RNA–Protein interactions for RNA: ENST00000557866.1

SPG11-204, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 2

Gene SPG11, Length 468 nt, Biotype non stop decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-204ENST00000557866 SPANXB1Q9NS25 103 aaPredicted RBP4.99□□□□□ -1.61
SPG11-204ENST00000557866 K7ERJ3 54 aa4.98□□□□□ -1.61
SPG11-204ENST00000557866 IGHV3-30P01768 117 aa4.98□□□□□ -1.61
SPG11-204ENST00000557866 IGHV3-30-5P0DP03 117 aa4.98□□□□□ -1.61
SPG11-204ENST00000557866 REG3AQ06141 175 aa4.98□□□□□ -1.61
SPG11-204ENST00000557866 SS18Q15532 418 aa4.98□□□□□ -1.61
SPG11-204ENST00000557866 ADAMTSL4-AS1Q5T5F5 129 aa4.98□□□□□ -1.61
SPG11-204ENST00000557866 ENHOQ6UWT2 76 aa4.98□□□□□ -1.61
SPG11-204ENST00000557866 CHCHD10Q8WYQ3 142 aaPredicted RBP4.98□□□□□ -1.61
SPG11-204ENST00000557866 ZNF625Q96I27 306 aaPredicted RBP4.98□□□□□ -1.61
SPG11-204ENST00000557866 PRR34Q9NV39 138 aa4.98□□□□□ -1.61
SPG11-204ENST00000557866 KLK12Q9UKR0 248 aa4.98□□□□□ -1.61
SPG11-204ENST00000557866 DNAH7Q8WXX0 4024 aa4.98□□□□□ -1.61
SPG11-204ENST00000557866 IGLV10-54A0A075B6I4 117 aa4.97□□□□□ -1.61
SPG11-204ENST00000557866 A0A1B0GWB2 263 aa4.97□□□□□ -1.61
SPG11-204ENST00000557866 IGHV3-33P01772 117 aa4.97□□□□□ -1.61
SPG11-204ENST00000557866 FOXI1Q12951 378 aa4.97□□□□□ -1.61
SPG11-204ENST00000557866 KRTAP21-3Q3LHN1 58 aa4.97□□□□□ -1.61
SPG11-204ENST00000557866 CD164L2Q6UWJ8 174 aa4.97□□□□□ -1.61
SPG11-204ENST00000557866 Q9H8V8 135 aa4.97□□□□□ -1.61
SPG11-204ENST00000557866 COX11Q9Y6N1 276 aa4.97□□□□□ -1.61
SPG11-204ENST00000557866 A6NDN8 102 aa4.96□□□□□ -1.62
SPG11-204ENST00000557866 SRSF9Q13242 221 aaKnown RBP eCLIP4.96□□□□□ -1.62
SPG11-204ENST00000557866 LINC01561Q8N1V8 128 aa4.96□□□□□ -1.62
SPG11-204ENST00000557866 C15orf53Q8NAA6 179 aa4.96□□□□□ -1.62
SPG11-204ENST00000557866 COX7B2Q8TF08 81 aa4.96□□□□□ -1.62
SPG11-204ENST00000557866 LINC00476Q8WZB0 136 aa4.96□□□□□ -1.62
SPG11-204ENST00000557866 NHP2Q9NX24 153 aaKnown RBP4.96□□□□□ -1.62
SPG11-204ENST00000557866 LINC00588Q9Y4M8 146 aa4.96□□□□□ -1.62
SPG11-204ENST00000557866 IGLL5B9A064 214 aa4.95□□□□□ -1.62
SPG11-204ENST00000557866 TIMM17BO60830 172 aa4.95□□□□□ -1.62
SPG11-204ENST00000557866 SMIM13P0DJ93 91 aa4.95□□□□□ -1.62
SPG11-204ENST00000557866 KIAA0087Q14695 138 aa4.95□□□□□ -1.62
SPG11-204ENST00000557866 LINC01556Q5JQF7 62 aa4.95□□□□□ -1.62
SPG11-204ENST00000557866 KRTAP26-1Q6PEX3 210 aa4.95□□□□□ -1.62
SPG11-204ENST00000557866 MUSTN1Q8IVN3 82 aa4.95□□□□□ -1.62
SPG11-204ENST00000557866 RAB37Q96AX2 223 aa4.95□□□□□ -1.62
SPG11-204ENST00000557866 SPANXDQ9BXN6 97 aa4.95□□□□□ -1.62
SPG11-204ENST00000557866 SPANXCQ9NY87 97 aa4.95□□□□□ -1.62
SPG11-204ENST00000557866 TOMM7Q9P0U1 55 aa4.95□□□□□ -1.62
SPG11-204ENST00000557866 PLECQ15149 4684 aaKnown RBP4.95□□□□□ -1.62
SPG11-204ENST00000557866 TMEM238C9JI98 176 aa4.94□□□□□ -1.62
SPG11-204ENST00000557866 COX7A2LO14548 114 aa4.94□□□□□ -1.62
SPG11-204ENST00000557866 NHLRC4P0CG21 123 aaPredicted RBP4.94□□□□□ -1.62
SPG11-204ENST00000557866 DNAH10OSP0CZ25 163 aa4.94□□□□□ -1.62
SPG11-204ENST00000557866 MIAQ16674 131 aa4.94□□□□□ -1.62
SPG11-204ENST00000557866 DAND5Q8N907 189 aa4.94□□□□□ -1.62
SPG11-204ENST00000557866 UBE2WQ96B02 151 aa4.94□□□□□ -1.62
SPG11-204ENST00000557866 NAA38Q9BRA0 125 aaKnown RBP4.94□□□□□ -1.62
SPG11-204ENST00000557866 COL7A1Q02388 2944 aa4.94□□□□□ -1.62
SPG11-204ENST00000557866 A0A0U1RRA0 63 aa4.93□□□□□ -1.62
SPG11-204ENST00000557866 A4D1N5 150 aa4.93□□□□□ -1.62
SPG11-204ENST00000557866 CFC1BP0CG36 223 aa4.93□□□□□ -1.62
SPG11-204ENST00000557866 CFC1P0CG37 223 aa4.93□□□□□ -1.62
SPG11-204ENST00000557866 HERV-K104P63124 156 aa4.93□□□□□ -1.62
SPG11-204ENST00000557866 SOSTDC1Q6X4U4 206 aa4.93□□□□□ -1.62
SPG11-204ENST00000557866 TRAV8-4A0A0B4J246 113 aa4.92□□□□□ -1.62
SPG11-204ENST00000557866 H3BUT2 72 aa4.92□□□□□ -1.62
SPG11-204ENST00000557866 PRSS2P07478 247 aa4.92□□□□□ -1.62
SPG11-204ENST00000557866 NPC2P61916 151 aa4.92□□□□□ -1.62
SPG11-204ENST00000557866 Q8IZM0 81 aa4.92□□□□□ -1.62
SPG11-204ENST00000557866 FAM30AQ9NZY2 134 aa4.92□□□□□ -1.62
SPG11-204ENST00000557866 MEGF8Q7Z7M0 2845 aa4.92□□□□□ -1.62
SPG11-204ENST00000557866 STAB2Q8WWQ8 2551 aa4.92□□□□□ -1.62
SPG11-204ENST00000557866 LYSTQ99698 3801 aa4.91□□□□□ -1.62
SPG11-204ENST00000557866 APOMO95445 188 aa4.91□□□□□ -1.62
SPG11-204ENST00000557866 CRPP02741 224 aa4.91□□□□□ -1.62
SPG11-204ENST00000557866 IFITM1P13164 125 aa4.91□□□□□ -1.62
SPG11-204ENST00000557866 MALP21145 153 aa4.91□□□□□ -1.62
SPG11-204ENST00000557866 CCL18P55774 89 aa4.91□□□□□ -1.62
SPG11-204ENST00000557866 RPL24P83731 157 aaKnown RBP4.91□□□□□ -1.62
SPG11-204ENST00000557866 CIRBPQ14011 172 aaKnown RBP4.91□□□□□ -1.62
SPG11-204ENST00000557866 C6orf226Q5I0X4 101 aa4.91□□□□□ -1.62
SPG11-204ENST00000557866 MEIG1Q5JSS6 88 aa4.91□□□□□ -1.62
SPG11-204ENST00000557866 C2orf82Q6UX34 121 aa4.91□□□□□ -1.62
SPG11-204ENST00000557866 LINC00308Q8TCZ7 52 aa4.91□□□□□ -1.62
SPG11-204ENST00000557866 LINC00526Q96FQ7 95 aa4.91□□□□□ -1.62
SPG11-204ENST00000557866 UPK3BQ9BT76 320 aa4.91□□□□□ -1.62
SPG11-204ENST00000557866 APLNQ9ULZ1 77 aa4.91□□□□□ -1.62
SPG11-204ENST00000557866 KLK5Q9Y337 293 aaPredicted RBP4.91□□□□□ -1.62
SPG11-204ENST00000557866 STARD9Q9P2P6 4700 aa4.91□□□□□ -1.62
SPG11-204ENST00000557866 CSMD3Q7Z407 3707 aa4.9□□□□□ -1.62
SPG11-204ENST00000557866 A0A0B4J2C4 111 aa4.9□□□□□ -1.63
SPG11-204ENST00000557866 A0A1W2PPM0 123 aa4.9□□□□□ -1.63
SPG11-204ENST00000557866 IBA57-AS1B1ANH7 110 aa4.9□□□□□ -1.63
SPG11-204ENST00000557866 VAMP3Q15836 100 aa4.9□□□□□ -1.63
SPG11-204ENST00000557866 C10orf25Q5T742 122 aa4.9□□□□□ -1.63
SPG11-204ENST00000557866 C6orf223Q8N319 242 aa4.9□□□□□ -1.63
SPG11-204ENST00000557866 NTN5Q8WTR8 489 aaPredicted RBP4.9□□□□□ -1.63
SPG11-204ENST00000557866 VPS13DQ5THJ4 4388 aa4.9□□□□□ -1.63
SPG11-204ENST00000557866 TSPAN13O95857 204 aa4.89□□□□□ -1.63
SPG11-204ENST00000557866 SPAG11BQ08648 103 aa4.89□□□□□ -1.63
SPG11-204ENST00000557866 UBE2V1Q13404 147 aa4.89□□□□□ -1.63
SPG11-204ENST00000557866 UNQ6190/PRO20217Q6UXQ8 127 aa4.89□□□□□ -1.63
SPG11-204ENST00000557866 MIR7-3HGQ8N6C7 128 aa4.89□□□□□ -1.63
SPG11-204ENST00000557866 ERG28Q9UKR5 140 aa4.89□□□□□ -1.63
SPG11-204ENST00000557866 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.88□□□□□ -1.63
SPG11-204ENST00000557866 PFN2P35080 140 aa4.88□□□□□ -1.63
SPG11-204ENST00000557866 CXCL5P42830 114 aa4.88□□□□□ -1.63
SPG11-204ENST00000557866 LINC00158P58513 81 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 118.9 ms