RNA–Protein interactions for RNA: ENST00000557477.1

PRPF39-212, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 724 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-212ENST00000557477 TTTY10Q9BZA0 68 aa2.57□□□□□ -2
PRPF39-212ENST00000557477 ZNF492Q9P255 531 aa2.57□□□□□ -2
PRPF39-212ENST00000557477 NBEAL2Q6ZNJ1 2754 aa2.57□□□□□ -2
PRPF39-212ENST00000557477 VWFP04275 2813 aa2.56□□□□□ -2
PRPF39-212ENST00000557477 IGLV2-18A0A075B6J9 118 aa2.56□□□□□ -2
PRPF39-212ENST00000557477 A0A0B4J2C4 111 aa2.56□□□□□ -2
PRPF39-212ENST00000557477 SPRR5A0A1B0GTR4 108 aa2.56□□□□□ -2
PRPF39-212ENST00000557477 A8MUU9 505 aa2.56□□□□□ -2
PRPF39-212ENST00000557477 H3BUX3 64 aa2.56□□□□□ -2
PRPF39-212ENST00000557477 M0R378 163 aa2.56□□□□□ -2
PRPF39-212ENST00000557477 PSPHP1O15172 72 aa2.56□□□□□ -2
PRPF39-212ENST00000557477 LTAP01374 205 aa2.56□□□□□ -2
PRPF39-212ENST00000557477 RNASE2P10153 161 aaKnown RBP2.56□□□□□ -2
PRPF39-212ENST00000557477 FCER1GP30273 86 aa2.56□□□□□ -2
PRPF39-212ENST00000557477 HBBP68871 147 aa2.56□□□□□ -2
PRPF39-212ENST00000557477 PRB3Q04118 309 aaPredicted RBP2.56□□□□□ -2
PRPF39-212ENST00000557477 SS18Q15532 418 aa2.56□□□□□ -2
PRPF39-212ENST00000557477 SPANXA2-OT1Q8N9U9 137 aa2.56□□□□□ -2
PRPF39-212ENST00000557477 TAS2R4Q9NYW5 299 aa2.56□□□□□ -2
PRPF39-212ENST00000557477 U3KQK5 164 aa2.56□□□□□ -2
PRPF39-212ENST00000557477 TRRAPQ9Y4A5 3859 aa2.55□□□□□ -2
PRPF39-212ENST00000557477 TEX49A0A1B0GTD5 131 aa2.55□□□□□ -2
PRPF39-212ENST00000557477 TMEM14DPA8MWL7 114 aa2.55□□□□□ -2
PRPF39-212ENST00000557477 TMEM256-PLSCR3K7ERE1 68 aa2.55□□□□□ -2
PRPF39-212ENST00000557477 NDUFC1O43677 76 aa2.55□□□□□ -2
PRPF39-212ENST00000557477 FSTL3O95633 263 aa2.55□□□□□ -2
PRPF39-212ENST00000557477 IGKV1D-33P01593 117 aa2.55□□□□□ -2
PRPF39-212ENST00000557477 IGKV1-33P01594 117 aa2.55□□□□□ -2
PRPF39-212ENST00000557477 CD28P10747 220 aa2.55□□□□□ -2
PRPF39-212ENST00000557477 UBE2BP63146 152 aa2.55□□□□□ -2
PRPF39-212ENST00000557477 IGFL1Q6UW32 110 aa2.55□□□□□ -2
PRPF39-212ENST00000557477 SDIM1Q6ZPB5 146 aa2.55□□□□□ -2
PRPF39-212ENST00000557477 LCA10Q71F78 164 aa2.55□□□□□ -2
PRPF39-212ENST00000557477 NDUFA11Q86Y39 141 aa2.55□□□□□ -2
PRPF39-212ENST00000557477 Q8N8P6 123 aa2.55□□□□□ -2
PRPF39-212ENST00000557477 TMEM75Q8N9X5 138 aa2.55□□□□□ -2
PRPF39-212ENST00000557477 FXYD5Q96DB9 178 aa2.55□□□□□ -2
PRPF39-212ENST00000557477 RMI2Q96E14 147 aa2.55□□□□□ -2
PRPF39-212ENST00000557477 SLC50A1Q9BRV3 221 aa2.55□□□□□ -2
PRPF39-212ENST00000557477 WNK1Q9H4A3 2382 aa2.55□□□□□ -2
PRPF39-212ENST00000557477 PRKDCP78527 4128 aaKnown RBP2.54□□□□□ -2
PRPF39-212ENST00000557477 IGKV1D-42A0A075B6H8 117 aa2.54□□□□□ -2
PRPF39-212ENST00000557477 TRBV7-1A0A0A6YYK4 115 aa2.54□□□□□ -2
PRPF39-212ENST00000557477 IGHV1-3A0A0C4DH29 117 aa2.54□□□□□ -2
PRPF39-212ENST00000557477 C3orf84H3BNL1 204 aa2.54□□□□□ -2
PRPF39-212ENST00000557477 K7EIL1 84 aa2.54□□□□□ -2
PRPF39-212ENST00000557477 BCE1O60756 84 aa2.54□□□□□ -2
PRPF39-212ENST00000557477 CCKP06307 115 aa2.54□□□□□ -2
PRPF39-212ENST00000557477 CKS2P33552 79 aa2.54□□□□□ -2
PRPF39-212ENST00000557477 IFI27P40305 119 aaPredicted RBP2.54□□□□□ -2
PRPF39-212ENST00000557477 RBM3P98179 157 aaKnown RBP2.54□□□□□ -2
PRPF39-212ENST00000557477 FXYD3Q14802 87 aa2.54□□□□□ -2
PRPF39-212ENST00000557477 KRTAP13-2Q52LG2 175 aa2.54□□□□□ -2
PRPF39-212ENST00000557477 KPRPQ5T749 579 aaPredicted RBP2.54□□□□□ -2
PRPF39-212ENST00000557477 GDF5OSQ5U4N7 250 aa2.54□□□□□ -2
PRPF39-212ENST00000557477 C2orf82Q6UX34 121 aa2.54□□□□□ -2
PRPF39-212ENST00000557477 SPTSSAQ969W0 71 aa2.54□□□□□ -2
PRPF39-212ENST00000557477 TOMM6Q96B49 74 aa2.54□□□□□ -2
PRPF39-212ENST00000557477 NABP2Q9BQ15 211 aa2.54□□□□□ -2
PRPF39-212ENST00000557477 PSENENQ9NZ42 101 aa2.54□□□□□ -2
PRPF39-212ENST00000557477 IGKV2D-26A0A0A0MRZ7 120 aa2.53□□□□□ -2
PRPF39-212ENST00000557477 TRAV3A0A0B4J244 114 aa2.53□□□□□ -2
PRPF39-212ENST00000557477 A8MUN3 132 aa2.53□□□□□ -2
PRPF39-212ENST00000557477 IQCF6A8MYZ5 107 aa2.53□□□□□ -2
PRPF39-212ENST00000557477 IBA57-AS1B1ANH7 110 aa2.53□□□□□ -2
PRPF39-212ENST00000557477 M0R381 172 aa2.53□□□□□ -2
PRPF39-212ENST00000557477 LST1O00453 97 aa2.53□□□□□ -2
PRPF39-212ENST00000557477 KISS1Q15726 138 aa2.53□□□□□ -2
PRPF39-212ENST00000557477 LUZP6Q538Z0 58 aa2.53□□□□□ -2
PRPF39-212ENST00000557477 C10orf128Q5T292 105 aa2.53□□□□□ -2
PRPF39-212ENST00000557477 Q6JHZ5 121 aa2.53□□□□□ -2
PRPF39-212ENST00000557477 PHF5AQ7RTV0 110 aaKnown RBP2.53□□□□□ -2
PRPF39-212ENST00000557477 LYPD6Q86Y78 171 aa2.53□□□□□ -2
PRPF39-212ENST00000557477 Q8N2B8 174 aa2.53□□□□□ -2
PRPF39-212ENST00000557477 FAM216BQ8N7L0 139 aa2.53□□□□□ -2
PRPF39-212ENST00000557477 ST20-AS1Q8NBB2 130 aa2.53□□□□□ -2
PRPF39-212ENST00000557477 PFN4Q8NHR9 129 aa2.53□□□□□ -2
PRPF39-212ENST00000557477 MUC7Q8TAX7 377 aa2.53□□□□□ -2
PRPF39-212ENST00000557477 CCL13Q99616 98 aa2.53□□□□□ -2
PRPF39-212ENST00000557477 B9D2Q9BPU9 175 aa2.53□□□□□ -2
PRPF39-212ENST00000557477 WFDC6Q9BQY6 131 aa2.53□□□□□ -2
PRPF39-212ENST00000557477 LINC00588Q9Y4M8 146 aa2.53□□□□□ -2
PRPF39-212ENST00000557477 TIMM8BQ9Y5J9 83 aaPredicted RBP2.53□□□□□ -2
PRPF39-212ENST00000557477 TANC2Q9HCD6 1990 aa2.52□□□□□ -2.01
PRPF39-212ENST00000557477 WNK2Q9Y3S1 2297 aa2.52□□□□□ -2.01
PRPF39-212ENST00000557477 TRAV8-3A0A0A6YYJ7 113 aa2.52□□□□□ -2.01
PRPF39-212ENST00000557477 IGHV6-1A0A0B4J1U7 121 aa2.52□□□□□ -2.01
PRPF39-212ENST00000557477 IGKV1D-43A0A0B4J1Z2 117 aa2.52□□□□□ -2.01
PRPF39-212ENST00000557477 H7BZZ5 65 aa2.52□□□□□ -2.01
PRPF39-212ENST00000557477 K7EMI3 77 aa2.52□□□□□ -2.01
PRPF39-212ENST00000557477 ZNF22P17026 224 aaPredicted RBP2.52□□□□□ -2.01
PRPF39-212ENST00000557477 XCL1P47992 114 aa2.52□□□□□ -2.01
PRPF39-212ENST00000557477 ZNF80P51504 273 aaPredicted RBP2.52□□□□□ -2.01
PRPF39-212ENST00000557477 FAM27BQ5VT28 67 aa2.52□□□□□ -2.01
PRPF39-212ENST00000557477 CLEC19AQ6UXS0 136 aa2.52□□□□□ -2.01
PRPF39-212ENST00000557477 ZNF826PQ6ZT77 177 aa2.52□□□□□ -2.01
PRPF39-212ENST00000557477 FAM19A3Q7Z5A8 133 aa2.52□□□□□ -2.01
PRPF39-212ENST00000557477 FAM223AQ8IWN6 122 aa2.52□□□□□ -2.01
PRPF39-212ENST00000557477 SLC25A29Q8N8R3 303 aa2.52□□□□□ -2.01
PRPF39-212ENST00000557477 DAND5Q8N907 189 aa2.52□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms