RNA–Protein interactions for RNA: ENST00000558847.1

CASC4-206, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 622 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-206ENST00000558847 RBP2P50120 134 aa-0.1□□□□□ -2.43
CASC4-206ENST00000558847 PSMG4Q5JS54 123 aa-0.1□□□□□ -2.43
CASC4-206ENST00000558847 ACBD7Q8N6N7 88 aa-0.1□□□□□ -2.43
CASC4-206ENST00000558847 PRDM15P57071 1507 aaPredicted RBP-0.11□□□□□ -2.43
CASC4-206ENST00000558847 LCN9Q8WX39 176 aa-0.11□□□□□ -2.43
CASC4-206ENST00000558847 XRN1Q8IZH2 1706 aaKnown RBP-0.11□□□□□ -2.43
CASC4-206ENST00000558847 MLH3Q9UHC1 1453 aa-0.11□□□□□ -2.43
CASC4-206ENST00000558847 CSMD3Q7Z407 3707 aa-0.12□□□□□ -2.43
CASC4-206ENST00000558847 VWFP04275 2813 aa-0.12□□□□□ -2.43
CASC4-206ENST00000558847 CHD1O14646 1710 aa-0.12□□□□□ -2.43
CASC4-206ENST00000558847 NUP188Q5SRE5 1749 aa-0.12□□□□□ -2.43
CASC4-206ENST00000558847 A0A0G2JND7 137 aa-0.12□□□□□ -2.43
CASC4-206ENST00000558847 ATOX1O00244 68 aa-0.12□□□□□ -2.43
CASC4-206ENST00000558847 UQCRHP07919 91 aa-0.12□□□□□ -2.43
CASC4-206ENST00000558847 S100A10P60903 97 aa-0.12□□□□□ -2.43
CASC4-206ENST00000558847 PMCHL2Q9BQD1 86 aa-0.12□□□□□ -2.43
CASC4-206ENST00000558847 PLEKHH2Q8IVE3 1493 aa-0.12□□□□□ -2.43
CASC4-206ENST00000558847 A0A087WVE0 104 aa-0.13□□□□□ -2.43
CASC4-206ENST00000558847 A0A1B0GU69 56 aa-0.13□□□□□ -2.43
CASC4-206ENST00000558847 TRGV9Q99603 122 aa-0.13□□□□□ -2.43
CASC4-206ENST00000558847 SPTA1P02549 2419 aa-0.13□□□□□ -2.43
CASC4-206ENST00000558847 TSC2P49815 1807 aa-0.14□□□□□ -2.43
CASC4-206ENST00000558847 ATP6V1G2-DDX39BF2Z307 99 aa-0.14□□□□□ -2.43
CASC4-206ENST00000558847 FXYD6Q9H0Q3 95 aa-0.14□□□□□ -2.43
CASC4-206ENST00000558847 KIAA0556O60303 1618 aa-0.14□□□□□ -2.43
CASC4-206ENST00000558847 TEX14Q8IWB6 1497 aa-0.15□□□□□ -2.43
CASC4-206ENST00000558847 FYCO1Q9BQS8 1478 aa-0.15□□□□□ -2.43
CASC4-206ENST00000558847 ABCA3Q99758 1704 aa-0.15□□□□□ -2.43
CASC4-206ENST00000558847 CSPG4Q6UVK1 2322 aa-0.15□□□□□ -2.43
CASC4-206ENST00000558847 PRM1P04553 51 aa-0.15□□□□□ -2.43
CASC4-206ENST00000558847 KRTAP6-1Q3LI64 71 aa-0.15□□□□□ -2.43
CASC4-206ENST00000558847 C6orf201Q7Z4U5 140 aa-0.15□□□□□ -2.43
CASC4-206ENST00000558847 SERP2Q8N6R1 65 aa-0.15□□□□□ -2.43
CASC4-206ENST00000558847 DPY30Q9C005 99 aa-0.15□□□□□ -2.43
CASC4-206ENST00000558847 ABCC2Q92887 1545 aa-0.15□□□□□ -2.43
CASC4-206ENST00000558847 COL4A6Q14031 1691 aa-0.15□□□□□ -2.43
CASC4-206ENST00000558847 NLRP1Q9C000 1473 aa-0.16□□□□□ -2.43
CASC4-206ENST00000558847 LOC730098B7Z3J9 87 aa-0.16□□□□□ -2.44
CASC4-206ENST00000558847 H0Y9P7 68 aa-0.16□□□□□ -2.44
CASC4-206ENST00000558847 H7BZZ5 65 aa-0.16□□□□□ -2.44
CASC4-206ENST00000558847 MT-ATP8P03928 68 aa-0.16□□□□□ -2.44
CASC4-206ENST00000558847 DEFB105AQ8NG35 78 aa-0.16□□□□□ -2.44
CASC4-206ENST00000558847 EDC4Q6P2E9 1401 aaKnown RBP-0.16□□□□□ -2.44
CASC4-206ENST00000558847 CNTLNQ9NXG0 1405 aa-0.16□□□□□ -2.44
CASC4-206ENST00000558847 URB1O60287 2271 aaKnown RBP-0.16□□□□□ -2.44
CASC4-206ENST00000558847 PDCD11Q14690 1871 aaKnown RBP-0.16□□□□□ -2.44
CASC4-206ENST00000558847 ANKRD36BQ8N2N9 1353 aa-0.17□□□□□ -2.44
CASC4-206ENST00000558847 GNGT1P63211 74 aa-0.17□□□□□ -2.44
CASC4-206ENST00000558847 HMGN3Q15651 99 aa-0.17□□□□□ -2.44
CASC4-206ENST00000558847 PKD1L1Q8TDX9 2849 aa-0.17□□□□□ -2.44
CASC4-206ENST00000558847 RAPGEF2Q9Y4G8 1499 aa-0.17□□□□□ -2.44
CASC4-206ENST00000558847 CRIPTQ9P021 101 aa-0.18□□□□□ -2.44
CASC4-206ENST00000558847 ALKAL2Q6UX46 152 aa-0.19□□□□□ -2.44
CASC4-206ENST00000558847 FLNAP21333 2647 aaKnown RBP-0.19□□□□□ -2.44
CASC4-206ENST00000558847 ARMS2P0C7Q2 107 aa-0.2□□□□□ -2.44
CASC4-206ENST00000558847 DEFB107AQ8IZN7 70 aa-0.2□□□□□ -2.44
CASC4-206ENST00000558847 HMCN2Q8NDA2 5059 aa-0.2□□□□□ -2.44
CASC4-206ENST00000558847 EP300Q09472 2414 aaPredicted RBP-0.21□□□□□ -2.44
CASC4-206ENST00000558847 M0R143 59 aa-0.21□□□□□ -2.44
CASC4-206ENST00000558847 ASIPP42127 132 aa-0.21□□□□□ -2.44
CASC4-206ENST00000558847 COL5A1-AS1Q5SY13 56 aa-0.21□□□□□ -2.44
CASC4-206ENST00000558847 ATRQ13535 2644 aa-0.22□□□□□ -2.44
CASC4-206ENST00000558847 HUWE1Q7Z6Z7 4374 aaKnown RBP-0.22□□□□□ -2.44
CASC4-206ENST00000558847 UQCRHLA0A096LP55 91 aa-0.22□□□□□ -2.44
CASC4-206ENST00000558847 CPSF4LA6NMK7 179 aaKnown RBP-0.22□□□□□ -2.44
CASC4-206ENST00000558847 I3L3M4 83 aa-0.22□□□□□ -2.44
CASC4-206ENST00000558847 ZNF720Q7Z2F6 126 aa-0.22□□□□□ -2.44
CASC4-206ENST00000558847 MAP1BP46821 2468 aaKnown RBP-0.22□□□□□ -2.44
CASC4-206ENST00000558847 CHD8Q9HCK8 2581 aa-0.22□□□□□ -2.45
CASC4-206ENST00000558847 MYCBP2O75592 4640 aa-0.22□□□□□ -2.45
CASC4-206ENST00000558847 DNAJC13O75165 2243 aa-0.23□□□□□ -2.45
CASC4-206ENST00000558847 ZFHX3Q15911 3703 aa-0.24□□□□□ -2.45
CASC4-206ENST00000558847 MUC12Q9UKN1 5478 aa-0.24□□□□□ -2.45
CASC4-206ENST00000558847 NEBP20929 6669 aa-0.25□□□□□ -2.45
CASC4-206ENST00000558847 WNK1Q9H4A3 2382 aa-0.25□□□□□ -2.45
CASC4-206ENST00000558847 TRBV7-7A0A0K0K1E9 115 aa-0.25□□□□□ -2.45
CASC4-206ENST00000558847 FAUP35544 74 aaKnown RBP-0.25□□□□□ -2.45
CASC4-206ENST00000558847 KLK9Q2XQG4 91 aa-0.25□□□□□ -2.45
CASC4-206ENST00000558847 APLNQ9ULZ1 77 aa-0.25□□□□□ -2.45
CASC4-206ENST00000558847 VPS8Q8N3P4 1428 aa-0.25□□□□□ -2.45
CASC4-206ENST00000558847 APC2O95996 2303 aa-0.25□□□□□ -2.45
CASC4-206ENST00000558847 LRRC37AA6NMS7 1700 aa-0.26□□□□□ -2.45
CASC4-206ENST00000558847 S100A8P05109 93 aa-0.26□□□□□ -2.45
CASC4-206ENST00000558847 ETDBQ3ZM63 59 aa-0.26□□□□□ -2.45
CASC4-206ENST00000558847 NCMAPQ5T1S8 102 aa-0.26□□□□□ -2.45
CASC4-206ENST00000558847 LPAP08519 4548 aa-0.26□□□□□ -2.45
CASC4-206ENST00000558847 SHPRHQ149N8 1683 aa-0.27□□□□□ -2.45
CASC4-206ENST00000558847 TARBP1Q13395 1621 aaKnown RBP-0.27□□□□□ -2.45
CASC4-206ENST00000558847 STAB1Q9NY15 2570 aa-0.27□□□□□ -2.45
CASC4-206ENST00000558847 NKTRP30414 1462 aaKnown RBP-0.27□□□□□ -2.45
CASC4-206ENST00000558847 SPRR2BP35325 72 aa-0.27□□□□□ -2.45
CASC4-206ENST00000558847 KNDC1Q76NI1 1749 aa-0.27□□□□□ -2.45
CASC4-206ENST00000558847 EPRSP07814 1512 aaKnown RBP-0.28□□□□□ -2.45
CASC4-206ENST00000558847 M0R2T5 61 aa-0.28□□□□□ -2.45
CASC4-206ENST00000558847 TNXBP22105 4242 aa-0.28□□□□□ -2.45
CASC4-206ENST00000558847 IQSEC2Q5JU85 1478 aa-0.29□□□□□ -2.46
CASC4-206ENST00000558847 D6R8Y8 96 aa-0.29□□□□□ -2.46
CASC4-206ENST00000558847 MUSTN1Q8IVN3 82 aa-0.29□□□□□ -2.46
CASC4-206ENST00000558847 HSPG2P98160 4391 aa-0.29□□□□□ -2.46
CASC4-206ENST00000558847 NRXN1Q9ULB1 1477 aa-0.29□□□□□ -2.46
Retrieved 100 of 20,778 RNA–protein pairs in 85.3 ms