RNA–Protein interactions for RNA: ENST00000558952.1

CRNDE-205, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 4

Gene CRNDE, Length 600 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-205ENST00000558952 CDKN2A-AS1Q9UH64 79 aa13.28□□□□□ -0.28
CRNDE-205ENST00000558952 PSORS1C2Q9UIG4 136 aa13.28□□□□□ -0.28
CRNDE-205ENST00000558952 PLA2G2DQ9UNK4 145 aa13.28□□□□□ -0.28
CRNDE-205ENST00000558952 LINC01546A6NGU7 62 aa13.27□□□□□ -0.29
CRNDE-205ENST00000558952 FAM19A5Q7Z5A7 132 aaPredicted RBP13.27□□□□□ -0.29
CRNDE-205ENST00000558952 LINC01600Q96MT4 127 aa13.27□□□□□ -0.29
CRNDE-205ENST00000558952 FAM168BA1KXE4 195 aa13.26□□□□□ -0.29
CRNDE-205ENST00000558952 SRSF9Q13242 221 aaKnown RBP eCLIP13.26□□□□□ -0.29
CRNDE-205ENST00000558952 NDUFA5Q16718 116 aa13.25□□□□□ -0.29
CRNDE-205ENST00000558952 C1orf137Q5JT78 98 aa13.25□□□□□ -0.29
CRNDE-205ENST00000558952 LINC00469Q8N7U9 141 aa13.25□□□□□ -0.29
CRNDE-205ENST00000558952 TINCRA0A1B0GVN0 87 aa13.23□□□□□ -0.29
CRNDE-205ENST00000558952 APOC3P02656 99 aa13.23□□□□□ -0.29
CRNDE-205ENST00000558952 TRAPPC1Q9Y5R8 145 aa13.23□□□□□ -0.29
CRNDE-205ENST00000558952 SNAPINO95295 136 aa13.22□□□□□ -0.29
CRNDE-205ENST00000558952 F8VRH5 84 aa13.21□□□□□ -0.29
CRNDE-205ENST00000558952 M0QXV9 152 aa13.21□□□□□ -0.29
CRNDE-205ENST00000558952 CXCL5P42830 114 aa13.21□□□□□ -0.29
CRNDE-205ENST00000558952 PMVKQ15126 192 aa13.21□□□□□ -0.29
CRNDE-205ENST00000558952 CST9LQ9H4G1 147 aa13.21□□□□□ -0.29
CRNDE-205ENST00000558952 UBE2BP63146 152 aa13.2□□□□□ -0.3
CRNDE-205ENST00000558952 SVBPQ8N300 66 aa13.2□□□□□ -0.3
CRNDE-205ENST00000558952 SMIM1B2RUZ4 78 aa13.19□□□□□ -0.3
CRNDE-205ENST00000558952 PDZD11Q5EBL8 140 aa13.19□□□□□ -0.3
CRNDE-205ENST00000558952 C9orf129Q5T035 196 aaKnown RBP13.19□□□□□ -0.3
CRNDE-205ENST00000558952 HMCN2Q8NDA2 5059 aa13.17□□□□□ -0.3
CRNDE-205ENST00000558952 IGLV5-45A0A087WSX0 123 aa13.17□□□□□ -0.3
CRNDE-205ENST00000558952 COX7B2Q8TF08 81 aa13.17□□□□□ -0.3
CRNDE-205ENST00000558952 IGLV7-43P04211 117 aa13.16□□□□□ -0.3
CRNDE-205ENST00000558952 LINC00614P0C842 121 aa13.16□□□□□ -0.3
CRNDE-205ENST00000558952 KRTAP7-1Q8IUC3 87 aa13.16□□□□□ -0.3
CRNDE-205ENST00000558952 C18orf32Q8TCD1 76 aa13.16□□□□□ -0.3
CRNDE-205ENST00000558952 H3BRM9 83 aa13.15□□□□□ -0.3
CRNDE-205ENST00000558952 NDUFA6P56556 154 aa13.15□□□□□ -0.3
CRNDE-205ENST00000558952 SPINK8P0C7L1 97 aa13.14□□□□□ -0.31
CRNDE-205ENST00000558952 DIRC1Q969H9 104 aa13.14□□□□□ -0.31
CRNDE-205ENST00000558952 XAGE1AQ9HD64 81 aa13.14□□□□□ -0.31
CRNDE-205ENST00000558952 HBDP02042 147 aa13.13□□□□□ -0.31
CRNDE-205ENST00000558952 RAB5BP61020 215 aa13.13□□□□□ -0.31
CRNDE-205ENST00000558952 KRTAP11-1Q8IUC1 163 aa13.13□□□□□ -0.31
CRNDE-205ENST00000558952 A0A096LNJ9 63 aa13.11□□□□□ -0.31
CRNDE-205ENST00000558952 KRTAP10-8P60410 259 aa13.11□□□□□ -0.31
CRNDE-205ENST00000558952 URB1-AS1Q96HZ7 61 aa13.11□□□□□ -0.31
CRNDE-205ENST00000558952 TNXBP22105 4242 aa13.1□□□□□ -0.31
CRNDE-205ENST00000558952 LBHQ53QV2 105 aaPredicted RBP13.1□□□□□ -0.31
CRNDE-205ENST00000558952 IGLC3P0DOY3 106 aa13.09□□□□□ -0.31
CRNDE-205ENST00000558952 PMCHL1Q16048 86 aa13.09□□□□□ -0.31
CRNDE-205ENST00000558952 C22orf24Q9Y442 160 aa13.09□□□□□ -0.31
CRNDE-205ENST00000558952 ATP5LO75964 103 aa13.08□□□□□ -0.32
CRNDE-205ENST00000558952 H0Y9J4 135 aa13.07□□□□□ -0.32
CRNDE-205ENST00000558952 NUPR1O60356 82 aa13.04□□□□□ -0.32
CRNDE-205ENST00000558952 ZNF22P17026 224 aaPredicted RBP13.04□□□□□ -0.32
CRNDE-205ENST00000558952 MRPL55Q7Z7F7 128 aaKnown RBP13.04□□□□□ -0.32
CRNDE-205ENST00000558952 BAGE3Q86Y29 109 aa13.04□□□□□ -0.32
CRNDE-205ENST00000558952 TP73-AS1Q9UF72 201 aa13.04□□□□□ -0.32
CRNDE-205ENST00000558952 ODF1Q14990 250 aa13.03□□□□□ -0.32
CRNDE-205ENST00000558952 IGLV5-39A0A0G2JS06 123 aa13.02□□□□□ -0.33
CRNDE-205ENST00000558952 YPEL4Q96NS1 127 aa13.02□□□□□ -0.33
CRNDE-205ENST00000558952 TMEM170BQ5T4T1 132 aa13.01□□□□□ -0.33
CRNDE-205ENST00000558952 CHCHD1Q96BP2 118 aaKnown RBP13.01□□□□□ -0.33
CRNDE-205ENST00000558952 C11orf86A6NJI1 115 aa12.99□□□□□ -0.33
CRNDE-205ENST00000558952 ZNF861PO60384 105 aa12.98□□□□□ -0.33
CRNDE-205ENST00000558952 PFN2P35080 140 aa12.98□□□□□ -0.33
CRNDE-205ENST00000558952 CBLN2Q8IUK8 224 aa12.98□□□□□ -0.33
CRNDE-205ENST00000558952 PRR26Q8N8Z3 221 aa12.98□□□□□ -0.33
CRNDE-205ENST00000558952 NKAPP1Q8N9T2 125 aa12.98□□□□□ -0.33
CRNDE-205ENST00000558952 CHTOPQ9Y3Y2 248 aaKnown RBP12.98□□□□□ -0.33
CRNDE-205ENST00000558952 SFTA2Q6UW10 78 aa12.96□□□□□ -0.33
CRNDE-205ENST00000558952 LINC00167Q96N53 147 aa12.96□□□□□ -0.33
CRNDE-205ENST00000558952 ERG28Q9UKR5 140 aa12.96□□□□□ -0.33
CRNDE-205ENST00000558952 IGLV1-50A0A075B6I6 118 aa12.95□□□□□ -0.34
CRNDE-205ENST00000558952 RPL37AP8A6NKH3 93 aa12.95□□□□□ -0.34
CRNDE-205ENST00000558952 IFI27L1Q96BM0 104 aa12.95□□□□□ -0.34
CRNDE-205ENST00000558952 IGLV5-37A0A075B6J1 123 aa12.94□□□□□ -0.34
CRNDE-205ENST00000558952 GAGE10A6NGK3 116 aa12.94□□□□□ -0.34
CRNDE-205ENST00000558952 HSBP1O75506 76 aa12.94□□□□□ -0.34
CRNDE-205ENST00000558952 COX17Q14061 63 aa12.94□□□□□ -0.34
CRNDE-205ENST00000558952 TRAV12-1A0A0B4J245 112 aa12.93□□□□□ -0.34
CRNDE-205ENST00000558952 BCE1O60756 84 aa12.93□□□□□ -0.34
CRNDE-205ENST00000558952 RPL28P46779 137 aaKnown RBP12.93□□□□□ -0.34
CRNDE-205ENST00000558952 ZNF625Q96I27 306 aaPredicted RBP12.93□□□□□ -0.34
CRNDE-205ENST00000558952 KRTAP1-4P0C5Y4 121 aa12.92□□□□□ -0.34
CRNDE-205ENST00000558952 RPL13AP40429 203 aaKnown RBP12.9□□□□□ -0.34
CRNDE-205ENST00000558952 SND1-IT1Q9HBX3 110 aa12.9□□□□□ -0.34
CRNDE-205ENST00000558952 UBR4Q5T4S7 5183 aa12.89□□□□□ -0.35
CRNDE-205ENST00000558952 TRGC2P03986 189 aa12.89□□□□□ -0.35
CRNDE-205ENST00000558952 TMEM223A0PJW6 202 aa12.88□□□□□ -0.35
CRNDE-205ENST00000558952 RPL24P83731 157 aaKnown RBP12.88□□□□□ -0.35
CRNDE-205ENST00000558952 FAM19A2Q8N3H0 131 aa12.88□□□□□ -0.35
CRNDE-205ENST00000558952 IGKV2-28A0A075B6P5 120 aa12.86□□□□□ -0.35
CRNDE-205ENST00000558952 IGKV2D-28P01615 120 aa12.86□□□□□ -0.35
CRNDE-205ENST00000558952 UBE2AP49459 152 aa12.86□□□□□ -0.35
CRNDE-205ENST00000558952 SCO1O75880 301 aa12.85□□□□□ -0.35
CRNDE-205ENST00000558952 VPREB1P12018 145 aa12.85□□□□□ -0.35
CRNDE-205ENST00000558952 LINC00158P58513 81 aa12.85□□□□□ -0.35
CRNDE-205ENST00000558952 SLC7A5P1Q8MH63 180 aa12.85□□□□□ -0.35
CRNDE-205ENST00000558952 H0Y8G0 127 aa12.84□□□□□ -0.35
CRNDE-205ENST00000558952 LEPROTL1O95214 131 aa12.83□□□□□ -0.36
CRNDE-205ENST00000558952 SERF1AO75920 110 aa12.82□□□□□ -0.36
CRNDE-205ENST00000558952 ATP6V1G1O75348 118 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms