.37
GABPB1-209ENST00000559100 MON2Q7Z3U7 1717 aa0.27□□□□□ -2.37
GABPB1-209ENST00000559100 LOC730098B7Z3J9 87 aa0.26□□□□□ -2.37
GABPB1-209ENST00000559100 NMSQ5H8A3 153 aa0.26□□□□□ -2.37
GABPB1-209ENST00000559100 C9orf62Q8N4C0 152 aa0.26□□□□□ -2.37
GABPB1-209ENST00000559100 PLIN4Q96Q06 1357 aa0.26□□□□□ -2.37
GABPB1-209ENST00000559100 TARBP1Q13395 1621 aaKnown RBP0.26□□□□□ -2.37
GABPB1-209ENST00000559100 NCOR2Q9Y618 2525 aa0.26□□□□□ -2.37
GABPB1-209ENST00000559100 TSC2P49815 1807 aa0.25□□□□□ -2.37
GABPB1-209ENST00000559100 C5P01031 1676 aa0.25□□□□□ -2.37
GABPB1-209ENST00000559100 SHPRHQ149N8 1683 aa0.25□□□□□ -2.37
GABPB1-209ENST00000559100 KIAA0556O60303 1618 aa0.25□□□□□ -2.37
GABPB1-209ENST00000559100 CUX1P39880 1505 aa0.25□□□□□ -2.37
GABPB1-209ENST00000559100 A0A1B0GUT8 65 aa0.25□□□□□ -2.37
GABPB1-209ENST00000559100 IQCF6A8MYZ5 107 aa0.25□□□□□ -2.37
GABPB1-209ENST00000559100 SNRPFP62306 86 aaKnown RBP0.25□□□□□ -2.37
GABPB1-209ENST00000559100 KLK9Q2XQG4 91 aa0.25□□□□□ -2.37
GABPB1-209ENST00000559100 UBR5O95071 2799 aaPredicted RBP0.25□□□□□ -2.37
GABPB1-209ENST00000559100 SPTBN1Q01082 2364 aaKnown RBP0.25□□□□□ -2.37
GABPB1-209ENST00000559100 PAPPA2Q9BXP8 1791 aa0.24□□□□□ -2.37
GABPB1-209ENST00000559100 CEP162Q5TB80 1403 aa0.24□□□□□ -2.37
GABPB1-209ENST00000559100 HEPN1Q6WQI6 88 aa0.24□□□□□ -2.37
GABPB1-209ENST00000559100 RABAC1Q9UI14 185 aa0.24□□□□□ -2.37
GABPB1-209ENST00000559100 UBE2D4Q9Y2X8 147 aa0.24□□□□□ -2.37
GABPB1-209ENST00000559100 SAMD9Q5K651 1589 aa0.23□□□□□ -2.37
GABPB1-209ENST00000559100 MYH4Q9Y623 1939 aa0.23□□□□□ -2.37
GABPB1-209ENST00000559100 MYMXA0A1B0GTQ4 84 aa0.23□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 251.9 ms