RNA–Protein interactions for RNA: ENST00000557431.5

SLIRP-210, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 725 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-210ENST00000557431 CYSLTR1Q9Y271 337 aa8.35□□□□□ -1.07
SLIRP-210ENST00000557431 A0A087X002 238 aa8.34□□□□□ -1.07
SLIRP-210ENST00000557431 TRBV30A0A0K0K1B3 111 aa8.34□□□□□ -1.07
SLIRP-210ENST00000557431 NDUFC2-KCTD14E9PQ53 114 aa8.34□□□□□ -1.07
SLIRP-210ENST00000557431 SNAPINO95295 136 aa8.34□□□□□ -1.07
SLIRP-210ENST00000557431 RPL13AP40429 203 aaKnown RBP8.34□□□□□ -1.07
SLIRP-210ENST00000557431 SVBPQ8N300 66 aa8.34□□□□□ -1.07
SLIRP-210ENST00000557431 PACRGQ96M98 296 aaPredicted RBP8.34□□□□□ -1.07
SLIRP-210ENST00000557431 ALKBH7Q9BT30 221 aaPredicted RBP8.34□□□□□ -1.07
SLIRP-210ENST00000557431 XAGE1AQ9HD64 81 aa8.34□□□□□ -1.07
SLIRP-210ENST00000557431 TOMM7Q9P0U1 55 aa8.34□□□□□ -1.07
SLIRP-210ENST00000557431 TMEM141Q96I45 108 aa8.33□□□□□ -1.08
SLIRP-210ENST00000557431 MRPL18Q9H0U6 180 aaKnown RBP8.33□□□□□ -1.08
SLIRP-210ENST00000557431 ZNF861PO60384 105 aa8.32□□□□□ -1.08
SLIRP-210ENST00000557431 FABP9Q0Z7S8 132 aa8.32□□□□□ -1.08
SLIRP-210ENST00000557431 C22orf24Q9Y442 160 aa8.32□□□□□ -1.08
SLIRP-210ENST00000557431 IGIPA6NJ69 53 aa8.31□□□□□ -1.08
SLIRP-210ENST00000557431 NPSP0C0P6 89 aa8.31□□□□□ -1.08
SLIRP-210ENST00000557431 G0S2P27469 103 aa8.31□□□□□ -1.08
SLIRP-210ENST00000557431 TEX43Q6ZNM6 134 aa8.31□□□□□ -1.08
SLIRP-210ENST00000557431 LINC00173Q6ZV60 143 aa8.31□□□□□ -1.08
SLIRP-210ENST00000557431 ANAPC11Q9NYG5 84 aa8.31□□□□□ -1.08
SLIRP-210ENST00000557431 LINC01546A6NGU7 62 aa8.3□□□□□ -1.08
SLIRP-210ENST00000557431 AMELXQ99217 191 aa8.3□□□□□ -1.08
SLIRP-210ENST00000557431 RETNLBQ9BQ08 111 aa8.3□□□□□ -1.08
SLIRP-210ENST00000557431 Q6ZN92 141 aa8.29□□□□□ -1.08
SLIRP-210ENST00000557431 TOMM6Q96B49 74 aa8.29□□□□□ -1.08
SLIRP-210ENST00000557431 VCX2Q9H322 139 aa8.29□□□□□ -1.08
SLIRP-210ENST00000557431 MUC17Q685J3 4493 aa8.29□□□□□ -1.08
SLIRP-210ENST00000557431 A0A0U1RQV1 116 aa8.28□□□□□ -1.08
SLIRP-210ENST00000557431 LCE2AQ5TA79 106 aaPredicted RBP8.28□□□□□ -1.08
SLIRP-210ENST00000557431 TIMM17AQ99595 171 aa8.28□□□□□ -1.08
SLIRP-210ENST00000557431 C2orf88Q9BSF0 95 aa8.28□□□□□ -1.08
SLIRP-210ENST00000557431 TRAPPC1Q9Y5R8 145 aa8.28□□□□□ -1.08
SLIRP-210ENST00000557431 PRSS2P07478 247 aa8.27□□□□□ -1.09
SLIRP-210ENST00000557431 PAPPA-AS1Q5QFB9 102 aa8.27□□□□□ -1.09
SLIRP-210ENST00000557431 FAT4Q6V0I7 4981 aa8.26□□□□□ -1.09
SLIRP-210ENST00000557431 LINC01549A6NIU2 74 aa8.26□□□□□ -1.09
SLIRP-210ENST00000557431 RPL37AP8A6NKH3 93 aa8.26□□□□□ -1.09
SLIRP-210ENST00000557431 NUPR1O60356 82 aa8.26□□□□□ -1.09
SLIRP-210ENST00000557431 CKS1BP61024 79 aa8.26□□□□□ -1.09
SLIRP-210ENST00000557431 FA2HQ7L5A8 372 aa8.26□□□□□ -1.09
SLIRP-210ENST00000557431 ERASQ7Z444 233 aa8.26□□□□□ -1.09
SLIRP-210ENST00000557431 FAM19A3Q7Z5A8 133 aa8.26□□□□□ -1.09
SLIRP-210ENST00000557431 TYMSOSQ8TAI1 123 aa8.26□□□□□ -1.09
SLIRP-210ENST00000557431 YPEL4Q96NS1 127 aa8.26□□□□□ -1.09
SLIRP-210ENST00000557431 C6orf226Q5I0X4 101 aa8.25□□□□□ -1.09
SLIRP-210ENST00000557431 SLC7A5P1Q8MH63 180 aa8.25□□□□□ -1.09
SLIRP-210ENST00000557431 C18orf32Q8TCD1 76 aa8.25□□□□□ -1.09
SLIRP-210ENST00000557431 SCGB3A1Q96QR1 104 aa8.25□□□□□ -1.09
SLIRP-210ENST00000557431 SMCO4Q9NRQ5 59 aa8.25□□□□□ -1.09
SLIRP-210ENST00000557431 GAGE10A6NGK3 116 aa8.24□□□□□ -1.09
SLIRP-210ENST00000557431 KRTAP13-2Q52LG2 175 aa8.24□□□□□ -1.09
SLIRP-210ENST00000557431 MRPL55Q7Z7F7 128 aaKnown RBP8.24□□□□□ -1.09
SLIRP-210ENST00000557431 Q8IZM0 81 aa8.24□□□□□ -1.09
SLIRP-210ENST00000557431 LINC01561Q8N1V8 128 aa8.24□□□□□ -1.09
SLIRP-210ENST00000557431 URB1-AS1Q96HZ7 61 aa8.23□□□□□ -1.09
SLIRP-210ENST00000557431 CDKN2A-AS1Q9UH64 79 aa8.23□□□□□ -1.09
SLIRP-210ENST00000557431 BCE1O60756 84 aa8.22□□□□□ -1.09
SLIRP-210ENST00000557431 LINC00614P0C842 121 aa8.22□□□□□ -1.09
SLIRP-210ENST00000557431 CRYGAP11844 174 aa8.22□□□□□ -1.09
SLIRP-210ENST00000557431 RPL28P46779 137 aaKnown RBP8.22□□□□□ -1.09
SLIRP-210ENST00000557431 HERVK_113P63121 156 aa8.22□□□□□ -1.09
SLIRP-210ENST00000557431 SEC11AP67812 179 aa8.22□□□□□ -1.09
SLIRP-210ENST00000557431 LBHQ53QV2 105 aaPredicted RBP8.22□□□□□ -1.09
SLIRP-210ENST00000557431 LINC00167Q96N53 147 aa8.22□□□□□ -1.09
SLIRP-210ENST00000557431 SCO1O75880 301 aa8.21□□□□□ -1.1
SLIRP-210ENST00000557431 CBLN2Q8IUK8 224 aa8.21□□□□□ -1.1
SLIRP-210ENST00000557431 A0A096LNJ9 63 aa8.2□□□□□ -1.1
SLIRP-210ENST00000557431 GEMIN7Q9H840 131 aaKnown RBP8.2□□□□□ -1.1
SLIRP-210ENST00000557431 KRTAP9-6A0A140TA67 174 aa8.19□□□□□ -1.1
SLIRP-210ENST00000557431 F8VRH5 84 aa8.19□□□□□ -1.1
SLIRP-210ENST00000557431 RAB5BP61020 215 aa8.19□□□□□ -1.1
SLIRP-210ENST00000557431 CST9LQ9H4G1 147 aa8.19□□□□□ -1.1
SLIRP-210ENST00000557431 TP73-AS1Q9UF72 201 aa8.19□□□□□ -1.1
SLIRP-210ENST00000557431 TINCRA0A1B0GVN0 87 aa8.18□□□□□ -1.1
SLIRP-210ENST00000557431 PMVKQ15126 192 aa8.18□□□□□ -1.1
SLIRP-210ENST00000557431 HBDP02042 147 aa8.17□□□□□ -1.1
SLIRP-210ENST00000557431 UBE2AP49459 152 aa8.17□□□□□ -1.1
SLIRP-210ENST00000557431 LINC00304Q8N9R0 145 aa8.17□□□□□ -1.1
SLIRP-210ENST00000557431 IGKV2-28A0A075B6P5 120 aa8.16□□□□□ -1.1
SLIRP-210ENST00000557431 IGLV5-45A0A087WSX0 123 aa8.16□□□□□ -1.1
SLIRP-210ENST00000557431 SMIM1B2RUZ4 78 aa8.16□□□□□ -1.1
SLIRP-210ENST00000557431 IGKV2D-28P01615 120 aa8.16□□□□□ -1.1
SLIRP-210ENST00000557431 PRLHP81277 87 aa8.16□□□□□ -1.1
SLIRP-210ENST00000557431 PMCHL1Q16048 86 aa8.16□□□□□ -1.1
SLIRP-210ENST00000557431 PDZD11Q5EBL8 140 aa8.16□□□□□ -1.1
SLIRP-210ENST00000557431 KRTAP13-1Q8IUC0 172 aa8.16□□□□□ -1.1
SLIRP-210ENST00000557431 COX7B2Q8TF08 81 aa8.15□□□□□ -1.1
SLIRP-210ENST00000557431 CDIP1Q9H305 208 aa8.15□□□□□ -1.1
SLIRP-210ENST00000557431 SPINK8P0C7L1 97 aa8.14□□□□□ -1.11
SLIRP-210ENST00000557431 CHCHD1Q96BP2 118 aaKnown RBP8.14□□□□□ -1.11
SLIRP-210ENST00000557431 IGLV7-46A0A075B6I9 117 aa8.13□□□□□ -1.11
SLIRP-210ENST00000557431 ATP5LO75964 103 aa8.13□□□□□ -1.11
SLIRP-210ENST00000557431 TRGC2P03986 189 aa8.13□□□□□ -1.11
SLIRP-210ENST00000557431 CXCL5P42830 114 aa8.13□□□□□ -1.11
SLIRP-210ENST00000557431 NDUFA6P56556 154 aa8.13□□□□□ -1.11
SLIRP-210ENST00000557431 NKAPP1Q8N9T2 125 aa8.13□□□□□ -1.11
SLIRP-210ENST00000557431 COLCA2A8K830 154 aa8.12□□□□□ -1.11
SLIRP-210ENST00000557431 IGLC3P0DOY3 106 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms