RNA–Protein interactions for RNA: ENST00000559080.1

CHRNA3-205, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 4

Gene CHRNA3, Length 535 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-205ENST00000559080 PHF5AQ7RTV0 110 aaKnown RBP6.91□□□□□ -1.3
CHRNA3-205ENST00000559080 ERASQ7Z444 233 aa6.91□□□□□ -1.3
CHRNA3-205ENST00000559080 FAM19A3Q7Z5A8 133 aa6.91□□□□□ -1.3
CHRNA3-205ENST00000559080 ALKBH7Q9BT30 221 aaPredicted RBP6.91□□□□□ -1.3
CHRNA3-205ENST00000559080 MRPL18Q9H0U6 180 aaKnown RBP6.91□□□□□ -1.3
CHRNA3-205ENST00000559080 SMCO4Q9NRQ5 59 aa6.91□□□□□ -1.3
CHRNA3-205ENST00000559080 CARHSP1Q9Y2V2 147 aaKnown RBP6.91□□□□□ -1.3
CHRNA3-205ENST00000559080 NDUFC2-KCTD14E9PQ53 114 aa6.9□□□□□ -1.3
CHRNA3-205ENST00000559080 FABP9Q0Z7S8 132 aa6.9□□□□□ -1.3
CHRNA3-205ENST00000559080 C10orf91Q5T1B1 145 aa6.9□□□□□ -1.3
CHRNA3-205ENST00000559080 FAM19A5Q7Z5A7 132 aaPredicted RBP6.9□□□□□ -1.3
CHRNA3-205ENST00000559080 Q8IZM0 81 aa6.9□□□□□ -1.3
CHRNA3-205ENST00000559080 PSORS1C2Q9UIG4 136 aa6.9□□□□□ -1.3
CHRNA3-205ENST00000559080 FAM168BA1KXE4 195 aa6.89□□□□□ -1.31
CHRNA3-205ENST00000559080 C6orf226Q5I0X4 101 aa6.89□□□□□ -1.31
CHRNA3-205ENST00000559080 C1orf137Q5JT78 98 aa6.89□□□□□ -1.31
CHRNA3-205ENST00000559080 LINC00469Q8N7U9 141 aa6.89□□□□□ -1.31
CHRNA3-205ENST00000559080 CDKN2A-AS1Q9UH64 79 aa6.89□□□□□ -1.31
CHRNA3-205ENST00000559080 LINC01546A6NGU7 62 aa6.88□□□□□ -1.31
CHRNA3-205ENST00000559080 M0QXV9 152 aa6.88□□□□□ -1.31
CHRNA3-205ENST00000559080 NDUFA5Q16718 116 aa6.88□□□□□ -1.31
CHRNA3-205ENST00000559080 CXCL5P42830 114 aa6.87□□□□□ -1.31
CHRNA3-205ENST00000559080 KRTAP9-6A0A140TA67 174 aa6.86□□□□□ -1.31
CHRNA3-205ENST00000559080 TINCRA0A1B0GVN0 87 aa6.86□□□□□ -1.31
CHRNA3-205ENST00000559080 F8VRH5 84 aa6.86□□□□□ -1.31
CHRNA3-205ENST00000559080 APOC3P02656 99 aa6.86□□□□□ -1.31
CHRNA3-205ENST00000559080 UBE2BP63146 152 aa6.86□□□□□ -1.31
CHRNA3-205ENST00000559080 MUC2Q02817 5179 aa6.85□□□□□ -1.31
CHRNA3-205ENST00000559080 SMIM1B2RUZ4 78 aa6.85□□□□□ -1.31
CHRNA3-205ENST00000559080 SNAPINO95295 136 aa6.85□□□□□ -1.31
CHRNA3-205ENST00000559080 PMVKQ15126 192 aa6.85□□□□□ -1.31
CHRNA3-205ENST00000559080 C9orf129Q5T035 196 aaKnown RBP6.85□□□□□ -1.31
CHRNA3-205ENST00000559080 SVBPQ8N300 66 aa6.85□□□□□ -1.31
CHRNA3-205ENST00000559080 CST9LQ9H4G1 147 aa6.85□□□□□ -1.31
CHRNA3-205ENST00000559080 TRAPPC1Q9Y5R8 145 aa6.85□□□□□ -1.31
CHRNA3-205ENST00000559080 PDZD11Q5EBL8 140 aa6.84□□□□□ -1.31
CHRNA3-205ENST00000559080 COX7B2Q8TF08 81 aa6.84□□□□□ -1.31
CHRNA3-205ENST00000559080 IGLV5-45A0A087WSX0 123 aa6.83□□□□□ -1.32
CHRNA3-205ENST00000559080 H3BRM9 83 aa6.83□□□□□ -1.32
CHRNA3-205ENST00000559080 IGLV7-43P04211 117 aa6.83□□□□□ -1.32
CHRNA3-205ENST00000559080 C18orf32Q8TCD1 76 aa6.83□□□□□ -1.32
CHRNA3-205ENST00000559080 DIRC1Q969H9 104 aa6.83□□□□□ -1.32
CHRNA3-205ENST00000559080 HBDP02042 147 aa6.82□□□□□ -1.32
CHRNA3-205ENST00000559080 SPINK8P0C7L1 97 aa6.82□□□□□ -1.32
CHRNA3-205ENST00000559080 NDUFA6P56556 154 aa6.82□□□□□ -1.32
CHRNA3-205ENST00000559080 LCE2AQ5TA79 106 aaPredicted RBP6.82□□□□□ -1.32
CHRNA3-205ENST00000559080 KRTAP7-1Q8IUC3 87 aa6.82□□□□□ -1.32
CHRNA3-205ENST00000559080 XAGE1AQ9HD64 81 aa6.82□□□□□ -1.32
CHRNA3-205ENST00000559080 LINC00614P0C842 121 aa6.81□□□□□ -1.32
CHRNA3-205ENST00000559080 RAB5BP61020 215 aa6.81□□□□□ -1.32
CHRNA3-205ENST00000559080 KRTAP11-1Q8IUC1 163 aa6.81□□□□□ -1.32
CHRNA3-205ENST00000559080 A0A096LNJ9 63 aa6.8□□□□□ -1.32
CHRNA3-205ENST00000559080 H0Y9J4 135 aa6.8□□□□□ -1.32
CHRNA3-205ENST00000559080 LBHQ53QV2 105 aaPredicted RBP6.8□□□□□ -1.32
CHRNA3-205ENST00000559080 ATP5LO75964 103 aa6.79□□□□□ -1.32
CHRNA3-205ENST00000559080 IGLC3P0DOY3 106 aa6.79□□□□□ -1.32
CHRNA3-205ENST00000559080 PMCHL1Q16048 86 aa6.79□□□□□ -1.32
CHRNA3-205ENST00000559080 URB1-AS1Q96HZ7 61 aa6.79□□□□□ -1.32
CHRNA3-205ENST00000559080 C22orf24Q9Y442 160 aa6.79□□□□□ -1.32
CHRNA3-205ENST00000559080 TP73-AS1Q9UF72 201 aa6.78□□□□□ -1.32
CHRNA3-205ENST00000559080 NUPR1O60356 82 aa6.77□□□□□ -1.33
CHRNA3-205ENST00000559080 ZNF22P17026 224 aaPredicted RBP6.77□□□□□ -1.33
CHRNA3-205ENST00000559080 MRPL55Q7Z7F7 128 aaKnown RBP6.77□□□□□ -1.33
CHRNA3-205ENST00000559080 IGLV5-39A0A0G2JS06 123 aa6.76□□□□□ -1.33
CHRNA3-205ENST00000559080 BAGE3Q86Y29 109 aa6.76□□□□□ -1.33
CHRNA3-205ENST00000559080 A0A0U1RQV1 116 aa6.75□□□□□ -1.33
CHRNA3-205ENST00000559080 TMEM170BQ5T4T1 132 aa6.75□□□□□ -1.33
CHRNA3-205ENST00000559080 PRR26Q8N8Z3 221 aa6.75□□□□□ -1.33
CHRNA3-205ENST00000559080 NKAPP1Q8N9T2 125 aa6.75□□□□□ -1.33
CHRNA3-205ENST00000559080 CHCHD1Q96BP2 118 aaKnown RBP6.75□□□□□ -1.33
CHRNA3-205ENST00000559080 IGLV1-50A0A075B6I6 118 aa6.74□□□□□ -1.33
CHRNA3-205ENST00000559080 C11orf86A6NJI1 115 aa6.74□□□□□ -1.33
CHRNA3-205ENST00000559080 PFN2P35080 140 aa6.74□□□□□ -1.33
CHRNA3-205ENST00000559080 SFTA2Q6UW10 78 aa6.74□□□□□ -1.33
CHRNA3-205ENST00000559080 YPEL4Q96NS1 127 aa6.74□□□□□ -1.33
CHRNA3-205ENST00000559080 ZNF861PO60384 105 aa6.73□□□□□ -1.33
CHRNA3-205ENST00000559080 CBLN2Q8IUK8 224 aa6.73□□□□□ -1.33
CHRNA3-205ENST00000559080 CHTOPQ9Y3Y2 248 aaKnown RBP6.73□□□□□ -1.33
CHRNA3-205ENST00000559080 FAT4Q6V0I7 4981 aa6.72□□□□□ -1.33
CHRNA3-205ENST00000559080 IGLV5-37A0A075B6J1 123 aa6.72□□□□□ -1.33
CHRNA3-205ENST00000559080 GAGE10A6NGK3 116 aa6.72□□□□□ -1.33
CHRNA3-205ENST00000559080 RPL37AP8A6NKH3 93 aa6.72□□□□□ -1.33
CHRNA3-205ENST00000559080 BCE1O60756 84 aa6.72□□□□□ -1.33
CHRNA3-205ENST00000559080 HSBP1O75506 76 aa6.72□□□□□ -1.33
CHRNA3-205ENST00000559080 RPL13AP40429 203 aaKnown RBP6.72□□□□□ -1.33
CHRNA3-205ENST00000559080 RPL28P46779 137 aaKnown RBP6.72□□□□□ -1.33
CHRNA3-205ENST00000559080 IFI27L1Q96BM0 104 aa6.72□□□□□ -1.33
CHRNA3-205ENST00000559080 LINC00167Q96N53 147 aa6.72□□□□□ -1.33
CHRNA3-205ENST00000559080 ERG28Q9UKR5 140 aa6.72□□□□□ -1.33
CHRNA3-205ENST00000559080 KRTAP1-4P0C5Y4 121 aa6.71□□□□□ -1.34
CHRNA3-205ENST00000559080 COX17Q14061 63 aa6.71□□□□□ -1.34
CHRNA3-205ENST00000559080 ZNF625Q96I27 306 aaPredicted RBP6.71□□□□□ -1.34
CHRNA3-205ENST00000559080 TRAV12-1A0A0B4J245 112 aa6.7□□□□□ -1.34
CHRNA3-205ENST00000559080 SND1-IT1Q9HBX3 110 aa6.7□□□□□ -1.34
CHRNA3-205ENST00000559080 RPL24P83731 157 aaKnown RBP6.69□□□□□ -1.34
CHRNA3-205ENST00000559080 PRR4Q16378 134 aa6.69□□□□□ -1.34
CHRNA3-205ENST00000559080 IGKV2-28A0A075B6P5 120 aa6.68□□□□□ -1.34
CHRNA3-205ENST00000559080 TMEM223A0PJW6 202 aa6.68□□□□□ -1.34
CHRNA3-205ENST00000559080 IGKV2D-28P01615 120 aa6.68□□□□□ -1.34
CHRNA3-205ENST00000559080 TRGC2P03986 189 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms