RNA–Protein interactions for RNA: ENST00000557572.1

FOXN3-217, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-217ENST00000557572 NDUFA11Q86Y39 141 aa1.71□□□□□ -2.14
FOXN3-217ENST00000557572 FAM223AQ8IWN6 122 aa1.71□□□□□ -2.14
FOXN3-217ENST00000557572 FAM167A-AS1Q96KT0 104 aa1.71□□□□□ -2.14
FOXN3-217ENST00000557572 RABAC1Q9UI14 185 aa1.71□□□□□ -2.14
FOXN3-217ENST00000557572 UTP20O75691 2785 aaKnown RBP1.71□□□□□ -2.14
FOXN3-217ENST00000557572 BRWD1Q9NSI6 2320 aa1.71□□□□□ -2.14
FOXN3-217ENST00000557572 ITPR2Q14571 2701 aa1.7□□□□□ -2.14
FOXN3-217ENST00000557572 A0A0J9YY99 117 aa1.7□□□□□ -2.14
FOXN3-217ENST00000557572 TRBV6-4A0A1B0GX49 114 aa1.7□□□□□ -2.14
FOXN3-217ENST00000557572 NDUFC1O43677 76 aa1.7□□□□□ -2.14
FOXN3-217ENST00000557572 ATMQ13315 3056 aa1.7□□□□□ -2.14
FOXN3-217ENST00000557572 CDC42BPAQ5VT25 1732 aa1.7□□□□□ -2.14
FOXN3-217ENST00000557572 HIVEP2P31629 2446 aa1.7□□□□□ -2.14
FOXN3-217ENST00000557572 FN1P02751 2386 aaKnown RBP1.7□□□□□ -2.14
FOXN3-217ENST00000557572 DLEC1Q9Y238 1755 aa1.7□□□□□ -2.14
FOXN3-217ENST00000557572 EIF2AK4Q9P2K8 1649 aaKnown RBP1.69□□□□□ -2.14
FOXN3-217ENST00000557572 BAZ2BQ9UIF8 2168 aaKnown RBP1.69□□□□□ -2.14
FOXN3-217ENST00000557572 COL5A3P25940 1745 aaPredicted RBP1.69□□□□□ -2.14
FOXN3-217ENST00000557572 JMJD1CQ15652 2540 aa1.69□□□□□ -2.14
FOXN3-217ENST00000557572 ANKARQ7Z5J8 1434 aa1.69□□□□□ -2.14
FOXN3-217ENST00000557572 IGKV2-28A0A075B6P5 120 aa1.69□□□□□ -2.14
FOXN3-217ENST00000557572 TRAV23DV6A0A075B6W5 121 aa1.69□□□□□ -2.14
FOXN3-217ENST00000557572 SPRR5A0A1B0GTR4 108 aa1.69□□□□□ -2.14
FOXN3-217ENST00000557572 CHKB-CPT1BH3BT56 60 aa1.69□□□□□ -2.14
FOXN3-217ENST00000557572 H3BUT2 72 aa1.69□□□□□ -2.14
FOXN3-217ENST00000557572 J3QKU1 62 aa1.69□□□□□ -2.14
FOXN3-217ENST00000557572 PPYP01298 95 aa1.69□□□□□ -2.14
FOXN3-217ENST00000557572 IGKV2D-28P01615 120 aa1.69□□□□□ -2.14
FOXN3-217ENST00000557572 IGLV6-57P01721 117 aa1.69□□□□□ -2.14
FOXN3-217ENST00000557572 C10orf55Q5SWW7 151 aa1.69□□□□□ -2.14
FOXN3-217ENST00000557572 PRR9Q5T870 116 aa1.69□□□□□ -2.14
FOXN3-217ENST00000557572 C4orf3Q8WVX3 66 aa1.69□□□□□ -2.14
FOXN3-217ENST00000557572 NDUFA4L2Q9NRX3 87 aa1.69□□□□□ -2.14
FOXN3-217ENST00000557572 PRO1854Q9UHT4 67 aa1.69□□□□□ -2.14
FOXN3-217ENST00000557572 SCN7AQ01118 1682 aa1.69□□□□□ -2.14
FOXN3-217ENST00000557572 LMO7Q8WWI1 1683 aa1.69□□□□□ -2.14
FOXN3-217ENST00000557572 KDM3BQ7LBC6 1761 aa1.69□□□□□ -2.14
FOXN3-217ENST00000557572 DNHD1Q96M86 4753 aa1.68□□□□□ -2.14
FOXN3-217ENST00000557572 JMJD7-PLA2G4BH0Y9G9 81 aa1.68□□□□□ -2.14
FOXN3-217ENST00000557572 H3BRN7 92 aa1.68□□□□□ -2.14
FOXN3-217ENST00000557572 IGHV3-30P01768 117 aa1.68□□□□□ -2.14
FOXN3-217ENST00000557572 IGHV3-30-5P0DP03 117 aa1.68□□□□□ -2.14
FOXN3-217ENST00000557572 EDDM3BP56851 147 aa1.68□□□□□ -2.14
FOXN3-217ENST00000557572 ZNF56Q15929 161 aa1.68□□□□□ -2.14
FOXN3-217ENST00000557572 PMCHL1Q16048 86 aa1.68□□□□□ -2.14
FOXN3-217ENST00000557572 LINC00299Q6ZSB3 139 aa1.68□□□□□ -2.14
FOXN3-217ENST00000557572 C20orf197Q8N268 126 aa1.68□□□□□ -2.14
FOXN3-217ENST00000557572 CDC42SE2Q9NRR3 84 aa1.68□□□□□ -2.14
FOXN3-217ENST00000557572 IGF2RP11717 2491 aa1.68□□□□□ -2.14
FOXN3-217ENST00000557572 CCDC168Q8NDH2 2452 aa1.68□□□□□ -2.14
FOXN3-217ENST00000557572 CELSR2Q9HCU4 2923 aa1.68□□□□□ -2.14
FOXN3-217ENST00000557572 LY75O60449 1722 aa1.68□□□□□ -2.14
FOXN3-217ENST00000557572 C4AP0C0L4 1744 aa1.68□□□□□ -2.14
FOXN3-217ENST00000557572 ARFGEF3Q5TH69 2177 aa1.68□□□□□ -2.14
FOXN3-217ENST00000557572 DOCK10Q96BY6 2186 aa1.68□□□□□ -2.14
FOXN3-217ENST00000557572 SSC5DA1L4H1 1573 aa1.68□□□□□ -2.14
FOXN3-217ENST00000557572 ALS2Q96Q42 1657 aa1.67□□□□□ -2.14
FOXN3-217ENST00000557572 AKAP13Q12802 2813 aa1.67□□□□□ -2.14
FOXN3-217ENST00000557572 SPTBP11277 2137 aa1.67□□□□□ -2.14
FOXN3-217ENST00000557572 ARFGEF2Q9Y6D5 1785 aa1.67□□□□□ -2.14
FOXN3-217ENST00000557572 FCGBPQ9Y6R7 5405 aaPredicted RBP1.67□□□□□ -2.14
FOXN3-217ENST00000557572 PDCD11Q14690 1871 aaKnown RBP1.67□□□□□ -2.14
FOXN3-217ENST00000557572 OTOGLQ3ZCN5 2332 aa1.67□□□□□ -2.14
FOXN3-217ENST00000557572 DOCK11Q5JSL3 2073 aa1.67□□□□□ -2.14
FOXN3-217ENST00000557572 MED12Q93074 2177 aa1.67□□□□□ -2.14
FOXN3-217ENST00000557572 TJP1Q07157 1748 aa1.67□□□□□ -2.14
FOXN3-217ENST00000557572 TRBV6-7A0A0A0MS04 114 aa1.67□□□□□ -2.14
FOXN3-217ENST00000557572 IGLV3-19P01714 112 aa1.67□□□□□ -2.14
FOXN3-217ENST00000557572 PDE6GP18545 87 aa1.67□□□□□ -2.14
FOXN3-217ENST00000557572 KLKP1Q107X0 134 aa1.67□□□□□ -2.14
FOXN3-217ENST00000557572 SPATA45Q537H7 98 aa1.67□□□□□ -2.14
FOXN3-217ENST00000557572 HEPN1Q6WQI6 88 aa1.67□□□□□ -2.14
FOXN3-217ENST00000557572 LINC01600Q96MT4 127 aa1.67□□□□□ -2.14
FOXN3-217ENST00000557572 C5P01031 1676 aa1.67□□□□□ -2.14
FOXN3-217ENST00000557572 RGPD2P0DJD1 1756 aa1.67□□□□□ -2.14
FOXN3-217ENST00000557572 ABCC6O95255 1503 aa1.66□□□□□ -2.14
FOXN3-217ENST00000557572 USP9YO00507 2555 aaPredicted RBP1.66□□□□□ -2.14
FOXN3-217ENST00000557572 LRRC37A2A6NM11 1700 aa1.66□□□□□ -2.14
FOXN3-217ENST00000557572 LAMA4Q16363 1823 aa1.66□□□□□ -2.14
FOXN3-217ENST00000557572 ADGRG4Q8IZF6 3080 aa1.66□□□□□ -2.14
FOXN3-217ENST00000557572 PRRC2BQ5JSZ5 2229 aaKnown RBP1.66□□□□□ -2.14
FOXN3-217ENST00000557572 NBPF19A0A087WUL8 3843 aa1.66□□□□□ -2.14
FOXN3-217ENST00000557572 IGKV3D-7A0A0C4DH55 119 aa1.66□□□□□ -2.14
FOXN3-217ENST00000557572 IGKV3OR2-268A0A0C4DH90 116 aa1.66□□□□□ -2.14
FOXN3-217ENST00000557572 LOC101927531A0A1B0GV80 90 aa1.66□□□□□ -2.14
FOXN3-217ENST00000557572 F2Z2F3 143 aa1.66□□□□□ -2.14
FOXN3-217ENST00000557572 HMGN4O00479 90 aa1.66□□□□□ -2.14
FOXN3-217ENST00000557572 CFAP126Q5VTH2 177 aa1.66□□□□□ -2.14
FOXN3-217ENST00000557572 C18orf32Q8TCD1 76 aa1.66□□□□□ -2.14
FOXN3-217ENST00000557572 WFDC10AQ9H1F0 79 aa1.66□□□□□ -2.14
FOXN3-217ENST00000557572 E9PCH4 1651 aa1.66□□□□□ -2.14
FOXN3-217ENST00000557572 GCC2Q8IWJ2 1684 aa1.66□□□□□ -2.14
FOXN3-217ENST00000557572 LOC285556D6RIA3 1793 aa1.66□□□□□ -2.14
FOXN3-217ENST00000557572 OTOGQ6ZRI0 2925 aa1.66□□□□□ -2.14
FOXN3-217ENST00000557572 FLNAP21333 2647 aaKnown RBP1.66□□□□□ -2.14
FOXN3-217ENST00000557572 C4BP0C0L5 1744 aa1.66□□□□□ -2.14
FOXN3-217ENST00000557572 ABCA4P78363 2273 aa1.65□□□□□ -2.14
FOXN3-217ENST00000557572 UBR3Q6ZT12 1888 aa1.65□□□□□ -2.14
FOXN3-217ENST00000557572 DCHS2Q6V1P9 2916 aa1.65□□□□□ -2.14
FOXN3-217ENST00000557572 MRC1P22897 1456 aa1.65□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms