RNA–Protein interactions for RNA: ENST00000557311.5

ATXN3-247, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-247ENST00000557311 TRBV10-2A0A0K0K1G8 114 aa3.4□□□□□ -1.87
ATXN3-247ENST00000557311 C19orf71A6NCJ1 209 aa3.4□□□□□ -1.87
ATXN3-247ENST00000557311 LINC01549A6NIU2 74 aa3.4□□□□□ -1.87
ATXN3-247ENST00000557311 TIMM17BO60830 172 aa3.4□□□□□ -1.87
ATXN3-247ENST00000557311 HBDP02042 147 aa3.4□□□□□ -1.87
ATXN3-247ENST00000557311 HIST1H4AP62805 103 aaKnown RBP3.4□□□□□ -1.87
ATXN3-247ENST00000557311 EIF4EBP1Q13541 118 aaPredicted RBP3.4□□□□□ -1.87
ATXN3-247ENST00000557311 MIC13Q5XKP0 118 aa3.4□□□□□ -1.87
ATXN3-247ENST00000557311 LYPD1Q8N2G4 141 aa3.4□□□□□ -1.87
ATXN3-247ENST00000557311 PSENENQ9NZ42 101 aa3.4□□□□□ -1.87
ATXN3-247ENST00000557311 DMBT1Q9UGM3 2413 aaPredicted RBP3.4□□□□□ -1.87
ATXN3-247ENST00000557311 TRBV20OR9-2A0A075B6H5 130 aa3.39□□□□□ -1.87
ATXN3-247ENST00000557311 TRBV7-3A0A075B6L6 115 aa3.39□□□□□ -1.87
ATXN3-247ENST00000557311 TRAV3A0A0B4J244 114 aa3.39□□□□□ -1.87
ATXN3-247ENST00000557311 A0A0B4J2C4 111 aa3.39□□□□□ -1.87
ATXN3-247ENST00000557311 C8orf87E5RJ46 101 aa3.39□□□□□ -1.87
ATXN3-247ENST00000557311 F6UB75 175 aa3.39□□□□□ -1.87
ATXN3-247ENST00000557311 H3BP45 60 aa3.39□□□□□ -1.87
ATXN3-247ENST00000557311 K7EIM0 57 aa3.39□□□□□ -1.87
ATXN3-247ENST00000557311 K7EQG2 157 aa3.39□□□□□ -1.87
ATXN3-247ENST00000557311 PEX7O00628 323 aa3.39□□□□□ -1.87
ATXN3-247ENST00000557311 MRPS12O15235 138 aaKnown RBP3.39□□□□□ -1.87
ATXN3-247ENST00000557311 IGKV3-20P01619 116 aa3.39□□□□□ -1.87
ATXN3-247ENST00000557311 RNASE2P10153 161 aaKnown RBP3.39□□□□□ -1.87
ATXN3-247ENST00000557311 WT1-ASQ06250 92 aa3.39□□□□□ -1.87
ATXN3-247ENST00000557311 CENPWQ5EE01 88 aa3.39□□□□□ -1.87
ATXN3-247ENST00000557311 C2orf82Q6UX34 121 aa3.39□□□□□ -1.87
ATXN3-247ENST00000557311 ZFP2Q6ZN57 461 aa3.39□□□□□ -1.87
ATXN3-247ENST00000557311 C17orf77Q96MU5 243 aa3.39□□□□□ -1.87
ATXN3-247ENST00000557311 METTL26Q96S19 204 aa3.39□□□□□ -1.87
ATXN3-247ENST00000557311 NDUFA4L2Q9NRX3 87 aa3.39□□□□□ -1.87
ATXN3-247ENST00000557311 IGKV1D-8A0A087WSZ0 117 aa3.38□□□□□ -1.87
ATXN3-247ENST00000557311 IGKV1D-13A0A0B4J2D9 117 aa3.38□□□□□ -1.87
ATXN3-247ENST00000557311 IGHV3-66A0A0C4DH42 116 aa3.38□□□□□ -1.87
ATXN3-247ENST00000557311 IGKV1-13P0DP09 117 aa3.38□□□□□ -1.87
ATXN3-247ENST00000557311 HTN3P15516 51 aa3.38□□□□□ -1.87
ATXN3-247ENST00000557311 Q5VSD8 79 aa3.38□□□□□ -1.87
ATXN3-247ENST00000557311 FP248Q71RG6 208 aaPredicted RBP3.38□□□□□ -1.87
ATXN3-247ENST00000557311 DCANP1Q8TF63 244 aa3.38□□□□□ -1.87
ATXN3-247ENST00000557311 Q9H8V8 135 aa3.38□□□□□ -1.87
ATXN3-247ENST00000557311 XCL2Q9UBD3 114 aa3.38□□□□□ -1.87
ATXN3-247ENST00000557311 UBR4Q5T4S7 5183 aa3.38□□□□□ -1.87
ATXN3-247ENST00000557311 TEX49A0A1B0GTD5 131 aa3.37□□□□□ -1.87
ATXN3-247ENST00000557311 I3L2K1 104 aa3.37□□□□□ -1.87
ATXN3-247ENST00000557311 LTAP01374 205 aa3.37□□□□□ -1.87
ATXN3-247ENST00000557311 UBE2D1P51668 147 aa3.37□□□□□ -1.87
ATXN3-247ENST00000557311 CCL18P55774 89 aa3.37□□□□□ -1.87
ATXN3-247ENST00000557311 FXYD4P59646 89 aa3.37□□□□□ -1.87
ATXN3-247ENST00000557311 RBM3P98179 157 aaKnown RBP3.37□□□□□ -1.87
ATXN3-247ENST00000557311 LAGE3Q14657 143 aa3.37□□□□□ -1.87
ATXN3-247ENST00000557311 FAM222AQ5U5X8 452 aa3.37□□□□□ -1.87
ATXN3-247ENST00000557311 PGLYRP4Q96LB8 373 aa3.37□□□□□ -1.87
ATXN3-247ENST00000557311 SLC50A1Q9BRV3 221 aa3.37□□□□□ -1.87
ATXN3-247ENST00000557311 CCL28Q9NRJ3 127 aa3.37□□□□□ -1.87
ATXN3-247ENST00000557311 FAT1Q14517 4588 aa3.37□□□□□ -1.87
ATXN3-247ENST00000557311 TRBV27A0A0K0K1C4 114 aa3.36□□□□□ -1.87
ATXN3-247ENST00000557311 A0A1B0GXF2 115 aa3.36□□□□□ -1.87
ATXN3-247ENST00000557311 CKS2P33552 79 aa3.36□□□□□ -1.87
ATXN3-247ENST00000557311 UBE2BP63146 152 aa3.36□□□□□ -1.87
ATXN3-247ENST00000557311 SS18Q15532 418 aa3.36□□□□□ -1.87
ATXN3-247ENST00000557311 VSIG2Q96IQ7 327 aa3.36□□□□□ -1.87
ATXN3-247ENST00000557311 CYSTM1Q9H1C7 97 aa3.36□□□□□ -1.87
ATXN3-247ENST00000557311 Q9H3A6 140 aa3.36□□□□□ -1.87
ATXN3-247ENST00000557311 ZNF492Q9P255 531 aa3.36□□□□□ -1.87
ATXN3-247ENST00000557311 LINC00588Q9Y4M8 146 aa3.36□□□□□ -1.87
ATXN3-247ENST00000557311 IGHV3OR16-12A0A075B7B8 117 aa3.35□□□□□ -1.87
ATXN3-247ENST00000557311 TMEM256-PLSCR3K7ERE1 68 aa3.35□□□□□ -1.87
ATXN3-247ENST00000557311 NDUFC1O43677 76 aa3.35□□□□□ -1.87
ATXN3-247ENST00000557311 ZNF73O43830 326 aaPredicted RBP3.35□□□□□ -1.87
ATXN3-247ENST00000557311 IGHV3-48P01763 117 aa3.35□□□□□ -1.87
ATXN3-247ENST00000557311 ARL14EPLP0DKL9 152 aa3.35□□□□□ -1.87
ATXN3-247ENST00000557311 IFI27P40305 119 aaPredicted RBP3.35□□□□□ -1.87
ATXN3-247ENST00000557311 ERHP84090 104 aaKnown RBP3.35□□□□□ -1.87
ATXN3-247ENST00000557311 GDF5OSQ5U4N7 250 aa3.35□□□□□ -1.87
ATXN3-247ENST00000557311 COX8CQ7Z4L0 72 aa3.35□□□□□ -1.87
ATXN3-247ENST00000557311 Q8N8P6 123 aa3.35□□□□□ -1.87
ATXN3-247ENST00000557311 TIMM17AQ99595 171 aa3.35□□□□□ -1.87
ATXN3-247ENST00000557311 NPCDR1Q9BY65 106 aa3.35□□□□□ -1.87
ATXN3-247ENST00000557311 TMEM167BQ9NRX6 74 aa3.35□□□□□ -1.87
ATXN3-247ENST00000557311 PRO1854Q9UHT4 67 aa3.35□□□□□ -1.87
ATXN3-247ENST00000557311 MYCBP2O75592 4640 aa3.35□□□□□ -1.87
ATXN3-247ENST00000557311 A0A1B0GUV1 79 aa3.34□□□□□ -1.87
ATXN3-247ENST00000557311 HIGD1CA8MV81 97 aa3.34□□□□□ -1.87
ATXN3-247ENST00000557311 PRAC2D3DTV9 90 aa3.34□□□□□ -1.87
ATXN3-247ENST00000557311 K7EMI3 77 aa3.34□□□□□ -1.87
ATXN3-247ENST00000557311 M0R378 163 aa3.34□□□□□ -1.87
ATXN3-247ENST00000557311 SMR3BP02814 79 aaPredicted RBP3.34□□□□□ -1.87
ATXN3-247ENST00000557311 CCKP06307 115 aa3.34□□□□□ -1.87
ATXN3-247ENST00000557311 COX6CP09669 75 aa3.34□□□□□ -1.87
ATXN3-247ENST00000557311 IAPPP10997 89 aa3.34□□□□□ -1.87
ATXN3-247ENST00000557311 SPANXN5Q5MJ07 72 aa3.34□□□□□ -1.87
ATXN3-247ENST00000557311 PAPPA-AS1Q5QFB9 102 aa3.34□□□□□ -1.87
ATXN3-247ENST00000557311 SFTA2Q6UW10 78 aa3.34□□□□□ -1.87
ATXN3-247ENST00000557311 SDIM1Q6ZPB5 146 aa3.34□□□□□ -1.87
ATXN3-247ENST00000557311 LCA10Q71F78 164 aa3.34□□□□□ -1.87
ATXN3-247ENST00000557311 FXYD5Q96DB9 178 aa3.34□□□□□ -1.87
ATXN3-247ENST00000557311 GFRA4Q9GZZ7 299 aa3.34□□□□□ -1.87
ATXN3-247ENST00000557311 IGKV2D-26A0A0A0MRZ7 120 aa3.33□□□□□ -1.88
ATXN3-247ENST00000557311 BCE1O60756 84 aa3.33□□□□□ -1.88
ATXN3-247ENST00000557311 PLNP26678 52 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 270 ms