RNA–Protein interactions for RNA: ENST00000556869.1

LINC00871-203, long intergenic non-protein coding RNA 871, humanhuman

TSL 2

Gene LINC00871, Length 456 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00871-203ENST00000556869 DIP2CQ9Y2E4 1556 aa-0.55□□□□□ -2.5
LINC00871-203ENST00000556869 NLRP1Q9C000 1473 aa-0.55□□□□□ -2.5
LINC00871-203ENST00000556869 STAB2Q8WWQ8 2551 aa-0.55□□□□□ -2.5
LINC00871-203ENST00000556869 CRYM-AS1A6NIL9 109 aa-0.56□□□□□ -2.5
LINC00871-203ENST00000556869 DEFB135Q30KP9 77 aa-0.56□□□□□ -2.5
LINC00871-203ENST00000556869 CCDC141Q6ZP82 1450 aa-0.56□□□□□ -2.5
LINC00871-203ENST00000556869 PLEKHH2Q8IVE3 1493 aa-0.56□□□□□ -2.5
LINC00871-203ENST00000556869 SAA2P0DJI9 122 aaPredicted RBP-0.57□□□□□ -2.5
LINC00871-203ENST00000556869 GNG4P50150 75 aa-0.57□□□□□ -2.5
LINC00871-203ENST00000556869 KRTAP19-8Q3LI54 63 aa-0.57□□□□□ -2.5
LINC00871-203ENST00000556869 CREBBPQ92793 2442 aa-0.58□□□□□ -2.5
LINC00871-203ENST00000556869 A0A1B0GU69 56 aa-0.58□□□□□ -2.5
LINC00871-203ENST00000556869 SPRR2AP35326 72 aa-0.58□□□□□ -2.5
LINC00871-203ENST00000556869 SNCAP37840 140 aa-0.58□□□□□ -2.5
LINC00871-203ENST00000556869 PPP3R1P63098 170 aa-0.58□□□□□ -2.5
LINC00871-203ENST00000556869 CRIPTQ9P021 101 aa-0.58□□□□□ -2.5
LINC00871-203ENST00000556869 IER3IP1Q9Y5U9 82 aa-0.58□□□□□ -2.5
LINC00871-203ENST00000556869 PAPPA2Q9BXP8 1791 aa-0.58□□□□□ -2.5
LINC00871-203ENST00000556869 NRKQ7Z2Y5 1582 aa-0.58□□□□□ -2.5
LINC00871-203ENST00000556869 NBEAL1Q6ZS30 2694 aa-0.59□□□□□ -2.5
LINC00871-203ENST00000556869 MRC2Q9UBG0 1479 aa-0.59□□□□□ -2.5
LINC00871-203ENST00000556869 A0A087WVE0 104 aa-0.59□□□□□ -2.5
LINC00871-203ENST00000556869 S100A1P23297 94 aa-0.59□□□□□ -2.5
LINC00871-203ENST00000556869 H1FX-AS1Q4G0G2 97 aa-0.59□□□□□ -2.5
LINC00871-203ENST00000556869 C6orf201Q7Z4U5 140 aa-0.59□□□□□ -2.5
LINC00871-203ENST00000556869 VAMP8Q9BV40 100 aa-0.59□□□□□ -2.5
LINC00871-203ENST00000556869 LINC00846Q9NV44 126 aa-0.59□□□□□ -2.5
LINC00871-203ENST00000556869 PDZD2O15018 2839 aa-0.59□□□□□ -2.5
LINC00871-203ENST00000556869 ARHGAP5Q13017 1502 aa-0.59□□□□□ -2.5
LINC00871-203ENST00000556869 PDCD11Q14690 1871 aaKnown RBP-0.6□□□□□ -2.51
LINC00871-203ENST00000556869 MARF1Q9Y4F3 1742 aaKnown RBP-0.6□□□□□ -2.51
LINC00871-203ENST00000556869 EIF4G3O43432 1585 aaKnown RBP-0.6□□□□□ -2.51
LINC00871-203ENST00000556869 A0A1B0GV90 55 aa-0.6□□□□□ -2.51
LINC00871-203ENST00000556869 I3L3M4 83 aa-0.6□□□□□ -2.51
LINC00871-203ENST00000556869 DLEU1O43261 78 aa-0.6□□□□□ -2.51
LINC00871-203ENST00000556869 KRTDAPP60985 99 aa-0.6□□□□□ -2.51
LINC00871-203ENST00000556869 KRTAP6-2Q3LI66 62 aa-0.6□□□□□ -2.51
LINC00871-203ENST00000556869 PRKDCP78527 4128 aaKnown RBP-0.6□□□□□ -2.51
LINC00871-203ENST00000556869 CC2D2AQ9P2K1 1620 aa-0.6□□□□□ -2.51
LINC00871-203ENST00000556869 NKTRP30414 1462 aaKnown RBP-0.61□□□□□ -2.51
LINC00871-203ENST00000556869 KMT2CQ8NEZ4 4911 aaKnown RBP-0.61□□□□□ -2.51
LINC00871-203ENST00000556869 PKHD1P08F94 4074 aa-0.61□□□□□ -2.51
LINC00871-203ENST00000556869 C7orf77A4D0Y5 90 aa-0.61□□□□□ -2.51
LINC00871-203ENST00000556869 TMEM262E9PQX1 116 aa-0.61□□□□□ -2.51
LINC00871-203ENST00000556869 H3BQ15 152 aa-0.61□□□□□ -2.51
LINC00871-203ENST00000556869 NEBP20929 6669 aa-0.61□□□□□ -2.51
LINC00871-203ENST00000556869 HERC1Q15751 4861 aa-0.61□□□□□ -2.51
LINC00871-203ENST00000556869 EDC4Q6P2E9 1401 aaKnown RBP-0.62□□□□□ -2.51
LINC00871-203ENST00000556869 PCLOQ9Y6V0 5065 aa-0.62□□□□□ -2.51
LINC00871-203ENST00000556869 MAPKBP1O60336 1514 aa-0.62□□□□□ -2.51
LINC00871-203ENST00000556869 SETD2Q9BYW2 2564 aaPredicted RBP-0.62□□□□□ -2.51
LINC00871-203ENST00000556869 EFCAB10A6NFE3 127 aa-0.62□□□□□ -2.51
LINC00871-203ENST00000556869 H3BQF6 201 aa-0.62□□□□□ -2.51
LINC00871-203ENST00000556869 CORTO00230 105 aa-0.62□□□□□ -2.51
LINC00871-203ENST00000556869 HSD52Q0P140 79 aa-0.62□□□□□ -2.51
LINC00871-203ENST00000556869 CGREF1Q99674 301 aa-0.62□□□□□ -2.51
LINC00871-203ENST00000556869 GNG8Q9UK08 70 aa-0.62□□□□□ -2.51
LINC00871-203ENST00000556869 SPHKAPQ2M3C7 1700 aa-0.62□□□□□ -2.51
LINC00871-203ENST00000556869 PZPP20742 1482 aa-0.62□□□□□ -2.51
LINC00871-203ENST00000556869 ZFHX3Q15911 3703 aa-0.63□□□□□ -2.51
LINC00871-203ENST00000556869 SVEP1Q4LDE5 3571 aa-0.63□□□□□ -2.51
LINC00871-203ENST00000556869 CHD1O14646 1710 aa-0.63□□□□□ -2.51
LINC00871-203ENST00000556869 KNDC1Q76NI1 1749 aa-0.63□□□□□ -2.51
LINC00871-203ENST00000556869 FLGP20930 4061 aaPredicted RBP-0.63□□□□□ -2.51
LINC00871-203ENST00000556869 hADV29S1A0JD25 119 aa-0.63□□□□□ -2.51
LINC00871-203ENST00000556869 GNGT1P63211 74 aa-0.63□□□□□ -2.51
LINC00871-203ENST00000556869 DEFB112Q30KQ8 113 aa-0.63□□□□□ -2.51
LINC00871-203ENST00000556869 DEFB107AQ8IZN7 70 aa-0.63□□□□□ -2.51
LINC00871-203ENST00000556869 C9orf62Q8N4C0 152 aa-0.63□□□□□ -2.51
LINC00871-203ENST00000556869 TOPAZ1Q8N9V7 1692 aa-0.63□□□□□ -2.51
LINC00871-203ENST00000556869 ANKRD36A6QL64 1941 aa-0.64□□□□□ -2.51
LINC00871-203ENST00000556869 A0A0G2JND7 137 aa-0.64□□□□□ -2.51
LINC00871-203ENST00000556869 H0Y9P7 68 aa-0.64□□□□□ -2.51
LINC00871-203ENST00000556869 SPRR2EP22531 72 aa-0.64□□□□□ -2.51
LINC00871-203ENST00000556869 GTF2H5Q6ZYL4 71 aa-0.64□□□□□ -2.51
LINC00871-203ENST00000556869 LRRC37AA6NMS7 1700 aa-0.64□□□□□ -2.51
LINC00871-203ENST00000556869 MAP1AP78559 2803 aaPredicted RBP-0.65□□□□□ -2.51
LINC00871-203ENST00000556869 ASIPP42127 132 aa-0.65□□□□□ -2.51
LINC00871-203ENST00000556869 MRPS10P82664 201 aaKnown RBP-0.65□□□□□ -2.51
LINC00871-203ENST00000556869 PSMG4Q5JS54 123 aa-0.65□□□□□ -2.51
LINC00871-203ENST00000556869 HEPN1Q6WQI6 88 aa-0.65□□□□□ -2.51
LINC00871-203ENST00000556869 TMEM203Q969S6 136 aa-0.65□□□□□ -2.51
LINC00871-203ENST00000556869 MRPL34Q9BQ48 92 aaKnown RBP-0.65□□□□□ -2.51
LINC00871-203ENST00000556869 TARBP1Q13395 1621 aaKnown RBP-0.65□□□□□ -2.51
LINC00871-203ENST00000556869 ABCA3Q99758 1704 aa-0.66□□□□□ -2.51
LINC00871-203ENST00000556869 TRAV30A0A087WSZ9 112 aa-0.66□□□□□ -2.52
LINC00871-203ENST00000556869 ARMS2P0C7Q2 107 aa-0.66□□□□□ -2.52
LINC00871-203ENST00000556869 PMCHL1Q16048 86 aa-0.66□□□□□ -2.52
LINC00871-203ENST00000556869 CACFD1Q9UGQ2 172 aa-0.66□□□□□ -2.52
LINC00871-203ENST00000556869 COL14A1Q05707 1796 aaKnown RBP-0.66□□□□□ -2.52
LINC00871-203ENST00000556869 COL4A6Q14031 1691 aa-0.66□□□□□ -2.52
LINC00871-203ENST00000556869 KIAA1551Q9HCM1 1747 aa-0.67□□□□□ -2.52
LINC00871-203ENST00000556869 SLIT1O75093 1534 aa-0.67□□□□□ -2.52
LINC00871-203ENST00000556869 CCL22O00626 93 aa-0.67□□□□□ -2.52
LINC00871-203ENST00000556869 CUX1P39880 1505 aa-0.68□□□□□ -2.52
LINC00871-203ENST00000556869 SHPRHQ149N8 1683 aa-0.68□□□□□ -2.52
LINC00871-203ENST00000556869 TRBV25-1A0A075B6N4 114 aa-0.68□□□□□ -2.52
LINC00871-203ENST00000556869 SPTY2D1-AS1A0A0U1RR47 76 aa-0.68□□□□□ -2.52
LINC00871-203ENST00000556869 H0YGG7 62 aa-0.68□□□□□ -2.52
LINC00871-203ENST00000556869 GNGT2O14610 69 aa-0.68□□□□□ -2.52
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms